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J. Biol. Chem., Vol. 279, Issue 49, 50717-50725, December 3, 2004
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From the
Department of Plant Physiology, Ruhr-Universität, Universitätsstrasse 150, 44801 Bochum, Germany and ¶Plant Physiology, Center for Plant Molecular Biology, University of Tübingen, Auf der Morgenstelle 5, 72076 Tübingen, Germany
Received for publication, July 8, 2004 , and in revised form, September 3, 2004.
| ABSTRACT |
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| INTRODUCTION |
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In plants, sulfate groups occur in a number of secondary metabolites, notably the sulfoflavonoids (6) and the glucosinolates (7). Glucosinolates (GSs) are secondary compounds found in at least 16 different plant families, 15 of which belong to the order Capparales (for review, see Ref. 8). Within this order, much interest has been directed to the Brassicaceae family: the genus Brassica alone contains a large number of agriculturally important crops, including many vegetables (e.g. broccoli, Brussels sprouts, cauliflower, and cabbage) and one of the most important oilseed crops, oilseed rape (B. napus), the defatted seed meal of which is fed to animals. GSs in edible species or seed meal have attracted much attention because their breakdown products have been described to have anticancer but also goitrogenic and anti-nutritional activities.
Although many functions such as sulfur and nitrogen storage have been assigned to GSs, defense against herbivores and pathogens seems to be their main function. Upon wounding, GSs are hydrolyzed by a thioglucosidase called myrosinase, and the released unstable aglycons rearrange to form isothiocyanates, thiocyanates, nitriles, and other compounds, the production of which depends on the GS itself, the reaction conditions, and the presence of certain cofactors (for review, see Ref. 9). These compounds have antimicrobial activity and are toxic or deterrent to non-specialist herbivores.
Much progress has been made recently in identifying the gene products involved in the biosynthesis of GSs (Fig. 1): aldoxime-forming and aldoxime-oxidizing cytochrome P450 enzymes characterized by different substrate specificities have been identified (1019). C-S lyase, the enzyme catalyzing the subsequent step in GS biosynthesis, was identified recently as the SUPERROOT1 gene product (SUR1) (20), and the gene encoding UDP-glucose:thiohydroximate glycosyltransferase was cloned from B. napus (21). The final step in the biosynthesis of the GS core structure is catalyzed by a desulfoglucosinolate:PAPS sulfotransferase (dsGS-ST), transferring the sulfate moiety from PAPS to the desulfoglucosinolate (dsGS). The enzymatic activity of dsGS-STs has been analyzed in partially purified protein fractions from Brassica juncea and cress (Lepidium sativum) (22, 23). The enzymes have similar biochemical characteristics with respect to native molecular mass, isoelectric point, pH, and temperature optima as well as inhibition by various sulfhydryl group reagents. Furthermore, the enzyme from cress was found to prefer desulfobenzylglucosinolate over desulfosinigrin. However, the corresponding proteins have not been purified to homogeneity; and until now, genes encoding dsGS-STs have not been identified. Here, we report the cloning and functional expression of a small family of such desulfoglucosinolate-specific sulfotransferases from A. thaliana.
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| EXPERIMENTAL PROCEDURES |
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Plant MaterialA. thaliana ecotypes C24 and Col-0 were grown in a greenhouse. Prior to treatment, plants were transferred to a phytotron chamber (8-h photoperiod at 20 °C and 150 µmol of photons (400700 nm) cm2 s1; 16 h of darkness at 18 °C; 70% relative humidity) for at least 3 days.
Treatment of PlantsWounding was done using a hemostat and crushing across
80100% of the area of a specific leaf. The leaves of one-half of a rosette were treated in this way; the opposite half of the rosette was left undamaged to allow differentiation of local and systemic effects. Application of compounds dissolved in 40% (v/v) acetone and 0.1% (v/v) Tween 20 was performed by spraying plant rosettes until leaves were wet. Control plants were treated with the solvent alone. Plant material was frozen in liquid nitrogen immediately after harvesting.
General Molecular Biological and Biochemical MethodsIf applicable, the standard protocols of Ausubel et al. (26) and Sambrook and Russell (27) were used. Plant RNA was prepared according to Barkan (28). Ten micrograms of total RNA were separated on formaldehyde-agarose gels, transferred onto nylon membranes, and hybridized with a radiolabeled probe using standard laboratory procedures. The probe for AtST5a mRNA corresponded to nucleotides 22470 of the AtST5a cDNA. cDNA synthesis, PCR amplification, and DNA restriction and ligation followed the manufacturers' protocols.
Semiquantitative Reverse Transcription (RT)-PCRSemiquantitative RT-PCR was done using the cMaster RTplus PCR system (Eppendorf, Wesseling-Berzdorf, Germany) following the manufacturer's instructions. Contaminating DNA in the RNA preparations was digested with the RQ1 RNase-free DNase (Promega, Mannheim, Germany). This step was critical because the AtST5 genes contain no introns, and amplification could therefore result from genomic DNA. Absence of DNA after digestion was confirmed by PCR using the RNA as template. Specificities of AtST5 primers were tested using the respective plasmid DNA as template. RT-PCR conditions were as follows: 94 °C for 5 min; 2530 cycles at 94 °C for 30 s, 55 °C for 45 s, and 72 °C for 60 s; followed by a final extension at 72 °C for 10 min. After electrophoretic separation, PCR products were visualized by ethidium bromide staining and quantified using the TINA 2.0 program (Raytest, Straubenhardt, Germany). The data were normalized to signals obtained by RT-PCR of the actin-1 gene.
Cloning and Bacterial Expression of cDNAs Encoding Selected Sulfotransferases from ArabidopsisThe AtST1 cDNA (plasmid pRaR047) was kindly provided by Dr. D. Roby (Centre National de la Recherche Scientifique/Institut National de la Recherche Agronomique, Castanet-Tolosan, France) (5). The AtST5a gene was originally identified by differential mRNA display as a coronatine-induced gene (CORI-7) in A. thaliana (29). The cDNA fragment obtained encompassed 514 bp and was identified to be part of the Arabidopsis expressed sequence tag clone OBO154 (GenBankTM/EBI accession number F14418 [GenBank] ). Nevertheless, this 1165-bp expressed sequence tag clone still displayed an incomplete 5'-end. The missing sequence was generated by 5'-rapid amplification of cDNA ends/PCR (30) using cDNA from coronatine (5 µM, 2 h)-treated plants as template. Meanwhile, the corresponding genomic sequence of AtST5a (AGI code At1g74100) was obtained within the scope of the Arabidopsis Genome Project.
For expression of Arabidopsis sulfotransferases as N-terminally RGS-His6-tagged proteins in Escherichia coli M15, the corresponding cDNA regions were amplified from plasmid templates (among others, the pUNI51 clones U50569 [GenBank] and U50309 [GenBank] , containing the cDNAs encoding AtST5b and AtST5c, respectively) by PCR and cloned into pQE-30 (QIAGEN, Hilden, Germany) using the KpnI/PstI (AtST5a) and BamHI/SalI (AtST1, AtST5b, and AtST5c) restriction sites.2 The recombinant RGS-His6-tagged proteins were purified under native conditions using nickel-nitrilotriacetic acid-agarose according to the manufacturer's protocol (QIAGEN). The eluted protein was immediately desalted using Sepharose G-25 (PD-10 columns, Amersham Biosciences) preequilibrated with 50 mM Tris (pH 7.0) and 1 mM dithiothreitol, shock-frozen in liquid nitrogen, and stored at 80 °C.
Assay for Sulfotransferase ActivityAssays for sulfotransferase activity of the recombinant proteins were performed at 30 °C in a total volume of 100 µl of 50 mM potassium phosphate buffer (pH 7.0) containing PAPS (20200 µM), substrate (20200 µM dsGS), and purified protein (10 µg). dsGSs were extracted from the leaves and seeds of A. thaliana ecotypes Col-0 and C24 and purified by HPLC as described below. Controls were identical but contained no protein. The reactions were stopped by the addition of 300 µl of ice-cold methanol to precipitate the protein. At that point, protein was also added to the controls to ensure comparable conditions between samples and controls in the subsequent steps. After 2 h at 80 °C, the precipitated protein was collected by centrifugation, and the supernatant was taken to dryness and subsequently resuspended in 100 µl of water. Insoluble material was precipitated by an additional centrifugation, and the resulting supernatant was analyzed by reverse-phase HPLC. HPLC was performed on a Hyperclone 5µ BDS C181 (1 x 250 mm; Phenomenex, Aschaffenburg, Germany) using a LaChrom Elite HPLC workstation equipped with a diode array detector (VWR International, Darmstadt, Germany). HPLC conditions were as described elsewhere (31).
Preparation and Analysis of Glucosinolates in A. thalianaExtraction of GSs from plant material and purification as dsGSs were performed as described by Brown et al. (32). For quantification, 1.25 µmol of benzylglucosinolate were added as an internal standard at the beginning of the extraction procedure. dsGSs were separated by HPLC as described (31). Individual dsGSs were identified by their UV-visible spectra and quantified by comparison with the internal standard. These values were corrected for the response factors for the different dsGSs. A list of these response factors is given by Brown et al. (32).
| RESULTS |
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Enzymes of the AtST5 Subfamily Are Functional Desulfoglucosinolate SulfotransferasesThe cDNAs for the AtST5 enzymes were cloned into the pQE-30 vector for bacterial expression of N-terminally His6-tagged proteins. The proteins could be purified under native conditions by Ni2+ chelate affinity chromatography (Fig. 4). For comparison, the cDNA for AtST1 (RaR047, encoded by At2g03760), a sulfotransferase also described to be up-regulated by jasmonic acid (5), was cloned and expressed in the same manner. In initial experiments, a range of known sulfotransferase substrates were tested using recombinant AtST5a. However, sulfation of quercetin, 17
-estradiol, brassinolide, 24-epibrassinolide, castasterone, 24-epicastasterone, and 11- and 12-hydroxyjasmonic acid could not be observed. Thus, it was considered unlikely that these or structurally similar compounds are potential substrates in vivo. Since GS levels increase in members of the Brassicaceae family after wounding and jasmonate treatment (e.g. Refs. 3739) we considered dsGSs, the immediate precursors of GSs, as possible substrates. Upon incubation of the AtST5 enzymes with a mixture of several dsGSs (total amount of 14 nmol) in the presence of 2 nmol of PAPS, turnover of dsGSs was observed, while at the same time, the formation of new substances could be detected (Fig. 5A and Table II). To investigate whether these products are indeed GSs, the reaction product formed from indole-3-methyl (I3M)-dsGS (desulfoglucobrassicin) by AtST5a was purified by HPLC and further analyzed by electrospray ionization time-of-flight mass spectrometry. The relative molecular mass of the product in negative ion mode was 447.0515, which is a deviation of 3.8 ppm from the expected relative molecular mass of glucobrassicin (M H+, 447.0532) and therefore within the specification of the mass spectrometer used (5 ppm). The collision-induced dissociation tandem mass spectra of the product in positive and negative ion mode were in accordance (peak patterns and relative intensities) with the data obtained from synthetic [13C2]glucobrassicin (Fig. 6A).
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AtST1 (RaR047) showed no activity toward dsGSs. AtST1 is an ortholog of the steroid sulfotransferase BnSST3 from B. napus (Fig. 2). BnSST3 is known to sulfate certain brassinosteroids (2); it seems therefore likely that AtST1 is also a steroid sulfotransferase.
Substrate Specificity of dsGS-STsWhen incubated with a mixture of dsGSs (derived from the amino acids methionine, phenylalanine, and tryptophan) in the presence of approximately equimolar amounts of PAPS (15 nmol of PAPS versus 14 nmol of total dsGSs), all three dsGS-STs were able to sulfate different types of dsGSs, albeit with different preferences (Fig. 5B). These substrate specificities became more obvious when limited amounts of PAPS (2 nmol) were applied (Fig. 5C): AtST5a clearly prefers dsGSs derived from aromatic amino acids, viz. I3M-dsGS and, to a lesser extent, benzyl-dsGS, whereas AtST5b and AtST5c prefer methionine-derived dsGS. The substrate specificities were further characterized by comparing substrate pairs; the preferred substrate for each enzyme was incubated simultaneously with a second dsGS (Table III). Again, the data emphasized the preference of AtST5a for I3M-dsGS. The substrate specificities for AtST5b and AtST5c are similar but clearly distinguishable. The favorite substrate identified for AtST5b is 7-methylthioheptyl-dsGS, whereas AtST5c prefers 8MTO-dsGS. Furthermore, additional potential substrates could be identified by incubating the enzymes with dsGS mixtures isolated from leaves or seeds of A. thaliana ectotypes Col-0 (leaves) and C24 (leaves and seeds). Through these experiments, the following dsGSs were shown to become sulfated: 3-methylthiopropyl-, 3-methylsulfinylpropyl-, 4-methylsulfinylbutyl-, (S)-2-hydroxy-3-butenyl-, 5-methylthiopentyl-, 5-methylsulfinylpentyl-, 6-methylthiohexyl-, and 7-methylsulfinylheptyl-dsGSs (data not shown).
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Effect of Coronatine on Glucosinolate BiosynthesisIt is known that treatment of A. thaliana, Sinapis alba, B. juncea, B. napus, and Brassica rapa with jasmonic acid leads to an increase in indole-derived GSs (e.g. Refs. 38, 39, and 4244). Because coronatine is proposed to be a structural analog of jasmonic acid and/or 12-oxophytodienoic acid, we analyzed the effect of the phytotoxin on GS biosynthesis in A. thaliana ecotype Col-0. The contents of the individual GSs found in control plants were in good agreement with recently published data (31, 32) with the exception of glucobrassicin (I3M-GS), the content of which was consistently
2-fold higher in our experiments than described in the literature (data not shown). This increase was not due to spraying (40% (v/v) acetone and 0.1% Tween 20) because untreated plants showed the same level of I3M-GS. Application of coronatine resulted in a 23-fold increase in the amount of I3M-GS and a 57-fold increase in the amount of neoglucobrassicin (N-methoxyindole-3-methyl-GS) after 24 h and an additional slight increase after 48 h, whereas the amount of the other GSs (including tryptophan-derived 4-methoxyindole-3-methyl-GS) was either unchanged or only marginally affected (Fig. 7). Qualitatively comparable results were obtained after MeJA treatment (Fig. 7) (44), indicating that both compounds, although at different concentrations (5 µM coronatine versus 250 µM MeJA), affect the biosynthesis of I3M-GS and N-methoxyindole-3-methyl-GS in a similar manner.
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| DISCUSSION |
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Not only are AtST5b and AtST5c phylogenetically more closely related to each other compared with AtST5a, they additionally show similar substrate specificities. Both enzymes prefer long chain dsGSs derived from methionine, whereas AtST5a clearly prefers dsGSs derived from the aromatic amino acids tryptophan and phenylalanine. Tryptophan-derived I3M-GS (glucobrassicin) is present in relatively high concentrations in A. thaliana throughout the whole life cycle, whereas phenylalanine-derived GSs are only barely detectable in many ecotypes of A. thaliana (11, 31, 32, 45). Thus, the proposed function of AtST5a in vivo is biosynthesis of I3M-GS. However, it should be noted that all three AtST5 enzymes are capable of converting a wide range of different dsGSs; and hence, they do not show strict substrate specificities (Fig. 5 and Table III). Therefore, biosynthesis of specific GSs seems to be regulated at the pre-sulfotransferase level. For example, the preferred substrates for AtST5b and AtST5c, viz. 7-methylthioheptyl-dsGS and 8MTO-dsGS, respectively, are present only in small amounts in the leaves of A. thaliana ecotype Col-0, whereas the main GS in this tissue is 4-methylsulfinylbutyl-GS. 4-Methylsulfinylbutyl-GS is derived from 4-methylthiobutyl-GS, the dsGS of which is a reasonably good substrate for AtST5b and AtST5c, too. Further experiments using plants in which single dsGS-ST genes are knocked out will provide evidence regarding functional redundancy.
Coronatine treatment of plants resulted in a specific increase in tryptophan-derived I3M-GS and N-methoxyindole-3-methyl-GS (Fig. 7), whereas at the same time, the genes coding for AtSt5a and AtST5c were up-regulated (Fig. 3C). This again points to a pre-sulfotransferase regulation of GS biosynthesis. It is already known that the aldoxime-forming enzymes CYP79B2, CYP79B3, CYP79F1, and CYP79F2, which are involved in the biosynthesis of tryptophan-derived GSs (CYP79B2 and CYP79B3) and methionine-derived GSs (CYP79F1 and CYP79F2), are up-regulated by treatment with MeJA (44). The fact that methionine-derived GSs are still only slightly affected by MeJA and coronatine indicates that their biosynthesis is substrate-limited, very likely at the level of chain elongation. Because tryptophan does not undergo chain elongation before entering the GS biosynthetic pathway, it could readily be consumed by CYP79B2 and CYP79B3.
One step in GS biosynthesis is catalyzed by a C-S lyase. Interestingly, one additional gene identified as up-regulated by coronatine, CORI-3, encodes a C-S lyase, initially annotated as tyrosine aminotransferase (29, 46). Although the C-S lyase involved in GS biosynthesis was identified as the SUPERROOT1 gene product, which is not identical to CORI-3 (20), the possibility that CORI-3 may be involved in I3M-GS biosynthesis induced by coronatine or MeJA cannot be ruled out.
| FOOTNOTES |
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To whom correspondence should be addressed. Tel.: 49-234-322-4291; Fax: 49-234-321-4187; E-mail: Elmar.Weiler{at}ruhr-unibochum.de.
1 The abbreviations used are: PAPS, 3'-phosphoadenosine 5'-phosphosulfate; GS, glucosinolate; dsGS, desulfoglucosinolate; dsGS-ST, desulfoglucosinolate:PAPS sulfotransferase; RT, reverse transcription; HPLC, high performance liquid chromatography; MeJA, jasmonic acid methyl ester; I3M, indole-3-methyl; 8MTO, 8-methylthiooctyl. ![]()
2 Primer sequences are available upon request. ![]()
3 M. Klein, J. Tokuhisa, M. Reichelt, J. Gershenzon, and J. Papenbrock (2004) Poster abstract T07-043 presented at the 15th International Conference on Arabidopsis Research, July 1114, 2004, Berlin, Germany. ![]()
| ACKNOWLEDGMENTS |
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ner, and S. Schönfelder for excellent technical assistance. M. P and T. J. are grateful to Drs. M. Reichelt and J. Gershenzon (Max Planck Institute of Chemical Ecology, Jena, Germany) for the introduction to glucosinolate analysis. | REFERENCES |
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