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J. Biol. Chem., Vol. 279, Issue 6, 4686-4695, February 6, 2004
IcmR-regulated Membrane Insertion and Efflux by the Legionella pneumophila IcmQ Protein*
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| ABSTRACT |
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| INTRODUCTION |
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The ability of L. pneumophila to grow intracellularly can be recapitulated within cultured macrophages or cell lines (1). Phagosomes harboring L. pneumophila avoid fusion with the endocytic network as early as 5-min postinfection (5, 17), as endosomal markers such as Rab5 or the transferrin receptor are excluded from the phagosome (6, 7). Instead, the compartment appears to mature via a unique pathway that involves recruitment of components found in the early secretory pathway (8, 9). For example, the secretory pathway marker Arf1 has been recently localized on the L. pneumophila phagosome shortly after infection (10), and markers of early secretory vesicles are found surrounding the phagosome within 15 min after bacterial contact with macrophages (9). Within a few hours, rough endoplasmic reticulum accumulates and potentially docks with the phagosome (11, 12). Inside this intracellular niche, the bacteria replicate, yielding dozens of bacteria before lysing out of the macrophage to initiate a new replication cycle.
Several independent genetic screens have led to the identification of bacterial factors necessary for intracellular proliferation of L. pneumophila (13-16). Single mutations in the majority of the 25 dot/icm genes lead to complete inhibition of intracellular growth. Most dot/icm mutants fail to form a replicative phagosome and cannot avoid the endocytic pathway (17, 18). The majority of these genes show similarity to components of conjugative DNA transfer systems found on IncI plasmids R64 and Col1b-P9 (15, 16, 19). Consistent with this observation, L. pneumophila can mobilize the RSF1010 plasmid between bacterial strains in a dot/icm-dependent manner (16, 20). By analogy to other pathogens, it was hypothesized that the products of the dot/icm genes are the building blocks of a type IV secretion system that allows translocation of bacterial factors into the host cell. In agreement with this idea, RalF, which activates the cellular small GTPase protein Arf1, is a translocation substrate of the Dot/Icm system (10), as is LidA, a coiled-coil protein that associates with the phagosomal membrane (21).
Wild-type L. pneumophila but not dot/icm mutants induce osmotic cell death of the macrophages at a high multiplicity of infection (22). It has been hypothesized that the Dot/Icm proteins allow the secretion of a pore-forming protein that inserts into the host cell membrane as part of the secretion channel, and the resulting pore is responsible for this cytotoxicity. In contrast with this hypothesis, however, a partial loss of function mutation in icmT depresses high multiplicity of infection cytotoxicity but does not affect intracellular proliferation in U937 cells. This indicates that the pore formation promoted by L. pneumophila may not be involved in translocation of effector molecules into host cells (23, 24).
Several of the Dot/Icm proteins have been studied in detail, although no biochemical activities have been demonstrated for any components of this apparatus, except for the ability of IcmR to inhibit self-association of IcmQ (25, 26). Analysis of icmR and icmQ deletion strains indicates that these genes encode proteins necessary for intracellular growth, proper intracellular trafficking as well as high multiplicity of infection cytotoxicity (25, 26). Although these phenotypes suggest participation in the secretion channel itself, either within the bacterial envelope or on the mammalian plasma membrane, subcellular fractionation studies indicate that both IcmR and IcmQ are found in soluble fractions (25). The bulk of these two proteins is found in a complex likely to consist of one molecule of IcmQ and two or three molecules of IcmR (26). In the absence of IcmR, however, IcmQ forms large soluble homopolymers having a wide range of molecular weights, a property reminiscent of the behavior of type III secretion substrates in the absence of their chaperone (27, 28). A chaperone/substrate interaction has also been observed in the virB secretion system of the plant pathogen Agrobacterium tumefaciens, suggesting that conjugative systems similar to Dot/Icm may use such chaperones (29, 30).
We report here that although the primary sequence of IcmQ indicates that it is a highly hydrophilic protein, purified soluble IcmQ efficiently inserts into lipid membranes allowing efflux of a fluor of defined molecular weight. This behavior is reminiscent of pore-forming toxins such as Staphylococcus aureus
-toxin (31).
| MATERIALS AND METHODS |
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icmR mutation. Strains were passaged on CYET plates and AYE broth as described previously (13). For L. pneumophila, chloramphenicol was used at 5 µg/ml. For all experiments, L. pneumophila strains were grown to post-exponential phase (OD600 of 3.3-3.5) using bacterial motility as a post-exponential phase marker. The broad host range plasmid pMMB207 (33) was used to overexpress IcmQ under the control of the Ptac promoter in L. pneumophila strains. An EcoRI and SalI digestion fragment of the plasmid pGD32 (26) encoding the icmQ coding sequence was inserted into the EcoRI- and SalI-digested pMMB207, generating pGD41. Mouse bone marrow-derived macrophages were isolated from femurs of female A/J mice (Jackson Laboratories) and cultivated in L cell-conditioned media as described previously (34).
Production of the IcmR-IcmQ ComplexPlasmid pGD31 was used to express the GST-IcmR fusion protein in Escherichia coli (26). Plasmid pGD41 (described above) was used to express IcmQ in the absence of any tag. To allow in vivo formation of the complex, pGD31 and pGD41 were cotransformed into E. coli XL-1 blue (35), generating GD105. One-liter cultures of GD105 were grown to OD600 of 1.0 at 37 °C and induced with 0.1 mM IPTG1 for 3 h. Bacteria were pelleted by centrifugation, resuspended in 40 ml of 20 mM Tris-HCl (pH 7.5) containing 100 mM NaCl (TN), and sonicated on ice for 2 min on 50% duty cycle with a Branson Sonifier 250. Samples were then cleared by centrifugation at 12,000 x g for 15 min. 1 ml of glutathione-agarose (Amersham Biosciences) slurry was incubated with the cleared bacterial lysates for a period of 1-2 h. After extensive washing of the beads with TN buffer, the IcmR-IcmQ complex was cleaved from GST by adding 80 units of thrombin to the slurry and incubating the samples overnight at 4 °C. The suspension was then centrifuged briefly to pellet the beads, and the supernatant was collected. Thrombin was then removed by mixing the cleavage product with
30 µl of benzamidine agarose slurry (Sigma) and incubating for 15 min. The agarose was then pelleted, and the supernatant was collected. Protein concentration was determined using the Bradford assay (BioRad), and the sample was analyzed by SDS-PAGE followed by Coomassie Blue staining.
Purification of His-tagged ProteinsThe open reading frame of IcmQ was inserted into the pQE70 plasmid (Qiagen) to allow expression of IcmQ fused to a C-terminal histidine tag, generating pGD37. Oligonucleotides 5'-CATGAAAGATCAACTCTCGGATGAAC-3' and 5'-CGGGATCCTGCATTTTTAATTAGACGGCCATTG-3' (the BamHI site is underlined) were used to amplify a DNA fragment encoding the IcmQ open reading from LP02 genomic DNA. This fragment was digested by BamHI and cloned into pQE70 previously digested by SphI and BamHI (the SphI site overhang was blunted with mung bean nuclease). The C-terminal portion of IcmQ was cloned into the pQE70 plasmid to allow expression of amino acids 68-191 of IcmQ fused to a C-terminal histidine tag, generating pGD46. The DNA fragment corresponding to amino acids 68-191 of IcmQ was generated by PCR using oligonucleotides 5'-CATGATTGCCTTAAGGAGTGGTCAG-3' and 5'-CGGGATCCTGCATTTTTAATTAGACGGCCATTG-3' (the BamHI site is underlined) from LP02 genomic DNA. This fragment was digested by BamHI and cloned into pQE70 previously digested by SphI and BamHI (the SphI site overhang was blunted with mung bean nuclease). The plasmid pGD46 was electroporated in the XL-1 Blue containing pREP4 (Qiagen), generating GD 120.
To construct IQN, the 5'-end of icmQ was inserted into pQE70 to allow expression of amino acids 1-72 of IcmQ fused to a C-terminal histidine tag. The DNA fragment corresponding to codons 1-72 of icmQ was generated by PCR using oligonucleotides 5'-CCCGAAAAGTGCCACCTG-3' and 5'CGGGATCCATTTGCAAGATGAGACTCTGC-3' (the BamHI site is underlined) from pGD46. This fragment was digested by BamHI and inserted into pQE70 previously digested by SphI and BamHI (the SphI site overhang was blunted with mung bean nuclease) generating pTIM1. The plasmid pTIM1 was electroporated in the XL-1 Blue containing pREP4 (Qiagen).
One-liter cultures of the full-length or C-terminal portion of IcmQ were grown to an OD600 of 1.0 and induced with 0.1 mM IPTG for 3 h. Bacteria were pelleted, resuspended in 40 ml of 20 mM Tris-HCl, pH 7.5, 100 mM NaCl, and 20 mM imidazole. The suspension was sonicated on ice for 2 min on 50% duty cycle with a Branson Sonifier 250, pelleted at 12,000 x g for 15 min, and lysates were loaded onto a 5-ml metal chelation Hi trap column (Amersham Biosciences) using a Amersham Biosciences FPLC system. After extensive washing of the column with TN buffer, His-tagged proteins were eluted using 50 ml of a 0-200 mM imidazole gradient. Fractions containing full-length IcmQ or IQC were pooled and dialyzed overnight against TN buffer.
IcmQ Membrane Insertion AssayAll lipids used in this study were purchased from Avanti Polar Lipids Inc. E. coli PL from this supplier represents a crude extract from bacteria with the following composition: 67% PE, 23% PG, and 10% CA. Lipids stored in chloroform at 80 °C were dried down under a nitrogen stream in a 15-ml Corex tube and then dessicated overnight. Unless otherwise stated, 5 mg of lipids were used. Large unilamellar vesicles were prepared by two different techniques, either by detergent dilution (36) or by extrusion (37). For the detergent-based approach, lipids were resuspended in 0.5 ml of 20 mM Tris-HCl (pH 7.5), 100 mM NaCl, and 5% n-octylglucoside in the presence or absence of protein. The mixtures were then dialyzed against TN buffer for 24 h. For the extrusion-based approach, the lipid cake was hydrated at room temperature for 30 min in 0.5 ml of 20 mM Tris-HCl, pH 7.5, 100 mM NaCl, and 1 mM EDTA (TNE). Four cycles of freeze and thaw were performed between an ethanol/dry ice mix and a water bath either at room temperature or at 60 °C depending on whether the transition temperature of the lipids was above or below 50 °C. The suspension was then extruded by several passes through a 0.1 µM pore polycarbonate membrane using a mini extruder (Avanti Polar Lipids). Certain lipid mixtures such as the PC 18:0 first required passage through a 1 µM polycarbonate membrane to prevent clogging of the filter.
To assess association of proteins with preformed lipid vesicles, 20 µg of protein was mixed with 5 mg of lipid vesicles in TNE buffer and incubated at room temperature for 30 min prior to sucrose gradient centrifugation. Sucrose in TNE buffer was added to the samples to a final concentration of 45% (w/v) and 1 ml of the mixture was placed at the tube bottom (bottom fraction). A 7-ml 30% (w/v) sucrose solution in TNE buffer was layered on the samples (middle fraction) and finally 1 ml of TNE was layered on top (top fraction). The samples were then subjected to ultracentrifugation at 100,000 x g in a Beckman SW41 rotor for 15 h. The contents of the different fractions were analyzed by SDS-PAGE follow by Coomassie staining of the gel or by Western blot analysis. To generate lipid-associated IcmQ, the top fraction including the interface with the 30% (w/v) sucrose layer was dialyzed against TNE, prior to treatment with various reagents as described in Fig. 2.
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3.5). The bacteria were pelleted, the supernatant was precipitated with trichloroacetic acid and spheroplasts were made from the pelleted bacteria (38). Subcellular fractionation was then performed following the procedure described by Coers et al. (25) except that Tris-HCl was used as a buffer instead of Hepes. Briefly, sonicated spheroplasts were pelleted, resuspended in 20 mM Tris-HCl, pH 7.5, and loaded on a 3-step sucrose gradient. Membranes were collected at the 25-60% sucrose interphase, washed with a high salt solution containing 20 mM Tris-HCl, pH 7.5, and 0.5 M NaCl solution and then solubilized with 2% Triton X-100. Equivalent volumes of the different fractions were loaded on SDS-PAGE and analyzed by Western blot using antibodies directed against L. pneumophila proteins. Calcein Release AssayLipid vesicles were generated by extrusion as described above except that lipids were resuspended at 10 mg/ml in TNE containing 80 mM calcein (pH 7.5) (39). Free calcein was then removed using a 10-ml G-75 column (Amersham Biosciences) equilibrated with TNE. The lipid vesicles were diluted in TNE to a final concentration of 60 µg/ml in cuvettes having four clear sides, and subjected to constant agitation. Fluorescence emission was monitored at 520 nm after excitation at 490 nm using an SLM Aminco spectrofluorometer. As an alternative to calcein, Dextran 3000 tetramethyl rhodamine (Molecular Probes) was resuspended at 20 mg/ml in TNE, added to the dried lipids and extruded lipid vesicles were prepared as above. Fluorescence was monitored at 580 nM after excitation at 530 nM.
Sonication Release AssayPC vesicles containing IcmQ derivatives were prepared using the OG dialysis technique described above. As a control, vesicles were prepared in the absence of protein but in the presence of 80 mM calcein. Following purification, the lipid vesicles were sonicated using a Bransen Sonifier 250. To determine the efficiency of vesicle disruption, the vesicles were diluted in TNE and fluorescence emission was monitored as above. Sonication conditions were found such that there was 50% of the maximum fluorescence of the calceinladen vesicles (30 pulses, output level 3, 50% duty cycle), indicating at least 50% of the vesicle contents had been released, relative to treatment with 0.1% Triton X-100. These conditions were then applied to lipid vesicles incubated with protein.
SDS-PAGE and Western Blot AnalysisTris-Tricine gels (15% acrylamide) were performed as described (40) except that the sample buffer contained phenol red dye. For Tris glycine gels, samples were boiled for 5 min in Laemmli buffer, resolved on 15% SDS-PAGE and transferred onto Immobilon-P membranes (Millipore). Immunoblotting was then performed as described (26). Membranes were processed with the Renaissance detection kit (PerkinElmer Life Science Products), and blots were either exposed to film (Kodak) or the image was directly acquired on a Kodak Image Station to allow quantitation of the signal.
ImmunofluorescenceFor IcmQ localization studies, GD132 (LP02/pGD32, Ptac-icmQ) was grown to an OD600 of 2.5 in AYET broth before adding IPTG at 0.1 mM for about 2 h until the culture reached post-exponential phase. Bacteria were then either fixed in periodate-lysine-paraformaldehyde (PLP) (41) containing 5% sucrose for 30 min or used to infect macrophages. Bacteria were deposited on bone marrow-derived macrophages at an multiplicity of infection of 20 by centrifugation at 150 x g for 5 min at room temperature and then incubated at 37 °C for various times. Cells were fixed for 30 min at 37 °C in PLP containing 5% sucrose. After removal of the fixative by washing with phosphate-buffered saline, infected cells were permeabilized with 20 °C methanol for 10 s. To analyze broth grown bacteria in the absence of mammalian cells, bacteria were pelleted onto coverslips previously treated with 0.1% poly-L-lysine. Coverslips with fixed infected macrophages or broth grown bacteria were then treated in parallel. Coverslips were blocked and stained with anti-L. pneumophila antibody as described (42). Samples were then stained with biotinylated affinity-purified anti-IcmQ polyclonal antibody (1:200) (26). Biotinylation was performed according to the manufacturer (Pierce). After extensive washing, coverslips were then stained with streptavidin-Alexa-488 (1:2000, Molecular Probes).
| RESULTS |
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Phospholipid Association Is Due to InsertionThe copurification of IcmQ with PC vesicles could be the result of peripheral association or integration into the bilayer. To determine the nature of the association of IcmQ with lipids, membrane-associated IcmQ was exposed to buffers containing 1 M NaCl, or 1% Triton X-100 and subjected to sucrose gradient fractionation(Fig. 2A). Western blot analysis allowed visualization of a major band migrating at 22 kDa corresponding to IcmQ and a minor band migrating at 50 kDa that could correspond to an SDS-resistant dimer of IcmQ, High salt did not affect the association of IcmQ with lipid vesicles indicating that IcmQ is not peripherally associated with the lipid bilayer. In contrast, IcmQ could be released by addition of Triton X-100, showing that flotation was dependent on the integrity of lipid vesicles. To further demonstrate that IcmQ was not trapped within the lumen of vesicles, sucrose gradient purified IcmQ that had been incorporated into PL vesicles by the detergent dialysis strategy was subjected to sonication to disrupt the vesicles. No detectable IcmQ was released after sonication, using conditions in which 50% of the vesicle contents were released ("Materials and Methods"), indicating that there was little or no protein trapped in the lumen of the vesicles (Fig. 2B). Taken together, these results indicate that lipid vesicle-associated IcmQ was inserted into the lipid bilayer.
Insertion of IcmQ in the lipid bilayer should be accompanied by alteration in the protease sensitivity of IcmQ. Purified PL-associated IcmQ or IcmQ in the absence of lipids was exposed to trypsin for 30 min at 37 °C and analyzed by Western blot (Fig. 2C, IcmQ). In the absence of lipids, IcmQ was resistant to trypsin concentrations up to 0.1 µg/ml. At higher concentrations (1-100 µg/ml) IcmQ was processed into a trypsin-resistant 11-kDa fragment that, when analyzed by Edman degradation and mass spectrometry, corresponded to the C terminus of IcmQ (amino acids 72-191). In contrast, when IcmQ integrated into liver PL vesicles was exposed to trypsin, significant amounts of full-length IcmQ remained unaffected by trypsin at concentrations up to 100 µg/ml. Similar results were obtained with proteinase K (data not shown). PL insertion therefore allowed increased protection of the N-terminal portion of the protein.
IcmR Prevents Insertion of IcmQ into Lipid Membranes IcmQ has been reported to fractionate primarily as a soluble protein in wild-type L. pneumophila grown in AYE broth (25). As IcmQ is found associated with IcmR in a soluble fraction we hypothesized that IcmR prevents IcmQ from inserting into membranes. To test this idea, the subcellular localization of IcmQ was determined in a
icmR strain of L. pneumophila.
Spheroplasts from bacteria grown in AYE broth were lysed by sonication and membrane-associated proteins were separated from soluble proteins by centrifugation onto a sucrose cushion ("Materials and Methods"). The membranes were then washed with high salt and extracted with Triton X-100. In wild-type bacteria, IcmQ was localized in the soluble fraction (Fig. 3A, LP02, fraction C). In contrast, in a
icmR strain, about an equal amount of IcmQ was found in the soluble and the high salt resistant, Triton X-100 extractable fractions, indicating a significant fraction of IcmQ is associated with the membrane (Fig. 3A,
icmR, compare fractions C and E). This subcellular localization was specific for the
icmR strain, as it was not observed in a dotA strain (Fig. 3A, LP03). As controls, the fractionation properties of isocitrate dehydrogenase (ICDH) and DotF proteins were analyzed. ICDH was found in the soluble fraction in all strains tested (Fig. 3A, ICDH), whereas DotF was in the Triton X-100 inextractable membrane fraction in all strains (Fig. 3A, DotF).
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Overexpression of IcmQ Allows Immunofluorescence Detection of the Protein on the Surface of L. pneumophila After Contact with MacrophagesThe interference of IcmQ association with membranes by the presence of IcmR suggests that at some time during bacterial interaction with host cells IcmQ is released from IcmR to interact with a target membrane that remains to be identified. In a previous study we were not able to detect IcmQ by immunofluorescence on L. pneumophila-infected bone marrow-derived macrophages (26). To enhance the signal, IcmQ was overexpressed in L. pneumophila with an IPTG-inducible promoter and this strain was put into contact with macrophages by a short centrifugation. After 10 min of incubation at 37 °C, samples were immunolabeled using antibodies raised against IcmQ (Fig. 4A; phase contrast, Fig. 4, C and D) and against L. pneumophila (Fig. 4B; phase contrast, Fig. 4, C and D).
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Membrane-inserted IcmQ Allows Efflux of Molecules of Discrete SizeThe capacity of IcmQ to exist in a soluble form associated with a chaperone and to insert into lipid bilayers in the absence of its chaperone is reminiscent of proteins such as IpaB or VirE2 that have pore-forming activity (30, 44). Therefore, we used the fluorescent dye calcein to examine whether IcmQ was able to form pores in a target membrane (39). A concentrated, self-quenched solution of this dye (80 mM) was encapsulated into liposomes prepared in the absence of detergent, and subsequently separated from the free dye by size exclusion chromatography ("Materials and Methods"). If IcmQ is able to form pores as it inserts into these vesicles, the dye should be released, resulting in fluorescence due to dilution and relief of self-quenching. Complete lysis of the liposomes with 0.1% Triton X-100 was used to determine the maximum amount of fluorescence after dilution.
Addition of IcmQ to egg PC vesicles containing calcein led to an immediate increase in fluorescence in a protein concentration-dependent manner (Fig. 5A). Protein concentrations as low as 25 nM (0.5 µg/ml) induced significant calcein release (5% of that observed with Triton X-100). At 400 nM, IcmQ induced 20% of the encapsulated store of calcein to be released. To assess the specificity of the effect, several negative controls were introduced (Fig. 5B). Trypsin-treated full-length IcmQ was not able to induce the release of calcein (Fig. 5B). Copurified IcmR-IcmQ complex at a concentration of 100 µM also was unable to induce calcein efflux. Furthermore, 20-fold molar excess of IcmR added to IcmQ was able to completely inhibit calcein efflux. Therefore, full-length IcmQ could induce calcein release in an IcmR-inhibitable fashion (Fig. 5B).
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Lipid Association Is Not Sufficient for Pore FormationIn an attempt to explore whether IcmQ exhibits specificity for lipid head groups, the pore-forming properties of IcmQ were tested on lipid extracts from different sources and synthetic phospholipids. Vesicles made out of egg PC or liver lipids exhibited comparable IcmQ-induced calcein efflux, although liver lipids were somewhat less efficient (Fig. 5D, liver extract, 0.1 µM). In contrast, calcein efflux from E. coli lipid vesicles required ten times more protein (Fig. 5D, E. coli extract, compare 0.1 µM to 1 µM). Membrane association experiments were performed in parallel with the calcein efflux experiments described above, with vesicles prepared in parallel and under identical conditions. The rate of association of IcmQ was around 25% in egg PC whereas liver extracts, E. coli extract, or E. coli mix allowed over 60% association (Fig. 5D). Therefore, membrane association is not sufficient to cause pore formation and the lipid requirements for the two events appear to be separable.
Lowered efficiency of IcmQ-induced calcein efflux observed with the E. coli lipid extract was not due to PL head groups present in the extract. IcmQ was able to induce calcein efflux from synthetic phospholipids, regardless of the headgroup composition (data not shown). In addition, a mix of 67% PE, 23% PG, and 10% CA, which mimics E. coli PL content, allowed extremely high IcmQ-induced calcein release (Fig. 5D, E. coli mix), with 100 nM of IcmQ sufficient to induce 30% of the efflux observed with Triton X-100. The low efficiency of IcmQ-induced calcein release observed with the E. coli extract could be due to the presence of an unidentified component of the mixture or to the fatty acyl chain distribution of this sample.
Limited Protease Digestion Indicates That IcmR Binds to the N-terminal Portion of IcmQ (amino acids 1-57)The ability of IcmR to block association of IcmQ with lipid vesicles prompted us to speculate that interaction of IcmR with IcmQ masks a region of IcmQ involved in membrane insertion. To identify the region of IcmQ involved in binding IcmR and possibly in membrane insertion, the IcmR-IcmQ complex was exposed to trypsin and the region of IcmQ that was protected from trypsin digestion by IcmR was identified.
In the presence of trypsin at concentrations as low as 1 µg/ml, IcmR was entirely degraded (Fig. 6A), whereas IcmQ was processed into an 11 kDa trypsin-resistant C-terminal fragment (amino acids 72-191), as described above (Fig. 2C). When the IcmR-IcmQ complex was analyzed, however, there were protected species for both proteins. In the absence of trypsin, IcmQ that had been copurified with IcmR appeared as doublet bands around 22 kDa, the larger band corresponding to full-length IcmQ (amino acids 1-191, FL) and the slightly faster migrating band to amino acids 1-180, as determined by N-terminal sequencing and mass spectrometry (Fig. 6, C and D). At 1 µg/ml of trypsin, full-length proteins were chased into four stable protein fragments (Fig. 6C, 1 µg/ml trypsin). The two larger fragments corresponded to amino acids 72-191 and 72-180 of IcmQ (Fig. 6, C and D) as seen with IcmQ alone (Fig. 6B), whereas the two bands migrating at about 9 and 8 kDa were specific to the IcmR-IcmQ complex. The 9-kDa band corresponded to amino acids 23-95 of IcmR and the 8-kDa band to amino acids 1-57 of IcmQ (Fig. 6 C and D). The presence of IcmR in the reaction thus allowed protection of the first 57 amino acids of IcmQ. Conversely, IcmQ protected a central portion of IcmR (amino acids 23-95). It is worth noting that a fragment of IcmR corresponding to amino acids 1-95 is present at the lower trypsin concentrations (0.1-0.2 µg/ml), indicating that a larger portion of IcmR may be in contact with IcmQ than the region of the protein protected against high protease concentrations.
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To test whether the protected N-terminal portion of IcmQ was required for promoting membrane insertion, this region was deleted and the truncated protein was purified (amino acids 68-191; designated IQC; "Materials and Methods"). Unlike the results from IQN, when IQC was incubated with preformed PL vesicles, this protein was unable to insert (Fig. 7C, post-dialysis), indicating the N terminus was necessary for this activity. Consistent with this observation, IQC was unable to promote calcein efflux when incubated with preformed vesicles (Fig. 5B). Surprisingly, however, IQC could be reconstituted into lipid vesicles by incubating the protein with lipids in the presence of OG followed by removal of the detergent by dialysis (Fig. 7C, pre-dialysis). In the same conditions, little of the GST floated on top of the gradient (data not shown). Furthermore, when purified vesicles having incorporated IQC were disrupted by sonication ("Materials and Methods"), only a small portion of the vesicle-associated protein was released (Fig. 7D), indicating that the association of IQC with PL was not due to trapping of the protein within the lumen of the vesicles. The association of IQC with the PL vesicles did not appear to be due to interaction of a mutant derivative that is poorly folded, exposing hydrophobic residues not normally revealed by this domain. IQC is extremely hydrophilic, as the protein is soluble at 80 mg/ml in neutral buffers.2 Secondly, circular dichroism revealed that the largely
-helical structure of the protein was maintained in the IQC derivative (Supplementary Materials, Fig. S1).
Taken together these data indicate that the N-terminal portion of IcmQ (the region involved in IcmR binding) is necessary for the insertion of the protein into preformed PL vesicles, can insert at high protein concentrations, and is able to form pores. The C-terminal portion of IcmQ, on the other hand, cannot insert into preformed PL vesicles, but appears to stabilize protein insertion in lipid membranes. As IQC can be reconstituted into PL vesicles by the detergent dialysis strategy, this portion of the protein could have a close interaction with the bilayer in the context of the full-length protein.
| DISCUSSION |
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A summary of the properties of each IcmQ derivative analyzed in this work (Table I) supports the proposition that the N-terminal of the protein is involved in insertion, with the C-terminal stabilizing this event in some fashion. That the N-terminal is involved in PL interaction is consistent with several observations. First, interaction with a PL bilayer led to protection of the N-terminal portion of IcmQ from protease digestion, suggesting that this portion of the protein is buried in the bilayer. Second, a His-tagged recombinant protein encoding the first 72 amino acids of IcmQ was able to insert into lipid vesicles and cause calcein efflux, indicating that this portion of the protein is necessary and sufficient for these processes. Third, deletion of the N-terminal portion of the protein led to a loss of the ability to insert into preformed bilayers. The first 72 amino acids of IcmQ are thus able to exist in solution at reasonably high concentration, insert into a lipid bilayer and cause calcein efflux presumably through an oligomerization step.
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Interestingly, our results indicate that membrane insertion and pore formation are separable, at least to some degree. For instance, with some types of lipids, such as the E. coli lipid extract, IcmQ is unable to induce calcein efflux but still associates efficiently with the PL. This result could reflect the fact that once inserted into the membrane a second step occurs, perhaps protein oligomerization or a conformational change. Such a two step process, was demonstrated for perfringolysin O (49). In this case, a membrane recognition step precedes formation of the pore. One region of perfringolysin integrates into the membrane and is responsible for membrane recognition, but does not penetrate deeply into the bilayer and is not part of the actual pore. After membrane recognition, the formation of a pore occurs via insertion of a second domain into the bilayer. Insertion without pore formation in E. coli lipid extracts could also explain why IcmQ overexpression in the absence of IcmR was not toxic to the bacteria.
Consistent with its role as a regulator of IcmQ activity, IcmR prevented the insertion of IcmQ into membranes both in growing cells and in artificial PL bilayers. Furthermore, our results provide a molecular mechanism for this phenomenon. The binding of IcmR to IcmQ led to the protection of trypsin-sensitive sites in the N-terminal portion of IcmQ, indicating that IcmR binds to the same region required for membrane insertion into preformed vesicles (residues 1-57). IcmR thus prevents IcmQ insertion into lipid membranes by masking the region of IcmQ involved in this process.
As an initial step toward examining the in vivo function of IcmQ, we studied its localization during infection of bone marrow-derived macrophages. IcmQ could be detected by immunofluorescence proximal to L. pneumophila shortly after infection of macrophages, suggesting that at least part of IcmQ was localized on the bacterial surface after contact with host cells. IcmQ could not be detected on the bacterial cell surface during growth in broth, indicating that a rapid change occurs after contact with the macrophages, leading to exposure of the protein. It should be emphasized that this was observed upon overexpression of IcmQ, and that localization of IcmQ when expressed in physiological amounts remains to be determined. In addition, the mechanism of IcmQ export to the outer membrane is unclear, as it was independent of other Dot/Icm proteins. Nevertheless these results favor a role for IcmQ either in constructing the outer portion of the translocation channel or in being part of this portion of the channel. Some known properties of IcmQ affect our understanding of this particular model. First,
icmQ strains are salt resistant,3 a property thought to be associated with a defective dot/icm translocation apparatus (50). Furthermore, mutations in the icmQ gene allow survival of L. pneumophila strains lacking the DotL protein.4 Mutants having lesions in dotL are not viable, but mutations in genes thought to encode components of the core type IV secretion machinery relieve the dotL lethal phenotype. Therefore, if IcmQ is part of the bacterial-associated portion of the translocation machinery, our localization data are consistent with its transit to the outer part of the complex at the time of bacterial contact with host cells. Since the pore activity of IcmQ and its cellular localization are subject to regulation, IcmR and IcmQ could be involved in the regulation of the opening and closing of the channel when in contact with host cells.
Finally, it should be pointed out that roles for IcmQ in the bacterial membrane as well as on the host cell side of the translocation channel are not mutually exclusive. In fact, the properties of mutations in icmQ and the behavior of the IcmQ protein are reminiscent of translocated substrates. Type III secretion system translocated proteins such as SipB, IpaB and IpaD have been observed previously on the bacterial cell surface, and IpaD has been shown to regulate the export of other effectors (51-54). The observed localization of IcmQ at the bacterial surface could represent an intermediate step prior to translocation into the host cell. As both PL membrane-insertion and pore formation are blocked by the presence of IcmR, the presence of IcmQ in the membrane would presumably result from the generation of a signal that instructs IcmR to be released from IcmQ. Bacterial binding to host cells may transmit such a signal. IcmQ also has the unusual property of being soluble and being able to insert into membranes where it forms pores, similar to membrane-active toxins such as the S. aureus
-hemolysin (31) or Colicin E1 (55). A similar pore-forming activity is observed with the Shigella flexneri protein IpaB (44) and the A. tumefaciens VirE2 protein (30), which are translocated to host cells. Future research will focus on further defining the role of the pore-forming activity of IcmQ during infection and how it relates to the other Dot/Icm components.
| FOOTNOTES |
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The on-line version of this article (available at http://www.jbc.org) contains Supplementary Data. ![]()
An Irvington Institute for Immunological Research Fellow. Current address: INSERM U570, Faculté de Medecine Necker-Enfants Malades, 75015 Paris, France. ![]()
|| To whom correspondence should be addressed. Tel: 617-636-3993; Fax: 617-636-0337; E-mail: ralph.isberg{at}tufts.edu.
1 The abbreviations used are: IPTG, isopropyl-1-thio-
-D-galactopyranoside; PL, phospholipid; PC, phosphatidylcholine; PE, phosphatidylethanolamine; PG, phosphatidylglycerol; PI, phosphatidylinositol; CA, cardiolipin; Ch, cholesterol; ICDH, isocitrate dehydrogenase; Tricine, N-[2-hydroxy-1,1-bis(hydroxymethyl)ethyl]glycine; GST, glutathione S-transferase. ![]()
2 S. R. Chaudhury and C. Akey, personal communication. ![]()
3 C. Roy, personal communication. ![]()
4 J. Vogel, personal communication. ![]()
| ACKNOWLEDGMENTS |
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