|
Advertisement | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
J. Biol. Chem., Vol. 280, Issue 27, 25659-25664, July 8, 2005
Interactions of MotX with MotY and with the PomA/PomB Sodium Ion Channel Complex of the Vibrio alginolyticus Polar Flagellum*![]() ![]() From the Division of Biological Science, Graduate School of Science, Nagoya University, Chikusa-Ku, Nagoya 464-8602, Japan
Received for publication, January 7, 2005 , and in revised form, April 22, 2005.
Rotation of the sodium ion-driven polar flagellum of Vibrio alginolyticus requires the inner membrane sodium ion channel complex PomA/PomB and the outer membrane components MotX and MotY. None of the detergents used in this study were able to solubilize MotX when it was expressed alone. However, when co-expressed with MotY, MotX was solubilized by some detergents. The change in the solubility of MotX suggests that MotY interacts with MotX. In agreement with this, a pull-down assay showed the association of MotY with MotX. Solubilized MotX and MotY eluted in the void volume from a gel-filtration column, suggesting that MotX and MotY form a large oligomeric structure(s). In the absence of MotY, MotX affected membrane localization of the PomA/PomB complex and of PomB alone but not of PomA alone, suggesting an interaction between MotX and PomB. We propose that MotX exhibits multiple interactions with the other motor components, first with MotY for its localization to the outer membrane and then with the PomA/PomB complex through PomB for the motor rotation.
The bacterial flagellum is driven by a specific ion flow depending on the electrochemical potential (1, 2). Two types of coupling ions, protons and sodium ions, are known. The motor is embedded in the cytoplasmic membrane at the base of the flagellar structure and is composed of the stator and rotor components. The rotor consists of a rod and two ring structures termed the MS and C rings. Two additional rings, the L and P rings that are embedded in the outer membrane and the peptidoglycan layer, respectively, surround the rod and act as a molecular bushing of the rotor in Gram-negative bacteria. It has been proposed that the C ring, which is mounted onto the cytoplasmic face of the MS ring, is surrounded by the stator particles (3, 4). In the proton-driven motors of Escherichia coli and Salmonella, the stator part of the force-generating unit is composed of MotA and MotB (5, 6). MotA has four transmembrane segments and one large cytoplasmic region (7). MotB has a single N-terminal transmembrane segment, in which an important Asp is present to convey protons (8), and a peptidoglycan-binding motif at the C terminus (9, 10). Several extensive lines of genetic and physiological studies have shown that the transmembrane segments of MotA and MotB form a H+ channel complex (1113). The polar flagellum of Vibrio alginolyticus is driven by a sodium ion motor (1416). In this motor, PomA, PomB, MotX, and MotY are required for force generation (1720). PomA and PomB are orthologs of MotA and MotB, respectively. It has been shown that the PomA/PomB complex catalyzes sodium ion influx when the purified PomA/PomB complex is reconstituted into proteoliposomes (21). A complex formed from four PomA and two PomB molecules seems to act as a sodium ion channel. MotX and MotY have been identified in Vibrio sp. as specific motor proteins for the sodium ion-driven motor (22, 23). No homologues have been reported in E. coli or Salmonella. Recently, MotY homologues were reported in the lateral flagellar system of Vibrio sp., in which the coupling ions are protons, and in the flagellum of Pseudomonas aeruginosa (24, 25). MotY has a peptidoglycan-binding motif in the C-terminal region, which is also found in MotB and PomB (20). MotX and MotY seem to interact with each other, although direct evidence for this interaction has not yet been obtained (19, 23). Recently we have shown that the N-terminal segments of MotX and MotY are cleaved, and the mature proteins are fractionated with the outer membrane, suggesting that they are outer membrane proteins (26). The cytoplasmic region of MotA is postulated to interact with the rotor component FliG. Electrostatic interactions between conserved charges on FliG and those on MotA are important for the rotation of the proton-driven motor of E. coli (27). It is believed that both proton- and sodium ion-driven motors rotate by a similar mechanism because several chimeric motors composed of both types of components are functional (2830). However, amino acid substitutions in the conserved charged residues of PomA or FliG in the sodium ion-driven motor of V. alginolyticus do not abolish motility (31, 32). These discrepancies between the proton- and sodium ion-driven motors suggest that other charged residues are required for the flagellar rotation in the sodium ion-driven motor or that MotX and MotY compensate for the effects of the amino acid substitutions in PomA and FliG. If the latter is true, there may be some interactions among the motor proteins, although there is no evidence for interactions between MotX and/or MotY and the PomA/PomB complex. In this study, we have shown that MotX interacts with MotY and affects membrane localization of the PomA/PomB complex when MotY is absent. This is the first direct evidence for interaction of the inner membrane ion channel complex with the outer membrane component in the flagellar motor.
Bacterial Strains and Growth ConditionsThe E. coli strain JM109 was used for DNA manipulations (33). The V. alginolyticus strains used in this study are listed in Table I. V. alginolyticus cells were cultured at 30 °C in VC medium (0.5% Tryptone, 0.5% yeast extract, 0.4% K2HPO4, 3% NaCl, 0.2% glucose) or in VPG medium (1% Tryptone, 0.4% K2HPO4, 3% NaCl, 0.5% glycerol). The E. coli strains used for DNA manipulations and membrane localization experiments were cultured at 37 °C in LB medium (1% Tryptone, 0.5% yeast extract, 0.5% NaCl). When necessary, kanamycin was added to a final concentration of 100 µg/ml (for V. alginolyticus) or 50 µg/ml (for E. coli).
Plasmid ConstructionDNA manipulations were carried out according to standard procedures (35). Plasmids used in this study are listed in Table I. Plasmid pKJ402, which was constructed by PCR using synthetic oligonucleotide primers, encodes the C-terminal hexahistidine-tagged MotX (MotX-His6). The nucleotide sequence of 5'-CATCACCATCACCATCACTAAGGATCC-3' (the BamHI site is underlined) was inserted between the 3' end of the motX open reading frame and the BamHI site of plasmid pKJ401. Because this plasmid complemented a motX mutant of V. alginolyticus, the C-terminal His6 tag does not appear to perturb MotX function (data not shown). The 700-bp XbaI-BamHI fragment (containing motX-his6) of pKJ402 was inserted into pKJ502 (carrying motY) to construct a plasmid, pKJ602, that carries an artificial motY-motX-his6 operon. The 1.9-kb BamHI-SacI fragment (containing pomAB) of pYA303 was inserted into pKJ401 (carrying motX), constructing a plasmid, pMO711, that carries an artificial motX-pomAB operon. This BamHI-SacI fragment was inserted into pKJ502 (carrying motY) to construct a plasmid, pMO712, which carries an artificial motY-pomAB operon. The 0.8-bp BamHI fragment (containing pomA) of pYA301 was inserted into pKJ401 to construct a plasmid, pMO721, which carries an artificial motX-pomA operon. The 1.1-kb BamHI-SacI fragment (containing pomB) of pSK603 was inserted into pKJ401; the resultant plasmid, pMO722, carries an artificial motX-pomB operon. The motor genes of the plasmids constructed here do not have their native promoters and are under the control of the lac promoter operator. Transformation of Vibrio cells by electroporation was carried out as described previously (38). Membrane PreparationVibrio cells harboring plasmids were cultured at 30 °C in VPG medium. Cells were harvested, washed twice with V-buffer (25 mM Tris-HCl, pH 7.5, 10 mM MgCl2, 300 mM NaCl), and stored at 80 °C until use. The frozen cells were thawed and resuspended (0.2 g, wet weight/ml) in 20 mM Tris-HCl, pH 8.0, 5 mM MgSO4, 0.5 mM phenylmethylsulfonyl fluoride, 10 µg/ml DNase I. Membrane vesicles were prepared by subjecting the suspension to a single passage through a French press (5501-M Ohtake Works) at 500 kg/cm2 at 4 °C. Undisrupted cells were removed by low speed centrifugation (10,000 x g for 5 min at 4 °C), and the membrane fraction was recovered from the supernatant by ultracentrifugation at 100,000 x g for 2 h. The membrane pellet was suspended in 20 mM Tris-HCl, pH 8.0, 0.5 mM phenylmethylsulfonyl fluoride, 20% (w/v) glycerol and then homogenized and stored at 80 °C until use. Detection of ProteinsSDS-PAGE and immunoblotting were performed as described previously (34). The antibodies against MotX peptide and MotY peptide, which are referred to as MotX192 and MotY264, respectively, were prepared as described previously (19). Protein concentrations were determined with the BCA protein assay kit (Pierce).
Membrane Solubilization by DetergentsMembrane preparations
were suspended in 20 mM Tris-HCl, pH 8.0, containing 0 or 450
mM NaCl to yield final concentrations of 10 mg of protein/ml. After
72 different kinds of detergents from Detergent Screens 1, 2, and 3 (Hampton
Research) were added at 2-fold the critical micelle concentration, each
suspension was mixed gently overnight at 4 °C and centrifuged for 10 min
at 200,000 x g to separate the solubilized supernatant and the
insoluble precipitate. For solubilization of MotX or MotY, five detergents
were selected: n-heptyl-
Pull-down AssayMembranes from NMB94 harboring pKJ602 or
pKJ601 were suspended in 20TPG (20 mM Tris-HCl, pH 8.0, 0.5
mM phenylmethylsulfonyl fluoride, 10% (w/v) glycerol) containing 5
mM imidazole and 1.5% (w/v)
n-octyl-
Gel-filtration ChromatographyThe membrane fractions from
NMB94 harboring pKJ601 were suspended in 20 mM Tris-HCl, pH 8.0,
1.5% (w/v) n-octyl-
Membrane Localization of Motor ProteinsE. coli strain JM109
harboring plasmid pYA303, pMO711, pMO712, pSK603, pMO721, or pMO722 was grown
on LB medium at 37 °C to mid-exponential phase, and expression of motor
proteins was induced for 1 h by the addition of 1 mM isopropyl
Solubilization of MotX and MotYSome detergents such as Triton X-100 solubilized MotY. However, MotX was not solubilized by any detergents used so far (26). To carry out biochemical characterization of these proteins in more detail, we examined 72 different kinds of detergents to determine whether they solubilize MotX and MotY. Because we have examined solubilization in the presence of 150 mM NaCl in a previous study (26), in this study we examined detergents in the presence or absence of 450 mM NaCl. We found that eight detergents, six nonionic (n-heptyl- -D-thioglucoside,
n-octyl- -D-glucoside, CYMAL-3, MEGA-8,
n-hexyl- -D-glucoside, and MEGA-9) and two
zwitterionic (ZWITTERGENT 3-10 and FOS-choline-8), solubilized MotX and MotY
when co-expressed from a plasmid (Fig.
1 for the second and seventh detergents in the above list). MotX
and MotY were solubilized by these detergents only in the absence, but not in
the presence, of salt. From the detergents listed above, we used
n-heptyl- -D-thioglucoside,
n-octyl- -D-glucoside, MEGA-8, MEGA-9, and
ZWITTERGENT 3-10 to assess the solubility properties of MotX when it was
expressed alone. None of the detergents solubilized MotX alone
(Fig. 1 for the second and
fifth detergents in the above list), suggesting that the solubility of MotX
changed in the presence of co-expressed MotY, probably because of interactions
between MotX and MotY.
Interaction between MotX and MotYTo investigate whether MotX actually interacts with MotY, we performed a pull-down assay with MotX-His6. The binding efficiency of MotX-His6 to a Ni2+-NTA resin was very poor, and almost the same amount of MotX-His6 was recovered in the flow-through fraction as was in the applied materials (Fig. 2A, compare lanes 1 and 2). This may be because of sequestration of the C-terminal His6 tag by oligomerization of MotX (see below). However, a small but significant amount of MotX-His6 appeared in the elution fractions. Untagged MotY was also found in the elution fractions (Fig. 2A). On the other hand, neither MotX nor MotY was detected when untagged MotX and MotY were used, confirming that no nonspecific binding to the column occurred. Therefore, we conclude that MotX binds to MotY.
Analytical Gel-filtration Chromatography of MotX and MotYTo
estimate the molecular size of the MotX/MotY complex, the proteins solubilized
by n-octyl- The biochemical properties of MotY seemed to be drastically influenced by salt. Because most of MotY was present in the periplasmic space in soluble form in the absence of MotX (26), both membrane-bound (Fig. 4A) and soluble (Fig. 4B) MotY were analyzed by gel-filtration chromatography. Both forms eluted in the void volume in the absence of NaCl (Fig. 4, upper panels). On the other hand, in the presence of 300 mM NaCl, both membrane-bound and soluble MotY appeared in the fractions between albumin (67 kDa) and chymotrypsinogen A (25 kDa), which corresponds to the monomeric size of MotY (Fig. 4, lower panels). Similarly, the monomeric form of MotY was observed at the same concentration of KCl (data not shown). Alteration in Membrane Localization of PomA and PomB by Co-expression with MotXWhen co-expressed, MotX and MotY are detected in the outer membrane fraction after sucrose density gradient ultracentrifugation. In contrast, in the absence of MotY, MotX is detected in intermediate fractions between the inner and outer membrane fractions (26). When PomA, PomB, MotX, and MotY are expressed, MotX and MotY are mainly found in the outer membrane fractions, whereas PomA and PomB are present in the inner membrane fractions (26).
To test whether MotX and/or MotY affect membrane localization of the PomA/PomB complex, we carried out sucrose density gradient centrifugation experiments. The model organism E. coli was used because methods for the separation of the inner and outer membranes of V. alginolyticus are not as well established. OmpA and SecG were used as the diagnostic marker proteins for the outer and inner membranes, respectively. PomA and PomB were detected in the inner membrane fractions in the absence of both MotX and MotY (Fig. 5A). Next, E. coli cells expressing PomA, PomB, and either MotX or MotY were fractionated (Fig. 5, B and C). When PomA, PomB, and MotX were co-expressed, they were all detected in intermediate fractions between the inner and outer membrane fractions. On the other hand, when PomA, PomB, and MotY were co-expressed, MotY was found in the outer membrane, whereas PomA and PomB were detected in the inner membrane fractions. These results suggest that MotX, but not MotY, affects membrane localization of PomA and PomB. PomB was detected in the inner membrane fractions when it was expressed by itself (Fig. 6A). When PomB was co-expressed with MotX, PomB was detected in the same intermediate fractions as MotX, even in the absence of PomA (Fig. 6B). Co-expressed MotX did not affect membrane localization of PomA in the absence of PomB (data not shown), suggesting that in the absence of MotY, MotX binds to PomB but not to PomA.
Several observations have suggested that MotX interacts with MotY, although no direct evidence for such an interaction has been obtained (19, 23, 26). In this study, we attempted to characterize the biochemical properties of MotX and MotY in more detail. We searched for conditions under which detergents can solubilize these proteins. We tried 72 different kinds of detergents and found that co-expressed MotX and MotY were solubilized by eight different detergents in the absence of salt. In contrast, MotX alone was not solubilized by these detergents at all, indicating that MotY strongly affects the solubility of MotX. Pull-down assay showed that untagged MotY co-eluted with MotX-His6, indicating a direct interaction between these proteins. Because overexpression of MotX can suppress a series of motY mutations (19), it is suggested that MotY is involved in the proper targeting of MotX to the flagellar motor rather than in torque generation. In fact, MotX fails to localize to the outer membrane in the absence of MotY (26).
Analytical gel-filtration chromatography showed that MotX and MotY, either expressed from a plasmid or from the chromosome, eluted in the void volume, suggesting that MotX and MotY together form a large oligomeric structure(s). At the moment, it is not clear whether the MotX/MotY oligomer(s) correspond to a homogeneous complex or just an aggregate(s). However, it is interesting to note that the stator protein complex also exists as a large oligomer consisting of at least four PomA (MotA) and two PomB (MotB) proteins (21, 41, 42). It has been reported that overproduction of MotX is lethal to E. coli cells and that cell death caused by overproduction of MotX was dependent on the external NaCl or KCl concentration (23). The oligomeric state of MotY is also strongly influenced by salt concentration; it is monomeric in the presence of 300 mM NaCl or KCl, but it forms a large oligomeric structure(s) in the absence of salt and elutes in the void volume by gel-filtration chromatography (Fig. 4). Detergents that were able to solubilize the MotX/MotY complex worked only in the absence of salt (Fig. 1). Thus, salt concentration appears to be a key factor for the conformation and/or the oligomeric state of MotX, MotY, and the MotX/MotY complex. We have shown previously that when expressed alone, MotX is not fractionated with the inner or the outer membrane (26). Thus, MotX exhibits different cellular locations depending on whether or not MotY is present. In this study, we found that in the absence of MotY, MotX altered the membrane localization of the PomA/PomB complex and PomB, but not PomA, to fractions between the inner and outer membrane in sucrose density gradient centrifugation (Figs. 5B and 6B). This result suggests strongly that MotX binds to PomB. It is not clear whether the PomA/PomB complex and PomB are detached from the membrane vesicles or whether membrane vesicles containing PomA/PomB and PomB are isolated from those containing SecG (used as an inner membrane marker protein) and those containing OmpA (used as an outer membrane marker protein). It is possible, however, that MotX binds tightly to PomA/PomB or PomB, thereby pulling them toward the intermediate fraction when they are separated by sucrose density gradient centrifugation. In our previous studies of the chimeric flagellar motor, MotX and MotY have been shown to be required for the motor function if the periplasmic region of the chimeric B subunits derive from PomB (2830). Therefore, we suggest that MotX probably binds to the periplasmic region of PomB to make a functional stator. Thus, the interaction between PomB and MotX is physiologically relevant to the torque generation process, and therefore, MotX probably forms a part of the stator of the sodium ion-driven flagellar motor in Vibrio sp.
Based on the available information, we propose a mechanism of assembly and a functional state of the stator complex of sodium ion-driven motor (Fig. 7). (i) MotX forms a complex with MotY, which is then targeted to the outer membrane. (ii) MotX associated with the outer membrane interacts with the PomA/PomB complex in the inner membrane through the periplasmic region of PomB to produce torque. At the moment, we cannot rule out the possibility that MotY is dissociated from the complex because even in the absence of MotY, a less functional stator is formed by overproduction of MotX (19). It is likely, however, that MotY remains with MotX in the complex because MotX and MotY are fractionated together with the outer membrane when all of the four components are expressed (26). (iii) If MotY is absent, the MotX/PomA/PomB complex does not efficiently localize to an appropriate position in relation to the motor; therefore, the motor does not rotate fully.
* This work was supported by grants-in-aid for scientific research from the Ministry of Education, Science, and Culture of Japan, the Japan Science and Technology Corporation (to M. H. and T. Y.), and the Soft Nano-machine Project of Japan Science and Technology Agency (to T. Y. and M. H.). The costs of publication of this article were defrayed in part by the payment of page charges. This article must therefore be hereby marked "advertisement" in accordance with 18 U.S.C. Section 1734 solely to indicate this fact.
1 The abbreviation used is: Ni2+-NTA, nickel-nitrilotriacetic
acid.
We thank Hiroshi Nikaido (University of California, Berkeley) and Ikuro Kawagishi (Nagoya University) for stimulating discussions and encouragement and Tohru Minamino (Osaka University) and Hedda Ferris (Yale University) for careful reading of the manuscript and suggestions.
This article has been cited by other articles:
|
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
|
Advertisement | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||