![]()
|
|
||||||||
J. Biol. Chem., Vol. 280, Issue 24, 22993-22999, June 17, 2005
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||




From the Glycobiology Institute, Department of Biochemistry, University of Oxford, Oxford OX1 3QU, United Kingdom
Received for publication, April 18, 2005 , and in revised form, April 21, 2005.
| ABSTRACT |
|---|
|
|
|---|
| INTRODUCTION |
|---|
|
|
|---|
The binding properties of SRCL have only been partially characterized. Binding to oxidized low density lipoprotein particles has been demonstrated and, by analogy to the type A scavenger receptors, this activity has been attributed to the collagen-like domain (1). Binding to Gram-negative bacteria has also been associated with the collagen-like domain, because a variant form of the protein lacking CRDs still shows binding activity for bacteria when expressed in Chinese hamster ovary cells (2). Although the cytoplasmic domain of SRCL contains a potential endocytosis signal motif, conflicting data have been presented regarding the uptake of particulate ligands into cells (1, 2).
C-type CRDs fall broadly into two subgroups, those that bind galactose and related ligands and those that bind mannose, N-acetylglucosamine, and fucose. Mutagenesis of galactose-binding C-type CRDs, combined with studies in which the specificity of a mannose-binding CRD was converted to galactose binding, have led to the identification of a small set of residues that are essential for high affinity binding to galactose (3, 4). Examination of the sequence of SRCL reveals that all of these key residues are present.2 Thus, SRCL differs from DC-SIGN, the macrophage mannose receptor, serum mannose-binding protein, and other C-type lectins known to have roles in pathogen recognition, all of which fall into the second subgroup. Semiquantitative binding studies using cells expressing SRCL suggest that the receptor does bind sugar-containing ligands, with some preference for N-acetylgalactosamine (5).
The overall organization of SRCL shares features of both the type A scavenger receptors for modified low density lipoprotein and the collectins, which are soluble C-type lectins involved in pathogen recognition. The arrangement of domains in SRCL is most like the arrangement of the type A scavenger receptors, with the CRDs replacing cysteine-rich domains that are not related in sequence (6). Sequence comparisons reveal sequence similarities between the collagen-like and coiled-coil domains of SRCL and all three of the type A scavenger receptors, with particularly strong similarity to SR-A 3 (Fig. 1) (7). Although the collagen-like and coiled-coil domains would have similar elongated conformations in SRCL and the collectins, sequence comparisons provide no evidence for homology between SRCL and the collectins, and the domains are actually arranged in reverse order in the polypeptides. In addition, comparison of the CRD of SRCL with other C-type lectins shows that, in evolutionary terms, this domain falls within the family of type II transmembrane receptors that includes the asialoglycoprotein receptor, rather than forming part of the collectin cluster. Thus, it seems likely that the presence of similar domains in SRCL and the collectins represents independent gene shuffling events that have converged on a similar set of protein structural elements.
To assess the biological functions of SRCL, both the sugar-binding characteristics and intracellular trafficking properties of the receptor need to be better defined. To this end, the results of this study demonstrated that the CRD of SRCL binds with unusually high selectivity to glycans containing the Lewisx epitope, that the CRDs are clustered in a trimer, and that the receptor is able to direct uptake and degradation of glycoprotein ligands.
| EXPERIMENTAL PROCEDURES |
|---|
|
|
|---|
Cloning of SRCL cDNAcDNA encoding human SRCL was amplified from human placental cDNA (Clontech) in two sections using the following pairs of primers: N-terminal section forward, 5'-AACCCACGGTCACGGTCACCATGAAAGACGACTTCGCAG-3'; N-terminal section reverse, 5'-TTGAGCTGACCATGCTTGGAGTCTACTAGCTTC-3'; C-terminal section forward, 5'-AAGTGGTCATCATGAACCTCAACAACCTGAACCTG-3'; C-terminal section reverse, 5'-TTGCGGCCGCTTATAATGCAGATGACAGTACTGTCTCCCTGTC-3'. Following denaturation at 95 °C for 1 min, 40 cycles of 95 °C for 30 s, and 68 °C for 1 min were carried out. PCR products were cloned into the vector pCRIITOPO using the TOPO cloning kit (Invitrogen) and sequenced using an Applied Biosystems Prism 310 genetic analyzer. Segments of the cDNAs that were free of reverse transcription errors were combined using convenient restriction sites.
Expression of the CRD from SRCL in BacteriaThe region of the cDNA coding for the CRD only (from residue 603 to the C terminus) was amplified using the following primers: forward primer, 5'-AAGGCCGGCCGAGGACAATAGCTGCCCGCCTCACTGGAAG-3'; reverse primer, 5'-TTGCGGCCGCTTATAATGCAGATGACAGTACTGTCTCCCTGTC-3'. PCR products were digested at the FseI and NotI sites in the primers and inserted into a modified pINIIIompA2 expression vector containing restriction sites for FseI and NotI downstream of the ompA signal sequence (8). The correct reading frame was generated by digesting the vector with FseI, followed by trimming of the 3' extension with T4 polymerase and religation. The integrity of the final expression plasmid was verified by DNA sequencing. Luria-Bertani medium (1 liter), containing 50 µg/ml ampicillin, was inoculated with 30 ml of an overnight culture of Escherichia coli strain JA221 transformed with the expression plasmid. The culture was grown by shaking at 2530 °C to an A550 of
0.8, and isopropyl-
-D-thiogalactoside and CaCl2 were added to final concentrations of 50 µM and 100 mM, respectively. After growth, for a further 18 h at 2530 °C, the cells were harvested by centrifugation at 4,000 rpm for 15 min in a Beckman JS-4.2 rotor. Bacterial pellets were resuspended in cold 10 mM Tris-Cl, pH 7.8, followed by centrifugation at 12,000 rpm for 15 min at 4 °C in a Beckman JA14 rotor. Bacteria were sonicated in 30 ml of 20 mM Tris-Cl, pH 7.8, 0.5 M NaCl, 20 mM CaCl2 (loading buffer). Lysed bacteria were centrifuged at 10,000 x g for 15 min, and the supernatant was recentrifuged at 100,000 x g for 1 h at 4°C. The supernatant was passed over a 10-ml column of galactose-Sepharose (9) equilibrated in loading buffer. The column was washed with 10 x 2 ml of loading buffer and eluted with 10 x 2 ml of elution buffer (20 mM Tris-Cl, pH 7.8, 0.5 M NaCl, 2 mM EDTA). Fractions were analyzed by SDS-polyacrylamide gel electrophoresis. The CRD was identified by N-terminal sequencing on a Beckman LF3000 protein sequencer following transfer to polyvinylidene difluoride membranes (10).
Expression of the Extracellular Domain of SRCL in Chinese Hamster Ovary CellsDNA coding for the extracellular domain of SRCL, without the cytoplasmic tail and the transmembrane region, was produced by amplifying the region coding for the N-terminal section of the protein using the forward primer 5'-AAAGTTGTAGAGAAATGGACAATGTCACAGGTGCC-3' with the reverse primer described above and combining this section with the region coding for the C-terminal section amplified as above. The resulting DNA, coding for the entire extracellular domain of SRCL (starting at residue 60), was fused to codons specifying the dog preproinsulin signal sequence. The preproinsulin signal sequence has previously been shown to direct efficient secretion of other truncated receptors (11, 12). The modified cDNA was inserted into the vector pED between the XbaI and EcoRI sites following the region encoding the adenovirus major late promoter and preceding the region encoding the dihydrofolate reductase gene (13). The resulting plasmid was transfected into DXB11 Chinese hamster ovary cells (which are deficient in dihydrofolate reductase) using the calcium phosphate method (14). Transfectants were selected by growth in minimal essential
medium without nucleosides and supplemented with 10% (v/v) dialyzed fetal calf serum. Amplification of protein expression was achieved by passaging cells into medium containing increasing concentrations (up to 0.5 µM) of methotrexate over several weeks. For protein production, cells were grown in medium containing 0.5 µM methotrexate. Once the cells reached confluence, the medium was changed and batches of medium were harvested every 2 days for 8 days. Tris-Cl, pH 7.8, CaCl2, and NaCl were added to the medium to give final concentrations of 20 and 20 mM and 0.5 M, respectively. Following centrifugation at 10,000 rpm in a Beckman JA14 rotor for 15 min, the medium was loaded onto a 10-ml column of galactose-Sepharose equilibrated in loading buffer. The column was washed with loading buffer before elution with elution buffer.
Expression of Full-length SRCL in FibroblastsDNA coding for full-length SRCL was inserted into the retroviral expression vector pVcos (15) at the EcoRI site. The neomycin resistance gene, under the control of the herpes virus thymidine kinase promoter, was inserted into the resulting vector at the unique ClaI site (16). The final plasmid was transfected into
Cre packaging cells to produce a pseudovirus that was used to infect Rat-6 fibroblasts, and fibroblast lines stably expressing SRCL were selected using G418 (17). Cells were harvested by scraping, suspended in
10 volumes of 125 mM NaCl, 10 mM Tris-Cl, pH 7.5, and 0.5% Triton X-100, sonicated briefly, incubated 1 h at 4°C, and spun for 2 min at 18,000 x g. The supernatant was analyzed by SDS-polyacrylamide gel electrophoresis on a 12% gel, which was blotted onto nitrocellulose and probed with antibodies raised against the CRD (18).
Analytical UltracentrifugationEquilibrium sedimentation analysis was carried out in a Beckman Optima XL-A analytical Ultracentrifuge equipped with absorbance optics using an An60Ti rotor at 20 °C. Proteins were dialyzed extensively against 10 mM Tris-Cl, pH 7.8, 100 mM NaCl, 10 mM CaCl2. The extracellular domain of SRCL was analyzed at 5,000 and 8,000 rpm. For the CRD, rotor speeds of 10,000 and 21,000 rpm were used. Equilibrium distributions from three different loading concentrations (0.5, 0.25, and 0.125 mg/ml for the extracellular domain and 0.2, 0.1, and 0.05 mg/ml for the CRD) were analyzed simultaneously using the Nonlin curve fit program supplied with the instrument. Partial specific volumes for the SRCL fragments were determined from their amino acid composition and estimates of the extent of glycosylation (19).
Labeling of the Extracellular Domain of SRCLFor radio-iodination, the extracellular domain of SRCL,
100 µg of protein in 1.5 ml, was dialyzed against 150 mM NaCl, 25 mM HEPES, pH 7.8, 5 mM CaCl2 and reacted with 50 µCi of 125I-Bolton-Hunter reagent for 15 min at room temperature (20). Labeled protein was repurified by affinity chromatography on galactose-Sepharose. For fluorescent labeling,
250 µg of protein was dialyzed against water, lyophilized, dissolved in 0.5 ml of 0.5 M NaCl, 20 mM Na-bicine, 5 mM CaCl2, and reacted with 75 µg of fluorescein isothiocyanate that was dissolved at 1 mg/ml in dimethyl sulfoxide and added as five aliquots of 15 µl, followed by reaction overnight at 4 °C. EDTA was added to a concentration of 10 mM, and the labeled protein was repurified by gel filtration on a 10 x 300-mm Superdex 200 column (Amersham Biosciences) eluted with 0.1 M NaCl, 10 mM Tris-Cl, pH 7.8, 2.5 mM EDTA at a flow rate of 0.5 ml/min.
Probing of LigandsGlycoproteins were resolved on a 17.5% SDS-polyacrylamide gel and transferred to nitrocellulose. All of the glycoproteins were of bovine origin, except orosomucoid, which was from human serum. The blot was blocked at room temperature for 1 h with 2% bovine hemoglobin in wash buffer (125 mM NaCl, 25 mM Tris-Cl, pH 7.8, and 25 mM CaCl2) and reacted for 1 h with the radio-iodinated extracellular domain of SRCL in the same solution at a concentration of
1 µg/ml. The blot was washed four times for 5 min each with cold wash buffer, and radioactivity was detected using a phosphorimaging device from Molecular Dynamics. Neoglycolipids, prepared by coupling oligosaccharides to phosphatidylethanolamine dipalmitate, were resolved by thin layer chromatography and fixed with isobutylmethacrylate (21). The chromatograms were then blocked and probed as for the glycoprotein blots. Fluorescein-labeled extracellular domain was used to probe the glycan array following the standard procedure of Core H of the Consortium for Functional Glycomics.3
Solid Phase Binding AssaysPolystyrene wells were coated overnight with either CRD or the extracellular domain of SRCL at a concentration of
50 µg/ml in loading buffer. Neoglycoprotein reporter ligands were created by iodination (22). Binding competition experiments and determination of the pH dependence of binding were performed as previously described (17). Binding data were fitted using SigmaPlot software (Jandel Scientific).
Molecular ModelingThe crystal structure of the galactose-binding derivative of mannose-binding protein with bound galactose was used as a starting point (23). The structure of the Lewisx trisaccharide abstracted from the crystal structures of this ligand bound to DC-SIGN was used to model the ligand (24), although similar results were obtained using coordinates derived from the crystal structure of sialyl-Lewisx bound to E-selectin and from the NMR structure of the free oligosaccharide. The galactose moiety of Lewisx was manually superimposed onto the galactose in the mannose-binding protein structure using Insight II modeling software.
Endocytosis ExperimentsAnalysis of uptake and degradation of 125I-Gal-BSA or 125I-LNFP III-BSA by fibroblasts expressing SRCL was performed as described previously (25).
| RESULTS |
|---|
|
|
|---|
Weak binding to highly substituted sugar resins is often characteristic of monomeric forms of C-type lectins. Therefore, the oligomeric states of the fragments were analyzed by equilibrium analytical ultracentrifugation (Fig. 3). The results demonstrated that the CRD is monomeric, but the entire extracellular domain formed a stable trimer. This result is consistent with the presence of the collagen-like domain, which would be expected to direct trimerization. In addition, the sequence of the N-terminal portion of the extracellular domain was predicted to form a 3-stranded coiled coil of
-helices, which would further stabilize the trimer. The relatively weak binding of both the CRD and the extracellular domain to galactose-Sepharose contrasts with other galactose-binding C-type lectins, such as the asialoglycoprotein receptor and the Kupffer cell receptor. Both monomeric and trimeric fragments of these receptors bind tightly to this resin and can only be eluted with EDTA, indicating that these receptors have inherently higher affinity for galactose. These results suggest that galactose on its own is not an optimal ligand for SRCL.
Binding of SRCL to Lewisx and Related StructuresAn initial screening for higher affinity ligands was undertaken by testing the binding of SRCL to a selection of glycoproteins. The glycoproteins were resolved by SDS-polyacrylamide gel electrophoresis, blotted onto nitrocellulose, and probed with the radiolabeled extracellular domain of SRCL (Fig. 4). Strong binding to asialo-orosomucoid is evident, but no binding to other desialylated glycoproteins was detected. Binding to glycoproteins bearing sialylated complex, high mannose, or sulfated N-linked glycans was also not detected.
|
|
|
|
|
-methyl galactoside and
-methyl fucoside binding shows an even stronger preference for the galactose moiety, probably because the presence of the methyl group eliminates artifactual binding through the 1-hydroxyl group (27).
|
|
A weak binding interaction with the blood group H substances was also detected in the glycan array. Because these oligosaccharides do not contain terminal galactose residues, it was interesting to consider how they might be accommodated in the binding site. The fucose residue in these structures is attached to the 2 position of galactose, so the arrangement of coordination ligands with the 3- and 4-hydroxyl groups need not be perturbed. As no crystal structure with the H-type glycans has been reported, it is not possible to develop a detailed model of where the fucose residue is located. However, modeling of a fucose residue in linkage to the 2-hydroxyl group of galactose suggests that it can be accommodated and that it might make energetically favorable contacts with loop 5 or other residues on the surface of the CRD. Thus, the binding and modeling results provide a consistent picture of galactose- and fucose-containing oligosaccharides interacting with SRCL through a primary galactose-binding site and secondary contacts with fucose.
|
The cytoplasmic domain of SRCL contains the sequence Tyr-Lys-Arg-Phe, which is a potential target for binding of adapter proteins that direct receptors to clathrin-coated pits for endocytosis (29). Studies with other receptors suggest that, in addition to such sorting signals, clearance activity requires the receptor be capable of ligand release at endosomal pH. Therefore, the ability of SRCL to release ligand in a pH-dependent manner was examined (Fig. 9). The results demonstrate that binding of carbohydrate ligands to SRCL is extremely dependent on pH, with a midpoint for release of ligand at a physiological Ca2+ concentration of approximately pH 6.5. This value is very similar to that observed for the asialoglycoprotein receptor, DC-SIGN, and other C-type lectins that function in endocytosis (24, 30). The steepness of the curve suggests that the transition from a binding to a nonbinding conformation involves titration of multiple groups in the CRD.
|
| DISCUSSION |
|---|
|
|
|---|
helices (31). Because of the well established roles of several of the collectins in innate immunity, a similar role has been suggested for SRCL (1, 2). The results presented here, as well as the evolutionary considerations discussed in the Introduction, suggest that other possible functions for SRCL need to be considered. The fact that bacteria and yeast can interact with SRCL is consistent with a role in innate immunity (1, 2). However, it is important to note that SRCL is found on endothelial cells rather than cells such as macrophages or dendritic cells that are usually associated with the innate immune response. In addition, the way that SRCL interacts with microbes is very different from the way that the collectins bind to them. The CRDs of the collectins fall into the subcategory of C-type lectins that bind to mannose, GlcNAc, and related sugars (3). They bind weakly to individual sugars and achieve selective binding to the surfaces of bacteria and fungi by interacting with repeating arrays of sugars in the walls of these micro-organisms (32). The data on binding selectivity presented here indicate that the CRD of SRCL falls into the other subcategory of C-type CRDs, which bind galactose and related sugars in the primary binding site. This specificity is not typical of pathogen-binding molecules. Indeed, a truncated form of SRCL lacking the CRD seems to retain the ability to bind micro-organisms, leading to the suggestion that the binding site lies on the collagen-like domain (2). In contrast, the collagen-like domain of serum mannose-binding protein interacts with serine proteases that activate complement (33). Thus, SRCL differs from the collectins both in arrangement of domains and the functions of these domains.
|
|
The highly specific binding of SRCL to the Lewisx trisaccharide suggests other possible roles for this receptor in the selective clearance of specific desialylated glycoproteins from circulation or selective interaction of cells bearing Lewisx-type structures with the vascular endothelium. These roles would be more analogous to the functions of the asialoglycoprotein receptor (34) and the selectin cell adhesion molecules (35). Similar to the hepatic asialoglycoprotein receptor, SRCL has the ability to bind asialo-orosomucoid. Differences in the number of receptors may explain why the liver receptor normally provides the predominant route for clearance of this glycoprotein from circulation. SRCL might provide an alternative mechanism for clearance of some asialo-glycoprotein in asialoglycoprotein receptor-deficient mice (36, 37), although most asialoglycoproteins (which lack outer arm fucose residues) would not be taken up by this receptor.
The distribution of SRCL on vascular endothelial cells suggests parallels with the selectins, which bind to elaborated versions of the Lewisx trisaccharide, bearing sialic acid and sulfate groups (35). The restricted binding to a specific glycan structure suggests possible roles in cell adhesion analogous to the leukocyte-endothelial interactions mediated by the selectins. E- and P-selectin are selectively expressed at sites of inflammation, whereas SRCL seems to be constitutively expressed on a wide variety of endothelial cells, although possible modulation of SRCL expression remains to be investigated. Knowledge of the glycan-binding selectivity of SRCL will also allow further study of possible glycoprotein and cellular target ligands.
| FOOTNOTES |
|---|
Present address: Division of Molecular Biosciences, Imperial College, London. ![]()
To whom correspondence should be addressed: Division of Molecular Biosciences, Biochemistry Bldg., Imperial College, London SW7 2AZ, UK. Tel.: 44-20-7594-5281; Fax: 44-20-7594-5207; E-mail: maureen.taylor{at}imperial.ac.uk.
1 The abbreviations used are: SRCL, scavenger receptor C-type lectin; SR, scavenger receptor; CRD, carbohydrate-recognition domain; BSA, bovine serum albumin; LNFP, lacto-N-fucopentaose. ![]()
2 See www.imperial.ac.uk/research/animallectins for sequence alignments. ![]()
3 www.functionalglycomics.org. ![]()
| ACKNOWLEDGMENTS |
|---|
| REFERENCES |
|---|
|
|
|---|
This article has been cited by other articles:
![]() |
H. Feinberg, M. E. Taylor, and W. I. Weis Scavenger Receptor C-type Lectin Binds to the Leukocyte Cell Surface Glycan Lewisx by a Novel Mechanism J. Biol. Chem., June 8, 2007; 282(23): 17250 - 17258. [Abstract] [Full Text] [PDF] |
||||
![]() |
P. J. Coombs, M. E. Taylor, and K. Drickamer Two categories of mammalian galactose-binding receptors distinguished by glycan array profiling Glycobiology, August 1, 2006; 16(8): 1C - 7C. [Abstract] [Full Text] [PDF] |
||||
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| HOME | HELP |