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J. Biol. Chem., Vol. 279, Issue 49, 51163-51171, December 3, 2004
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From the
Transcription and Disease Laboratory and **Molecular Virology Laboratory, Molecular Biology and Genetics Unit, Jawaharlal Nehru Centre for Advanced Scientific Research, Jakkur, Bangalore, 560064, India
Received for publication, August 6, 2004 , and in revised form, September 20, 2004.
| ABSTRACT |
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| INTRODUCTION |
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Histone acetyltransferases (HATs)1 modulate gene expression by catalyzing targeted acetylation of the
-amino group of lysine residues on histones and nonhistone proteins. HATs can be classified into several families based on the number of highly conserved structural motifs. These include the GNAT family (Gcn5-related N-acetyltransferase; e.g. Gcn5, PCAF), the MYST (MOZ, YBF2/SAS3, and TIP60) group, and the p300/CBP family (4, 6). The p300 and CBP are ubiquitously expressed global transcriptional coactivators that have critical roles in a wide variety of cellular phenomena including cell cycle control, differentiation, and apoptosis (7, 8). The transcriptional coactivator function of these two proteins is partially facilitated by their intrinsic HAT activity (9). Significantly, p300/CBP also acetylates several nonhistone proteins with functional consequences. The most notable example is the acetylation of p53. p300/CBP directly interacts with p53 and acetylates the tumor suppressor in vivo and in vitro to enhance its transcriptional activation ability (4, 10) and consequently DNA repair. Mutation in the HAT active site abolishes transactivation capability of p300/CBP (11). Analysis of colorectal, gastric, and epithelial cancer samples show that in several instances, there is a mis-sense mutation as well as deletion mutations in the p300 gene (12). 80% of glioblastoma cases have been associated with the loss of heterozygosity of the p300 gene (13). In acute myeloid leukemia, the gene for CBP is translocated and fused to either the monocytic leukemia zinc finger (MOZ) gene or to MLL (a homeotic regulator, mixed lineage leukemia). In both cases, the HAT activity of CBP remains intact. However, the fusion proteins cause aberrant gene expression through improper targeting of the genes. Retention of partial HAT function by the fusion protein may result in the altered regulation of the target gene, whereas a loss of function of the fusion protein may result in the normal gene not being transcribed at all. In either case, this results in aberrant cell cycle regulation, leading to cancer (4). Mutations in HATs cause several other disorders apart from cancer. Rubinstein-Taybi syndrome has been found to be a result of mutations in CBP. A single mutation at the PHD-type zinc finger in the HAT domain of CBP, resulting in an alteration of a conserved amino acid (E1278K), causes this syndrome. It is interesting that this mutation in CBP also abolishes its HAT activity (14, 15). The degradation of p300/CBP is also found to be associated with certain neurodegenerative diseases (16). Though the role of HAT activity in cardiac hypertrophy is still speculative, overexpression of p300 is sufficient to induce hypertrophy. The HAT domain of p300 was found to be essential for the stimulation of hypertrophy (17). Hyperacetylation of histones was also observed in the lung cells under asthmatic conditions (17). Chromatin analysis of the HIV genome shows that a single nucleosome (nuc-1) located at the transcription start site is specifically disrupted during transcriptional activation. Treatment of the cell lines latently infected with HIV-1 with histone deacetylase inhibitors (e.g. trichostatin A/trapoxin/valproic acid) causes a global acetylation of the cellular histones. Therefore, this treatment also results in the transcriptional activation of the HIV promoter and a robust increase in virus production (18, 19). Furthermore, recruitment of HDAC1 near nuc-1 by host factors YY1 and LSF to the HIV-1 long terminal repeat have been shown to inhibit transcription by maintaining nuc-1 in the hypoacetylated state (20, 21). Taken together, these data establish the fact that histone acetylation of nuc-1 is at least partly essential for the multiplication of HIV-1. Acetylation of the HIV-1 transactivator Tat by p300, PCAF, and human GCN5 has also been demonstrated to be important for HIV transcriptional activity (2224; reviewed in Ref. 25). Therefore, both HAT and HDAC modulators (activator/inhibitor) could serve as new generation anti-HIV therapeutics.
Significant progress has been made in the field of histone deacetylase inhibitors as antineoplastic drugs and also against cardiac hypertrophy. However, very few inhibitors of histone acetyltransferases are known so far. Availability of recombinant HATs made it possible to synthesize and test more target-specific inhibitors, Lys-CoA for p300 and H3-CoA-20 for PCAF (26). Although it has been extensively employed for in vitro transcription studies, cells are not permeable to Lys-CoA (27). Recently, we have isolated the first naturally occurring HAT inhibitor, anacardic acid, from cashew nut shell liquid and garcinol from Garcinia indica, which are nonspecific inhibitors of p300/CBP and PCAF but are capable of easily permeating the cells in culture (28, 29). Different chemical modifications of these inhibitors were attempted to identify enzyme-specific inhibitors, but it serendipitously led to the synthesis of the only known p300-specific activator, N-(4-chloro-3-trifluoromethylphenyl)-2-ethoxy-6-pentadecyl-benzamide. Herein, we describe the discovery of curcumin as the first p300/CBP-specific cell permeable HAT inhibitor. We have shown that it does not affect the HAT activity of PCAF or histone deacetylase and methyltransferase activities. However, p300 HAT activity-dependent chromatin transcription was efficiently repressed by curcumin but not transcription from DNA template. It could also inhibit the acetylation of histones in vivo. Significantly, curcumin repressed the multiplication of human immunodeficiency virus 1 (HIV1) and also inhibited the acetylation of HIV-Tat protein.
| EXPERIMENTAL PROCEDURES |
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Histone Acetyltransferase AssayHAT assays were performed as described previously (30). 2.4 µg of highly purified HeLa core histones were incubated in HAT assay buffer containing 50 mM Tris-HCl, pH 8.0, 10% (v/v) glycerol, 1 mM dithiothreitol, 1 mM phenylmethylsulfonyl fluoride, 0.1 mM EDTA, pH 8.0, and 10 mM sodium butyrate at 30 °C for 10 min with or without baculovirus-expressed recombinant p300/CBP or PCAF in the presence and absence of curcumin followed by addition of 1 µl of 4.7 Ci/mmol [3H]acetyl CoA and were further incubated for another 10 min in a 30-µl reaction. The reaction mixture was then blotted onto P-81 (Whatman) filter paper, and radioactive counts were recorded on a PerkinElmer Wallac 1409 liquid scintillation counter. The radiolabeled acetylated histones were visualized by resolving on 15% SDS-polyacrylamide gel and subjected to fluorography followed by autoradiography.
Histone Methyltransferase and Deacetylase AssaysHistone methyltransferase assays were performed in a 30-µl reaction. The reaction mixtures containing 20 mM Tris, 4 mM EDTA, pH 8.0, 200 mM NaCl, and 2 µl (
8 µg of protein/µl) HeLa nuclear extract or 2 µg of bacterially expressed HMTase domain of G9a fused to GST (31) were incubated in the presence or absence of curcumin for 10 min at 30 °C. After the initial incubation, 1 µl of 8.3 Ci/mmol [3H](S)-adenosyl methionine was added to the reaction mixtures, and the incubation continued for 1 h (in the case of nuclear extract) or for 15 min (in the case of G9a). The reaction products were TCA-precipitated, resolved on 15% SDS-PAGE, and subjected to fluorography followed by autoradiography.
For the deacetylation assays, histones were acetylated by the recombinant p300 (20 ng) using 2.4 µg of core histones and 1 µl of 4.7 Ci/mmol [3H]acetyl CoA in HAT assay buffer without sodium butyrate for 30 min at 30 °C (29). The activity of p300 was inhibited by incubating the reaction mixture with a 5 µM concentration of the p300-specific inhibitor lysyl-CoA (20) for 15 min at 30 °C, after which 50 ng of baculovirus-expressed recombinant HDAC1 was added in the presence or absence of curcumin and incubated further for 45 min at 30 °C. The samples were processed as described above.
In Vitro Chromatin AssemblyChromatin template for in vitro transcription experiments was assembled and characterized as described earlier (9).
In Vitro Transcription AssayTranscription assays were carried out as described elsewhere (9) with the necessary modifications. The schematic representation of the in vitro transcription protocol is given in Fig. 4A. The reconstituted chromatin template (containing 30 ng of DNA) or an equimolar amount of histone-free DNA was incubated with 50 ng of activator (Gal4-VP16) in a buffer containing 4 mM HEPES, pH 7.8, 20 mM KCl, 2 mM dithiothreitol, 0.2 mM phenylmethylsulfonyl fluoride, 10 mM sodium butyrate, 0.1 mg/ml bovine serum albumin, and 2% glycerol. Baculovirus-expressed recombinant full-length p300 was preincubated with indicated amounts of curcumin at 20 °C for 20 min, after which it was added to the transcription reaction, and the acetylation reaction was carried out for 30 min at 30 °C. HeLa nuclear extract (5 µl, which contains 8 mg/ml protein) was added then to initiate the preinitiation complex formation. Transcription reaction was started by the addition of NTP-mix and [
-32P]UTP after the preinitiation complex formation and incubated for 40 min further at 30 °C. For loading control, a separate reaction was set up with
25 ng of supercoiled ML200 DNA, and the transcription assay was carried out as described above, without the addition of the activator (Gal4-VP16), and 2 µl of this reaction was added to each of the transcription reactions. Reactions were terminated by the addition of 250 µl of stop buffer (20 mM Tris-HCl, pH 8.0, 1 mM EDTA, 100 mM NaCl, 1% SDS, and 0.025 ng/µl tRNA). Transcripts were analyzed by 5% Urea-PAGE, and quantification of transcription was done with the use of the Fujix Bioimaging Analyzer. To visualize the transcripts, the gels were exposed on x-ray film.
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For Western blotting, the quantitated protein samples were run on a 12% SDS-polyacrylamide gel; after electrophoresis, proteins on the gel were electrotransferred onto an Immobilon membrane (polyvinylidene difluoride; Millipore Corp., Bedford, MA). The membranes were then blocked in 5% nonfat dry milk solution in 1x PBS containing 0.05% Tween 20 and then immunoblotted with anti-acetyl H3 (Calbiochem), anti-acetyl H4 (a kind gift from Dr. Alaine Verrault), or anti-H3. Detection was performed using goat anti-rabbit secondary antibody (Bangalore Genei), and bands were visualized with the use of the ECL detection system (Pierce).
Apoptosis AssayCurcumin-induced apoptosis was monitored by the extent of nuclear fragmentation. Nuclear fragmentation was visualized by Hoechst staining of apoptotic nuclei. The apoptotic cells were collected by centrifugation, washed with PBS, and fixed in 4% paraformaldehyde for 20 min at room temperature. Thereafter, the cells were washed and resuspended in 20 µl of PBS before deposition on polylysine-coated coverslips and were left to adhere on cover slips for 30 min at room temperature, after which the cover slips were washed twice with PBS. The adhered cells were then incubated with 0.1% Triton X-100 for 5 min at room temperature and rinsed three times with PBS. The coverslips were treated with Hoechst 33258 for 30 min at 37 °C, rinsed with PBS, mounted on slides with glycerol-PBS, and processed as described previously (29).
Transient Transfection and Immunoprecipitation293 T cells were transfected with CMV-p53 and CMV-p300 using LipofectAMINE 2000 reagent (Invitrogen) according to the manufacturer's instructions. The medium was replaced, and the cells were incubated for an additional 24 h with curcumin (100 µM) or vehicle (Me2SO). The cells were harvested using radioimmunoprecipitation assay buffer (150 mM NaCl, 50 mM Tris, pH 7.4, 1% Nonidet P-40, 0.1% sodium deoxycholate, 1 mM EDTA, 0.5 µg/ml leupeptin, 0.5 µg/ml aprotinin, and 0.5 µg/ml pepstatin), and the p53 protein was immunoprecipitated from the lysates using mouse monoclonal anti-p53 antibody, DO1 (oncogene). The immunocomplexes were bound on protein G-Sepharose beads (Amersham Biosciences) for 12 h at 4 °C, washed three times with radioimmunoprecipitation assay buffer, and subjected to SDS-PAGE on a 10% gel followed by Western blotting using mouse monoclonal anti-p53 antibody, pAb421, or mouse monoclonal anti-acetylated lysine antibody.
Syncytium Inhibition AssayThe cell lines SupT1 and H9/HTLV-IIIb NIH 1983 were obtained from the NIH AIDS Research and Reference Reagent Program. H9/HTLV-IIIb NIH 1983 cells carrying a stably integrated provirus were cocultured with excess numbers of SupT1 cells at a ratio of 1:200 or 1:400. A total of 1 x 106 cells were seeded in each well of a 24-well plate and cultured in RPMI medium supplemented with 10% fetal calf serum and antibiotics. Curcumin in Me2SO was added to the cells to the final concentration as shown, and the cultures were incubated at 37 °C. All the wells received the same amount of Me2SO, including the control wells. Formation of syncytia was visible under light microscope within 12 h. The total number of syncytia in 10 representative wells was counted at different time points (12, 24, and 48 h); data for the 12-h time point are presented. Identical results were obtained at other time points. All the assays were performed in triplicate wells, and the experiment was performed two times.
| RESULTS AND DISCUSSION |
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25 µM, whereas the PCAF HAT activity showed no change even in the presence of 100 µM curcumin (Fig. 1, A and D). These data establish curcumin as the first known p300/CBP-specific natural HAT inhibitor.
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Curcumin permeates the cell, and it is known to have a role in cancer chemoprevention and also in tumor growth suppression (35). Exposure of tumor cells to curcumin in vitro results in the inhibition of cell proliferation and also induction of apoptosis (36). Consistent with the previous reports on other cell lines, treatment of HeLa cells with curcumin induces apoptosis (Fig. 5A, after a 24-h exposure to 75100 µM of the compound). Because curcumin inhibits p300/CBP HAT activity in vitro, we were interested to find out the effect of curcumin on the acetylation of histones in vivo. Histones were isolated from curcumin-treated cells and subjected to AUT polyacrylamide gel electrophoresis. Although it is difficult to detect a change in overall acetylation status from the histone fractions, treatment with curcumin modestly increased the unacetylated form of histone H4 and H2B (Fig. 5B, compare lane 2 with lanes 3 and 4). To visualize the effect of curcumin on in vivo histone acetylation more distinctly, histones were hyperacetylated by the treatment with deacetylase inhibitors, TSA and sodium butyrate (Fig. 5B, compare lane 1 and lane 5). When these cells were treated with 100 µM curcumin, acetylation of histones was found to be inhibited as marked by the appearance of more unacetylated H4 and H2B (Fig. 5B, lane 5 versus 6). In vitro acetylation experiments suggested that p300/CBP mediated acetylation of H3 and H4 was strongly inhibited by curcumin, although the overall analysis of total histones by AUT polyacrylamide gel electrophoresis showed no significant change in the histone H3 acetylation. Therefore, we employed Western blotting analysis to check the extent of histone acetylation upon curcumin treatment. As depicted in Fig. 5C, acetylation of both H3 and H4 were significantly (6-fold for H3 and 10-fold for H4; Fig. 5C, lane 5 versus 6) inhibited in the presence of curcumin in vivo. These results convincingly establish curcumin as a potent inhibitor of p300/CBP HAT activity in vitro and in vivo. Because p300/CBP also possesses factor acetyltransferase activity and acetylates several nonhistone proteins with functional consequences, we were interested to find out the effect of curcumin on p53 acetylation by p300 in vivo. Cells (293 T) were transfected with p53 and p300 mammalian expression vectors, and p53 was immunoprecipitated by anti-p53 monoclonal antibody. Analysis of the immunoprecipitated protein by Western blotting shows that incubation of the cells with curcumin completely inhibits the p300-mediated acetylation of p53 (Fig. 5D, compare lane 2 and lane 5). It is interesting that p53 could be acetylated by the endogenous factor acetyltransferases even without the transfection of p300 (Fig. 5D, lane 1). However, the endogenous p53 does not seem to be acetylated by the overexpressed p300 (Fig. 5D, lane 3 versus lane 1). This could be because the proteins do not localize together. Significantly, the acetylation status of the endogenous p53 is not altered in the presence of curcumin (Fig. 5D, lane 3 versus lane 6), suggesting that other factor acetyltransferases (GCN5/PCAF/TIP60) (37, 38) could acetylate p53 and that this acetylation was not inhibited by curcumin (also see Fig. 5D, compare lane 1 and lane 4). This result points out to the fact that the in vivo target of curcumin is p300/CBP and not the other factor acetyltransferases.
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Curcumin exhibits a variety of pharmacological effects including anti-tumor, anti-inflammatory, and anti-infectious activities. It was found to be a potent inhibitor of the HIV-1 integrase (41). Furthermore, curcumin could also inhibit the HIV-1 Tat-mediated transactivation (42) and the UV induced activation of the HIV-LTR gene expression, presumably through the inhibition of nuclear factor-
B activation (43). Although these reports suggest that curcumin may act as a repressor of HIV multiplication, its effect on viral replication was not demonstrated. During the course of infection, the HIV genome is integrated into the human chromatin. A single nucleosome called nuc1 is precisely positioned immediately after the transcription start site in cell lines where the HIV promoter is silent. The nuc1 is disrupted during transcriptional activation by acetylation (18). It was elegantly demonstrated that histone deacetylase inhibitors, such as trichostatin A, trapoxin, valproic acid and sodium butyrate activate the transcription from HIV promoter. HIV transcriptional activation after the treatment with HDAC inhibitors is associated with nuc1 remodeling (19). Moreover, it has been demonstrated that acetylation of HIV-1 transactivator Tat by p300 is important for its transcriptional activity (22). Thus, presumably curcumin would be an effective agent to stop the growth of this virus, through the inhibition of nuc-1 histones and Tat acetylation. We have tested this possibility by investigating the effect of curcumin on syncytia formation upon viral infection to SupT1 cells.
Various experimental formats have been used to evaluate infection of target cells by HIV or inhibition of the viral infection in the presence of an anti-viral compound (44, 45). The standard format is to add titered viral stock to the target cells at a known multiplicity of infection (m.o.i.) in the presence or absence of an antiviral compound and monitor the synthesis of the viral structural protein p24 or the enzyme reverse transcriptase (46, 47). In the natural context, the viral transfer is more efficient through cell-to-cell contact rather than free virus infecting a target cell. Prevention of the viral transfer between cells is technically more difficult than neutralizing the free virus. SupT1 cells are highly permeable for HIV-1, and these cells make numerous and large syncytia when infected with the virus. Taking advantage of this property, we co-cultured SupT1 cells in the presence of H9/HTLV-IIIb NIH 1983 cells that produce a T-cell tropic virus. A dose-dependent reduction in the number of syncytia was evident with increasing concentration of curcumin, and no syncytia were seen at the highest concentration of curcumin (Fig. 6A). To rule out the possibility of cytotoxicity and cell death, we determined the number of viable cells in all the wells using a trypan blue exclusion analysis. The cells were healthy even in the presence of 100 µM curcumin at the end of 48 h, suggesting that the drug was not cytotoxic for these cells at the concentrations used (data not shown). These results thus show that the p300-specific HAT inhibitor curcumin inhibits the multiplication of HIV, presumably through the inhibition of acetylation of Nuc1 as well as Tat (18, 22). It is interesting that we have found that curcumin strongly inhibits the acetylation of Tat by p300 in vitro (Fig. 6, B and C).
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B activation (43), and p300-specific HAT/factor acetyltransferase activity. Repression of the HIV replication by curcumin could be caused by any of the above or a combination thereof. It has been established that histone acetylation (of HIV nuc-1) and the factor (Tat) acetylation is essential for the HIV gene expression as well as multiplication (18, 22, 23). Combinatorial therapeutics has been the only recourse to preventing the spread of HIV and that, too, has had only moderate success. The identification of novel targets, which are involved in the regulation of HIV disease progression, would help in the design of a multipronged therapeutic response aimed at the complete eradication of the virus from the body. In this regard, we have introduced yet another target for the HIV therapeutics, the histone acetyltransferase p300/CBP. By regulating the acetylation of Tat and nuc1, this HAT mediates the activation of HIV from its latency. We have also introduced curcumin, a p300/CBP-specific, cell-permeable, non-toxic (48) HAT inhibitor that has been shown to inhibit the spread of HIV to the neighboring cells, as highlighted by the syncytia formation assay. These results, in conjunction with earlier studies on HAT inhibition, open up a new target with a wide array of potential therapeutic agents in HIV combinatorial therapy. Furthermore, dysfunction of histone acetyltransferases has been found to be associated with several diseases, such as cardiac hypertrophy, asthma, and cancer. In all of these diseases, it has been found that the cellular histone and nonhistone proteins are hyperacetylated (35, 49). Thus, the present finding that curcumin, a non-toxic dietary component, is a p300-specific inhibitor may find therapeutic applicability for a wide spectrum of diseases, apart from being used as a probe to dissect the molecular pathways in which p300 HAT activity is involved. | FOOTNOTES |
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These authors contributed equally to this work. ![]()
¶ Present address: Department of Pharmacology & Molecular Sciences, Johns Hopkins School of Medicine, 725 N. Wolfe St., Baltimore, MD 21205. ![]()
|| Senior research fellows of Council of Scientific & Industrial Research, India. ![]()

Supported financially by the Department of Biotechnology, Government of India (Grant BT/MED/HIV/05/99). ![]()

To whom correspondence should be addressed. Tel.: 91-80-22082840; Fax: 91-80-22082766; E-mail: tapas{at}jncasr.ac.in.
1 The abbreviations used are: HAT, histone acetyltransferase; CBP, CREB-binding protein; CREB, cAMP-response element-binding protein; PCAF, p300/CBP-associated factor; HDAC, histone deacetylase; CTPB, N-(4-chloro-3-trifluoromethyl-phenyl)-2-ethoxy-6-pentadecyl-benzamide; HIV, human immunodeficiency virus. ![]()
| ACKNOWLEDGMENTS |
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| REFERENCES |
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