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J. Biol. Chem., Vol. 280, Issue 13, 12461-12466, April 1, 2005
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From the
Center for Microbial Pathogenesis and
Department of Genetics and Developmental Biology, University of Connecticut Health Center, Farmington, Connecticut 06030 and the ¶Program in Cell Biology, Department of Medicine, National Jewish Medical Research Center, Denver, Colorado 80206
Received for publication, December 28, 2004
| ABSTRACT |
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pem2
lacking the phosphatidylethanolamine methyltransferase genes to grow in the absence of choline. Lipid analysis of the Pfpmt-complemented pem1
pem2
strain demonstrates the synthesis of phosphatidylcholine but not the intermediates of phosphatidylethanolamine transmethylation. Complementation of the pem1
pem2
mutant relies on specific methylation of phosphoethanolamine but not phosphatidylethanolamine. Interestingly, a mutation in the yeast choline-phosphate cytidylyltransferase gene abrogates the complementation by Pfpmt thus demonstrating that Pfpmt activity is directly coupled to the Kennedy pathway for the de novo synthesis of phosphatidylcholine. | INTRODUCTION |
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Biochemical studies have indicated that the synthesis of phosphatidylcholine (PtdCho),1 the major phospholipid in P. falciparum membranes can occur via two metabolic pathways, the de novo choline
phosphocholine
CDP-choline pathway, also named the Kennedy pathway, and a newly identified route that we named the serine decarboxylation-phosphoethanolamine methylation (SDPM) pathway (6, 8). The Kennedy pathway initiates with the transport of choline from host serum into the parasite cytoplasm by unidentified erythrocyte and P. falciparum choline transporters. Choline is then converted into PtdCho by the sequential action of choline kinase, choline-phosphate cytidylyltransferase, and CDP-diacyl-glycerol-cholinephosphotransferase (912). The SDPM pathway initiates from serine that is either transported from the host or obtained from active degradation of host proteins (13, 14). Serine is first decarboxylated to form ethanolamine by a serine decarboxylase and then phosphorylated to produce phosphoethanolamine (P-Etn) by an ethanolamine kinase (8). P-Etn is subsequently methylated to generate phosphocholine (P-Cho) by a phosphoethanolamine methyltransferase (Pfpmt) (6). The P-Cho enters the Kennedy pathway to form PtdCho. The SDPM pathway has thus far been characterized only in P. falciparum and plants (6, 1517), and available genomic data suggest that it might also take place in Caenorhabditis elegans, Caenorhabditis briggsae, and Anopheles gambiae (6).
Pfpmt is expressed throughout the intraerythrocytic cycle as well as during the gametocyte and sporozoite stages of the parasite (6, 18, 19). Pfpmt does not share homology with phosphatidylethanolamine (PtdEtn) methyltransferases from lower and higher eukaryotes, and no other homologs of this protein could be found in human or other mammalian data bases (6). Unlike the bipartite structure of plant phosphoethanolamine methyltransferases with two AdoMet-dependent catalytic domains, the malarial Pfpmt is only half the size of plant phosphoethanolamine methyltransferases and possesses a single catalytic domain solely responsible for the three-step AdoMet-dependent methylation of P-Etn into P-Cho (6). Although biochemical studies in vitro showed that Pfpmt and plant phosphoethanolamine methyltransferases were specific for P-Etn and did not catalyze the methylation of PtdEtn (6), one cannot exclude that these phosphoethanolamine methyltransferases (PMT) also catalyze the methylation of PtdEtn in vivo. The difficulty in genetically manipulating P. falciparum, and the fact that yeast cells lack the ability to convert P-Etn into P-Cho make yeast an attractive system to assess the specificity of Pfpmt in vivo. In yeast grown in the absence of choline, the synthesis of PtdCho occurs primarily via the transmethylation of PtdEtn by two methyltransferases encoded by the PEM1 (CHO2) and PEM2 (OPI3) genes (2022). Individual deletions of PEM1 or PEM2 cause no discernable phenotypes, whereas disruption of both genes is lethal unless choline is provided exogenously and transported via the choline transporter Hnm1 (20, 21). Here we have taken advantage of the extensive biochemical and genetic knowledge of phospholipid metabolism in yeast to examine the in vivo substrate specificity of Pfpmt. Our data provide biochemical and genetic evidence demonstrating that in vivo Pfpmt does not catalyze the transmethylation of PtdEtn to form PtdCho but instead catalyzes the methylation of P-Etn into P-Cho. Furthermore, we show that Pfpmt plays an important role in PtdCho biosynthesis by coupling its activity to the Kennedy pathway.
| MATERIALS AND METHODS |
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pem2
-PfPMTCO cells were grown overnight in SG medium supplemented with 2 mM ethanolamine and in the absence of choline. The cells were diluted to A600 = 0.005 in 75 ml of fresh SG medium and grown to A600
1.5. Cells were harvested and washed twice with water. Lipids were extracted by the Bligh and Dyer method (26) and separated on a two-dimensional thin layer chromatography (TLC). For the first dimension a solvent containing chloroform/methanol/ammonium hydroxide (84.5: 45.5:6:5) was used. The second solvent system was composed of chloroform/glacial acetic acid/methanol/water (90:30:6:2.6). Lipids were stained with iodine vapor. Each lipid spot was excised from the plate and quantified by measuring phosphorus (27). The results are shown as the percentage of total lipid phosphorus in each phospholipid fraction.
Purification of Pfpmt in Yeast and Protein ImmunoblottingS. cerevisiae wild-type and pem1
pem2
cells harboring pYES2.1 and pYES2.1 GAL1::PfPMTCO were grown in 50 ml of SD or SG media to A600 = 1 at 30 °C. Extract preparation and purification of the His6-V5-tagged Pfpmt by affinity chromatography were performed as described previously (25). Western blot analysis was performed using affinity-purified proteins from cells grown in minimal medium glucose or galactose. Proteins were separated by SDS-PAGE, transferred to a nitrocellulose membrane, and analyzed by immunoblot using anti-V5 primary (Invitrogen, 1:5000 dilution) and anti-mouse secondary (1:10 000 dilution) antibodies.
Enzyme AssaysYeast cells were grown in 50 ml of SD or SG media to A600 = 1 at 30 °C and lysed in 50 mM Tris-HCl buffer, pH 8.0, 10% glycerol, 1 mM dithiothreitol, and protease inhibitor mix by agitation with acid-washed glass beads. The 10,000 x g supernatant was dialyzed against 5 mM Hepes, pH 7.8, and 0.5 mM dithiothreitol. Pfpmt was then affinity-purified as recommended by the manufacturer. PMT activity was determined by measuring the incorporation of radioactivity from [methyl-14C]AdoMet into P-Etn as described previously (6). The incubation mixture in a final volume of 100 µl, contained 100 mM Hepes, pH 8.6, 2 mM EDTA, 10% glycerol, 100 µM P-Etn, 100 µM AdoMet (100 nCi of [methyl-14C]AdoMet), and 50 µg of crude extract or affinity-purified recombinant enzyme. The reaction was incubated for 30 min at 30 °C and terminated by the addition of 1 ml of ice-cold H2O. The product was purified through a AG (H+) resin, and the identity of the reaction product was confirmed by TLC using [14C]P-Cho (55 mCi/mmol; ARC) as a standard. Pfpmt activity was also measured using 100 µM ethanolamine and 100 µm PtdEtn as described previously (6). For determination of PtdEtn methyltransferase activity, a PtdEtn emulsion was prepared by sonication in the presence of 0.02% Triton X-100 as described previously (16, 28), and the reaction was performed in Tris buffer, pH 8.5, using 50 µg of crude extract.
| RESULTS |
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pem2
MutantYeast cells lack PMT activity. However, they express two genes PEM1 and PEM2, which encode two enzymes required for the three-step transmethylation of PtdEtn into PtdCho. Deletion of either PEM1 or PEM2 produces viable strains, whereas deletion of both genes is lethal unless external choline is provided (20, 21). To determine whether expression of Pfpmt can complement the loss of PtdEtn transmethylation, a yeast strain, pem1
pem2
, lacking PEM1 and PEM2 was constructed and transformed with the GAL1-PfPMTCO plasmid or the empty vector. The resulting transformants were confirmed to express Pfpmt by immunoblotting using anti-V5 monoclonal antibodies (Fig. 5A) and were further tested for their ability to grow in the absence of choline under inducing (in presence of galactose) and repressing (in presence of glucose) conditions (Fig. 5B). Because of residual choline in agar containing media, the assays were performed in both solid and liquid media. As expected pem1
pem2
cells expressing the empty vector required choline for growth under both glucose and galactose conditions. In contrast, pem1
pem2
cells expressing GAL1-PfPMTCO were able to grow in the absence of choline when galactose was the sole carbon source but required choline when grown in the presence of glucose (Fig. 5B). These data demonstrate that Pfpmt suppresses the choline auxotrophy of the pem1
pem2
mutant.
|
pem2
is via restoration of the synthesis of PtdCho, phospholipids were prepared from wild-type and pem1
pem2
-GAL1-PfPMTCO cells, grown in absence of choline, analyzed by TLC, and quantified. PtdCho could be detected in both strains (Fig. 6A), although the level of this phospholipid in the pem1
pem2
-GAL1-PfPMTCO strain constituted only 32% of what is synthesized by wild-type cells (Fig. 6B). In addition, the PtdEtn level in the pem1
pem2
-GAL1-PfPMTCO strain was almost double that of the wild-type cells (Fig. 6), suggesting continuous accumulation of this phospholipid as a result of synthesis via phosphatidylserine decarboxylation and the CDP-ethanolamine pathway. Interestingly, significant amounts of phosphatidyldimethylethanolamine (PtdEtn(Me)2) could be detected in wild-type cells but no intermediates of PtdEtn transmethylation could be detected in the pem1
pem2
-GAL1-PfPMTCO cells (Fig. 6). Together these results suggest that Pfpmt-mediated synthesis of PtdCho is not via methylation of PtdEtn but rather via the methylation of P-Etn. To further validate this interpretation we assessed the specificity of protein extracts prepared from wild-type, pem1
pem2
, and pem1
pem2
-GAL1-PfPMTCO cells for P-Etn versus PtdEtn substrates. Protein extracts from wild-type cells catalyzed the transmethylation of PtdEtn into PtdCho, but showed no specificity toward P-Etn substrate (Fig. 7A). On the other hand, protein extracts from pem1
pem2
-GAL1-PfPMTCO cells catalyzed the three-step methylation of P-Etn into P-Cho but showed no specificity for PtdEtn substrate (Fig. 7). As expected protein extracts from pem1
pem2
grown in the presence of choline lacked both P-Etn and PtdEtn methylation activities (Fig. 7).
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pem2
Mutant Requires a Functional Kennedy PathwayTo evaluate the importance of the CDP-choline pathway in Pfpmt suppression of pem1
pem2
choline auxotrophy, we assessed the function of Pfpmt in a pem1
pct1ts mutant lacking PtdEtn transmethylation activity and altered in the de novo synthesis of PtdCho via the Kennedy pathway (29). This mutant harbors, in addition to a genetic deletion of the PEM1 gene, a spontaneous thermo-sensitive mutation in the PCT1 gene encoding choline-phosphate cytidylyltransferase, the second step in the CDP-choline pathway, thus resulting in a growth defect at 37 °C. Expression of Pfpmt did not complement the thermosensitivity of the pem1
pct1ts (Fig. 8). As a control the pem1
pem2
strain harboring Pfpmt grew normally in the absence of choline at 30 (Fig. 5B) and 37 °C (not shown), whereas the pem1
pem2
strain harboring an empty vector required choline for growth at both temperatures (not shown). Together, these results suggest that Pfpmt function is directly coupled to the Kennedy pathway, further demonstrating the specificity of this enzyme for P-Etn in vivo.
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| DISCUSSION |
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Because no homologs of PtdEtn methyltransferases could be found in the finished genome sequence of P. falciparum, it remained unclear whether in vivo Pfpmt might also catalyze the three-step methylation of PtdEtn. In the present study we provide genetic and biochemical evidence demonstrating that the primary function of Pfpmt in vivo is to catalyze the methylation of P-Etn to form P-Cho. Six lines of evidence support this important conclusion. First, expression of Pfpmt in wild-type S. cerevisiae cells, which inherently lack P-Etn methyltransferase activity, resulted in their acquiring this activity. Second, PMT activity of wild-type yeast expressing Pfpmt was specific for P-Etn, and no methylation of ethanolamine or PtdEtn could be detected. Third, expression of Pfpmt in a yeast mutant, pem1
pem2
, lacking the two genes PEM1 and PEM2, which encode the enzymes Pem1 and Pem2 essential for the synthesis of PtdCho from PtdEtn, resulted in a complete suppression of their requirement for exogenous choline. Fourth, lipid analysis of the pem1
pem2
cells expressing Pfpmt demonstrated the synthesis of PtdCho in the absence of choline, but unlike the wild-type strain, no intermediates of the transmethylation of PtdEtn could be detected in the complemented strain. Fifth, the PtdEtn level in the pem1
pem2
strain expressing Pfpmt was almost double that of the wild-type cells, suggesting continuous accumulation of this phospholipid as a result of synthesis via phosphatidylserine decarboxylation and the CDP-ethanolamine pathway in conjunction with the elimination of PtdEtn methylation. Finally, complementation of pem1
pem2
choline auxotrophy by Pfpmt required a functional Kennedy pathway, because alteration of this pathway by mutation in the PCT1 gene abolishes this complementation.
The ability of Pfpmt to complement pem1
pem2
mutant depends on the availability of the P-Etn substrate. In fact, the growth of the complemented strain was much better when the medium was supplemented with ethanolamine (not shown). In the absence of exogenous ethanolamine, this precursor could be obtained either via degradation of sphingosine-1-phosphate by the lyase encoded by the DPL1 gene, or via hydrolysis of PtdEtn by the Ca2+-dependent phospholipase D activity. Interestingly, although the complemented and wild-type strains grew equally well in the absence of choline, the level of PtdCho (as percent total phospholipid) in the complemented strain was only
4% in the absence (not shown) and
12% in the presence (Fig. 6) of ethanolamine. In contrast PtdCho was
40% total phospholipid present in wild-type cells. These data suggest that although PtdCho is the major phospholipid in yeast membranes, its level in wild-type cells far exceeds what is needed for growth and survival, at least under laboratory conditions.
To enhance expression of Pfpmt in yeast, we completely redesigned its cDNA by reducing its A+T content from 72.5 to 51.3% to prevent early transcriptional termination. Successful expression of Pfpmt was demonstrated by inserting a V5-His6 tag in the C-terminal region of the encoded protein and monitoring expression levels using anti-V5 monoclonal antibodies. Pfpmt was further purified from yeast cells by affinity chromatography and used in enzymatic assays. Similar success in complementing yeast after codon optimization was achieved with PfGAT gene of P. falciparum, which encodes a glycerol-3-phosphate acyltransferase of the endoplasmic reticulum important for the initial step of malarial glycerolipid metabolism (25). Pfpmt purified from yeast exhibited the same biochemical properties as the native PMT activity obtained from P. falciparum or recombinant Pfpmt purified from E. coli (6).
Our present results are concordant with previous biochemical analysis using recombinant Pfpmt purified from E. coli and provide strong evidence that Pfpmt exhibits high specificity toward the P-Etn substrate and does not catalyze the methylation of PtdEtn in vivo. Thus it seems that the most critical precursor for the synthesis of PtdCho in P. falciparum is P-Cho, which can be obtained either via Pfpmt methylation of serine-derived P-Etn or by phosphorylation of choline transported by the parasite choline transporter from the host. The relative contribution of the two pathways to the total cellular pool of PtdCho is not yet clear. Recent studies have provided new information about the biochemical properties of the parasite choline transporter (31, 32). However, the genes encoding choline transport activity have not yet been identified in Plasmodium or any other protozoan parasite. More detailed genetic studies in P. falciparum are now needed to evaluate the importance of choline transport and Pfpmt in phospholipid synthesis as it relates to parasite development and survival.
In summary, we have shown that Pfpmt is a highly specific methyltransferase enzyme acting exclusively on P-Etn substrate in vivo. The essential dependence of the pem1
pem2
mutant on Pfpmt for growth and survival makes this strain an ideal system to screen for inhibitors that can specifically inhibit Pfpmt activity.
| FOOTNOTES |
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|| To whom correspondence should be addressed: Center for Microbial Pathogenesis, University of Connecticut Health Center, 263 Farmington Ave, Farmington, CT 06030. Tel.: 860-679-3544; Fax: 860-679-8130; E-mail: choukri{at}up.uchc.edu.
1 The abbreviations used are: PtdCho, phosphatidylcholine; PtdEtn, phosphatidylethanolamine; Pfpmt, P. falciparum phosphoethanolamine methyltransferase; AdoMet, S-adenosyl-L-methionine; P-Cho, phosphocholine; P-Etn, phosphoethanolamine; PtdIns, phosphatidylinositol; PMT, phosphoethanolamine methyltransferase; SDPM, serine decarboxylation-phosphoethanolamine methylation. ![]()
| ACKNOWLEDGMENTS |
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| REFERENCES |
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