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J. Biol. Chem., Vol. 280, Issue 29, 27436-27442, July 22, 2005
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From the
The Walter and Eliza Hall Institute of Medical Research, 1G Royal Parade, Victoria 3050, Australia, ¶Humboldt University of Berlin, Institute of Biology, Invalidenstrasse 42, 10115 Berlin, Germany, ||University of Leipzig, Medical Faculty, Institute of Medical Physics and Biophysics, 04103 Leipzig, Germany, **Max Planck Institute of Molecular Cell Biology and Genetics, 01307 Dresden, Germany, and
University of Stuttgart, Institute of Cell Biology and Immunology, Allmandring 31, 70569 Stuttgart, Germany
Received for publication, November 26, 2004 , and in revised form, May 20, 2005.
| ABSTRACT |
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| INTRODUCTION |
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Several cytosolic proteins with specific lipid binding domains capable of accelerating lipid exchange in vitro have been identified. These proteins include phosphatidylinositol and glycolipid transfer proteins, sterol carrier protein 2, and members of the steroidogenic acute regulatory protein (StAR1/StarD1)-related lipid transfer (START) domain family (4-8). Although phosphatidylinositol transfer proteins have been studied extensively and their role in vesicular transport and signaling has been demonstrated, the cellular function of most START domain proteins still remains elusive.
START domains are
210 amino acids in length and form a hydrophobic tunnel that accommodates a monomeric lipid (9-11). START domains have been found in 15 mammalian proteins (12). The best characterized family members include StAR/StarD1, which binds cholesterol and is required for cholesterol transport from the outer to the inner mitochondrial membrane (13), and phosphatidylcholine transfer protein (Pctp/StarD2), which is known to exclusively bind and transfer PC between membranes (4, 14). The Pctp subfamily of START domain proteins further comprises Goodpasture antigen-binding protein, StarD7, and StarD10 (12). Recently, a splice variant of the Goodpasture antigen-binding protein/StarD11, termed CERT, was identified to be defective in the Chinese hamster ovary mutant cell line LY-A (15). These cells demonstrate impaired sphingomyelin synthesis due to lack of CERT-mediated transfer of its precursor ceramide from endoplasmic reticulum to Golgi membranes. StarD7 was reported to interact with phospholipid monolayers, indicating a function related to lipid binding (16). Apart from a function in intracellular lipid transfer, START domains are hypothesized to act as lipid sensors with a regulatory role in signal transduction and transcription. For example, the START domain proteins DLC1/2 are candidate tumor suppressors with Rho-GAP activity that inhibit Rho-mediated assembly of actin stress fibers (17, 18). In plants, many homeodomain transcription factors contain START domains, whereby lipid/sterol binding is hypothesized to induce conformational changes to control transcriptional activity (19).
We identified the START domain protein, StarD10, to be overexpressed in Neu/ErbB2-induced mammary tumors in transgenic mice, in several human breast carcinoma cell lines, and in 35% of primary human breast cancers (20). Although StarD10 expression alone was not sufficient to transform cells, it potentiated cellular transformation when coexpressed with ErbB1/epidermal growth factor receptor by a yet unknown mechanism. Using intrinsic fluorescence measurements, we showed that StarD10 was capable of interacting with membranes (20), but the identity of lipid ligands was not explored. Here we characterize the lipid binding properties of StarD10 both in vitro and in vivo and demonstrate a dual specificity lipid transfer function for phosphatidylcholine (PC) and phosphatidylethanolamine (PE).
| EXPERIMENTAL PROCEDURES |
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Protein Expression and PurificationHuman StarD10 and Pctp cDNAs were cloned into pGEX-6P (Amersham Biosciences) and transformed into BL21 bacteria to produce glutathione S-transferase (GST) fusion proteins. Expression was induced with 0.5 M isopropyl-
-D-1-thiogalactopyranoside for 4 h at 30 °C. Bacteria were harvested and resuspended in phosphate-buffered saline containing 50 µg/ml lysozyme, Complete protease inhibitors (Roche Applied Science), 10 mM sodium fluoride, and 20 mM
-glycerophosphate. Triton X-100 was added to a final concentration of 1% before two freeze-thaw cycles and sonication. In the case of protein preparations for mass spectrometry, Triton X-100 was omitted. GST-StarD10 and GST-Pctp were purified from clarified lysate with glutathione resin. GST-StarD10 was cleaved with PreScission protease according to the manufacturer's instructions (Amersham Biosciences). Because PreScission cleavage of Pctp was inefficient, GST-Pctp was eluted with 20 mM reduced glutathione in 50 mM Tris, pH 8. The purity of protein preparations was verified by SDS-PAGE and Coomassie staining.
Lipid Binding AssaysTwo assays were employed to characterize protein-lipid interactions. First, spin-labeled lipids dissolved in chloroform/methanol (1:1, v/v) were dried under nitrogen and resuspended at a concentration of 180 µM in 150 mM NaCl, 5 mM Hepes, pH 7.2. Electron spin resonance (ESR) spectra in the absence and presence of StarD10 (molar ratio of lipid to protein, L/P = 3:1) were recorded at 25 °C using an ECS 106 spectrometer (Bruker, Karlsruhe, Germany) with the following parameters: modulation amplitude, 4 G; power, 20 milliwatt; scan width, 100 G; accumulation, 9 times. Extraction of the immobilized component from ESR spectra was performed as described previously (24). Second, lipid binding was monitored using a fluorescence resonance energy transfer assay. Small unilamellar vesicles (SUVs) (400 nmol total lipid/ml) composed of porcine brain lipids/C12-NBD-lipid/N-(lissamine rhodamine B sulfonyl)-dioleoylphosphatidylethanolamine (97.5:1:1.5 mol %) were prepared by sonication in 20 mM Hepes, pH 7.2, 100 mM NaCl, 5 mM EDTA using a Branson Sonifer 250 (Danbury, CT; 10 min; duty cycle, 20%; output control, 2). The vesicle suspension (6 nmol lipid/ml) was incubated at 37 °C. Fluorescence intensity was recorded at 535 nm (excitation, 479 nm; slit widths, 4 nm) in an Aminco Bowman Series 2 spectrofluorometer (SLM Instruments, Rochester NY) before and after the addition of 23 µg of StarD10 (L/P = 20). Maximal dequenching (Fmax) was obtained by adding 0.5% Triton X-100. The percentage of fluorescence dequenching (FDQ) was calculated as FDQ = (F+ - F-)/(Fmax - F-) x 100, where F- and F+ are the fluorescence intensities before and after the addition of the protein.
Lipid Transfer AssayProtein-mediated transfer of lipids between SUVs was measured essentially as described (25). The transfer assay mixture contained donor vesicles (2 nmol lipid/ml) composed of porcine brain lipids/pyrene-lipid/TNP-PE (89.5:0.5:10 mol %) and a 20-fold excess of acceptor vesicles composed of porcine brain lipids. Fluorescence intensity was recorded at 395 nm (excitation, 340 nm; slit widths, 4 nm) before and after the addition of 7.5 µg of StarD10 or Pctp at 37 °C. Fluorescence intensities were normalized to the maximum intensity obtained after the addition of Triton X-100 (0.5% final concentration).
Binding of Endogenous LipidsVero cells were grown in Dulbecco's modified Eagle's medium (Invitrogen) supplemented with 10% fetal bovine serum, 100 units/ml penicillin, and 100 µg/ml streptomycin and were radiolabeled with [14C]acetic acid (37 kBq/ml; 17 nM; Amersham Biosciences) for 48 h. After washing the cells with phosphate-buffered saline containing 0.5 mg/ml bovine serum albumin, total cellular lipids were extracted by the method of Bligh and Dyer (26), and SUVs were prepared by sonication in 20 mM Hepes, pH 7.2, 100 mM NaCl, 5 mM EDTA. SUVs were determined to contain 55% PC, 10% PE, 11% neutral lipids/cholesterol, 5% glycolipids, 3% PG/phosphatidic acid, and 3% sphingomyelin by measuring the amount of phospholipid phosphorus (27). The vesicle suspension was incubated with purified StarD10 (230 µg/300 nmol of total phospholipid) or Pctp (115 µg/150 nmol of total phospholipid) for 60 min at 25 °C. For MALDI-TOF mass spectrometry, vesicles composed of porcine brain were prepared and incubated with purified StarD10 (1150 µg/1.5 µmol of total phospholipid) for 60 min at 25 °C. The protein was separated from the lipid vesicles by centrifugation at 1000 x g for 30 min using a Centricon 100-kDa cut-off filter (Millipore, Bedford, MA). Lipid vesicles were recovered for analysis by centrifugation of the inverted filter at 1,000 x g for 2 min. Control experiments without protein showed that the vesicles were completely retained by the filter since no phospholipid was detected in the filtrate. Lipids were extracted from the filtrate (26) and separated by one-dimensional thin layer chromatography (TLC) using chloroform, methanol, water (65:25:4, v/v) or subjected to MALDI-TOF mass spectrometry. The TLC plates were dipped in 0.4% 2,5-diphenyloxazol dissolved in 2-methylnaphthalene supplemented with 10% xylene (28) and exposed to Hyperfilms MP (Amersham Biosciences) films at -80 °C. The individual lipids were identified by comparing with commercial standards (Sigma). The ratio of PC and PE bound to StarD10 was determined by scraping off spots and scintillation counting.
MALDI-TOF Mass SpectrometryA 0.5 M 2,5-dihydroxybenzoic acid solution in methanol containing 0.1% trifluoroacetic acid was used as matrix (29, 30). Lipid extracts were evaporated to dryness and then re-dissolved in the same volume of matrix solution. For analysis of PC and PE species, brain lipid extracts were subjected to TLC before MALDI-TOF mass spectrometry. Samples were spotted onto HP-TLC silica gel 60 plates (Merck) and separated using chloroform/ethanol/water/triethylamine (30:35:7:35, v/v). The plates were sprayed with PRIMULINE (Direct Yellow 59) to visualize phospholipids. PE and PC were identified by their typical RF values of 0.47 and 0.15, respectively (31). These spots were scraped off, and phospholipids were eluted by intense vortexing with a mixture of 75 µl of chloroform, 75 µl of methanol, and 75 µl of 0.9% aqueous NaCl. After phase separation, the organic layer was evaporated to dryness, and lipids were redissolved in 20 µl of matrix solution (see above). 1-µl droplets were applied to the MALDI target and allowed to crystallize. Drying of samples with a moderate warm stream of air improved the homogeneity of crystallization. All MALDI-TOF mass spectra were acquired on a Voyager Bio-spectrometry DE work station (PerSeptive Biosystems, Framingham, MA). The system utilizes a pulsed nitrogen laser, emitting at 337 nm. The extraction voltage was 20 kV, and the "low mass gate" was turned on to prevent the saturation of the detector by ions resulting from the matrix. For each mass spectrum, 128 single laser shots were averaged. The laser strength was kept about 10% above threshold to obtain the best signal-to-noise ratio. To enhance the spectral resolution, all spectra were measured in the reflector mode.
In Vivo Lipid BindingHuman embryonic kidney (HEK-293T) cells were grown in Dulbecco's modified Eagle's medium containing 10% fetal calf serum (Invitrogen). The cells were transiently transfected with pEF1
expression vectors encoding FLAG-tagged StarD10 or FLAG-tagged Pctp using Lipofectin reagent following the manufacturers' instructions (Invitrogen). 24 h post-transfection cells were labeled with 200 µCi of [3H]choline and 10-azi-stearic acid for 16 h in delipidated medium (32). Cells were washed with phosphate-buffered saline containing 0.5 mg/ml bovine serum albumin and irradiated for 2 min with UV light at 4 °C. Cells were scraped into hypotonic 20 mM Hepes buffer, pH 7.2, supplemented with Complete protease inhibitors and sheared using a 25-gauge needle, and lysates were then clarified by centrifugation at 12,000 x g for 15 min. Immunoprecipitation was performed by incubating lysates after the addition of NaCl to a final concentration of 120 mM with anti-FLAG monoclonal antibody (Sigma). Immune complexes were captured using protein G-Sepharose and washed 4 times with buffer containing 120 mM NaCl, 20 mM Hepes, 1% Triton X-100, protease inhibitors, pH 7.2. Immunoprecipitates were separated by SDS-PAGE. Before drying and autoradiography, the gel was incubated in 1 M sodium salicylate and 1% glycerol. An aliquot of the immunoprecipitates was separated by SDS-PAGE and transferred to a polyvinylidene difluoride membrane for analysis by Western blotting. Membranes were blocked in phosphate-buffered saline containing 5% milk and 0.1% Tween 20 before incubation with anti-FLAG antibody followed by incubation with horseradish peroxidase-conjugated secondary antibody (Bio-Rad) in the same buffer. For detection of secondary antibodies, the ECL plus kit (Amersham Biosciences) was used, and fluorescence was scanned on a FLA-3000 Fuji Imaging System (Raytest, Straubenhardt, Germany) equipped with a 488-nm laser and a 515-nm long pass emission filter. Image analysis was performed using Aida Image Analyser 3.24 software (Raytest, Straubenhardt, Germany).
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| RESULTS |
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Because ESR utilizes lipids in solution, we next employed an assay based on the principle of fluorescence resonance energy transfer to analyze the interaction of StarD10 with PC and PE in membranes. Here, lipid analogs labeled with an NBD fluorescent energy donor at their fatty acid tail were incorporated into SUVs in the presence of head group-labeled rhodamine-PE, which functioned as the energy acceptor. Due to the close proximity of the fluorescent donor/acceptor pair, energy transfer to rhodamine resulted in significant quenching when NBD fluorescence was excited. Upon the addition of StarD10 to these vesicles (L/P = 20), a rapid increase in the NBD fluorescence was observed, which was most likely due to protein-mediated extraction of NBD-labeled lipids from vesicles, allowing fluorescence emission to occur. NBD fluorescence intensity was highest in the case of NBD-PC and was lower for NBD-PE, whereas only a small increase in NBD fluorescence was observed for NBD-PG. In comparison, Pctp displayed the reported specificity for PC in membranes containing other phospholipid species. For both proteins, quantification of lipid binding relative to that of PC is shown in Fig. 2. START domain proteins such as StAR and MLN64 have been shown to bind cholesterol. Using dehydroergosterol, a natural cholesterol analog with intrinsic fluorescence, and TNP-PE as a fluorescence quencher, we did not observe binding of StarD10 to sterols (data not shown). Taken together, these results indicate that StarD10 is capable of interacting with phospholipids in solution and in membranes, with a preference for PC and PE.
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2-fold higher than for PE, which is in accordance with the binding preferences observed using NBD lipids.
To obtain additional information on the fatty acid chain composition of phospholipids preferentially extracted by StarD10, we analyzed organic extracts of recombinant StarD10 protein before and after incubation with brain lipid vesicles by MALDI-TOF mass spectrometry. Separation of StarD10 from the vesicles was performed by membrane filtration as described above. Selected positive ion MALDI-TOF spectra are shown in Fig. 3B. It is evident that the organic extract of the control filtrate did not contain any lipids (Fig. 3B, trace a). The only detectable peak at m/z = 727 corresponded to a typical matrix oligomerization product, whose chemical origin was described previously (34). This peak was present in all spectra and is marked with an asterisk. Recombinant StarD10 analyzed directly after purification from bacteria was identified to contain mainly PE and PG (Fig. 3B, trace b). This is in accordance with the lipid composition of bacterial membranes, which lack PC but contain
80% PE and 15% PG. When StarD10 was incubated with porcine brain lipid vesicles before lipid extraction, PG was completely exchanged, and StarD10 was found to contain both PC and PE (Fig. 3B, trace c). The identified phospholipid species are summarized in Table I. The main PC lipid species could be assigned to PC 16:0/18:1 (m/z = 760.6 and 782.6), PC 18:0/18:2 (m/z = 786.6 and 808.6), and PC 18:0/20:4 (m/z = 810.6 and 832.6), reflecting the PC lipid species present in porcine brain (Supplemental Fig. 1A and Supplemental Table 1). Interestingly, saturated PC (16:0/16:0) was not extracted by StarD10. The protein was further identified to bind PE 18:0/18:2 (m/z = 766.5 and 788.5) and PE 16:0/18:1 (m/z = 762.5 and 784.5), whereas PE species containing long unsaturated fatty acyl chains on the sn-2 position were not selected. These abundant brain lipid species include PE 16:0/20:4, 16:0/22:5, 16:0/22:6, 18:0/20:4, and 18:0/22:6. For example, the porcine brain lipids displayed similar peak heights for PE 18:0/18:2 (m/z = 766.5 and 788.5) and PE 16:0/20:4 (m/z = 746.5), whereas the StarD10 lipid spectrum contained peaks at 766.5 and 788.5 but at best a strongly reduced peak at 746.5 (Fig. 3B, Supplementary Fig. 1B and Supplemental Table I). These data demonstrate that StarD10 favors lipids containing a palmitoyl or stearoyl chain on the sn-1 position and an unsaturated fatty acyl chain on the sn-2 position (18:1 and 18:2). Estimation of the contribution of the individual phospholipid classes, however, is difficult since each phospholipid species has a different desorption and ionization tendency (34).
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StarD10 Mediates Lipid Transfer between MembranesFinally, we sought to determine whether StarD10 possessed phospholipid transfer activity. In a fluorescence resonance energy transfer-based assay similar to the one described in Fig. 1B, the transfer rate of fluorescently labeled lipid analogs from donor vesicles to unlabeled acceptor vesicles was measured. Because C12-NBD-labeled lipid analogs displayed a high rate of spontaneous transfer (data not shown), we used donor vesicles that contained pyrene-labeled lipids as the fluorescence donor and head group-labeled TNP-PE as a fluorescence quencher (35). The presence of TNP-PE caused significant reduction of pyrene fluorescence. When these donor liposomes were mixed with an excess of unlabeled acceptor liposomes, the increase in pyrene fluorescence observed over time was negligible, indicating minimal spontaneous transfer (data not shown). Likewise, the addition of albumin, which has nonspecific lipid binding sites, did not mediate intervesicular transfer of labeled lipids (Fig. 5A, trace c). Upon the addition of StarD10, a steady increase in fluorescence intensity was noted in the case of pyrene-PC (Fig. 5A, trace a). StarD10 was also capable of transferring pyrene-PE with an
3-fold lower rate than that of PC (Fig. 5A, trace b). Pyrene-labeled glycosylceramide did not serve as substrate (data not shown), confirming the specificity of the transfer assay and further proving that the fluorescence increase was not due to StarD10-mediated transfer of TNP-PE or fusion between donor and acceptor vesicles. In vitro lipid transfer rates of StarD10 for different phospholipids were quantified and compared with those of Pctp (Fig. 5B). Although both proteins efficiently transferred PC and promoted very low transfer of sphingomyelin, Pctp completely failed to transfer PE. Taken together, our data show that StarD10 displays phospholipid binding and transfer specificities that are distinct from those of Pctp.
| DISCUSSION |
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We have previously shown that incubation of StarD10 with brain lipid liposomes resulted in a decrease of its intrinsic tryptophan fluorescence at 335 nm (excitation 280 nm), indicating a conformational change upon interaction with lipids (20). This proved that interaction with phospholipids was not restricted to lipid analogs but extended to naturally occurring lipids. Using a photolabeling approach, we could now visualize the interaction of StarD10 with endogenous PC in vivo. In contrast to Pctp, only a proportion of StarD10 appeared to be stably complexed with PC. One interpretation of this difference is a lower affinity of StarD10 for membrane surfaces. In addition, StarD10 was likely to be engaged in interactions with PE that cannot be monitored under these assay conditions.
By incubating StarD10 with donor membranes generated with radiolabeled endogenous lipids from Vero cells, we demonstrate that StarD10 is able to selectively extract PC and PE. Compared with PC, the intensity of the PE signal was 10-fold weaker (Fig. 3A). However, if the lower abundance of PE is taken into account, the affinity of StarD10 for PE is significant. In intact cells, various organellar membranes display striking differences not only in their lipid composition but also in the distribution of lipids between leaflets. For example, membranes of late secretory organelles display an asymmetric lipid distribution with PE concentrated in the cytoplasmic leaflet, where it is readily accessible for protein-mediated exchange (1, 2).
MALDI-TOF mass spectrometry revealed that recombinant StarD10 protein purified from E. coli contained both PE and PG. In lipid binding assays, NBD-labeled PG was identified as a very poor ligand for StarD10. In agreement with this, PG was completely exchanged for PC and PE after incubation of purified StarD10 with brain lipid vesicles. Despite the very selective lipid binding properties of Pctp, the recombinant protein purified from bacteria was also found to bind PG and PE (14), suggesting that START domains are always occupied by a lipid molecule and that lipids may be required for correct protein folding. Indeed, a 1:1 stoichiometry of lipid binding has been reported for Pctp (14, 36). This is supported by structural studies demonstrating that START domains form a hydrophobic tunnel large enough to accommodate a single lipid molecule (9-11). Upon incubation with brain lipids, the phospholipid species selected by StarD10 carried palmitoyl or stearoyl chains on the sn-1 position and oleoyl or linoleoyl chain on the sn-2 position, whereas unsaturated PC was not bound. A similar preference for saturated fatty acids on the sn-2 position has been reported for Pctp (14, 37). In addition, PC 18:0/20:4 was bound by StarD10, whereas PE species containing long poly-unsaturated chains on the sn-2 position did not serve as ligands.
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-hexosaminidase A-mediated hydrolysis of sphingolipids (41). For example, overexpression of phosphatidylinositol transfer protein-
in NIH3T3 cells was shown to activate phospholipase A2, resulting in increased formation of lysophosphatidylinositol and accelerated growth of cells (42). In a similar vein, StarD10 may enhance the activation of specific phospholipases in the cell, thereby contributing to aberrant lipid signaling and cellular transformation. | FOOTNOTES |
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The on-line version of this article (available at http://www.jbc.org) contains Supplemental Fig. 1 and Table 1. ![]()

To whom correspondence should be addressed: Humboldt University of Berlin, Institute of Biology, Dept. of Cell Biophysics, Invalidenstrasse 42, 10115 Berlin, Germany. Tel.: 49-30-2093-8326; Fax: 49-30-2093-8585; E-mail: thomas.pomorski{at}rz.hu-berlin.de.
1 The abbreviations used are: StAR, steroidogenic acute regulatory protein; START, StAR-related lipid transfer; ESR, electron spin resonance; PC, phosphatidylcholine; Pctp, phosphatidylcholine transfer protein; PE, phosphatidylethanolamine; PG, phosphatidylglycerol; NBD, 7-nitro-2,1,3-benzoxadiazol-4-yl; SL, spin-label; StarD10, START domain-containing 10; SUV, small unilamellar vesicle; TLC, thin layer chromatography; MALDI-TOF, matrix-assisted laser desorption ionization time-of-flight; PA, phosphatidic acid; SM, sphingomyelin. ![]()
| ACKNOWLEDGMENTS |
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, R., Fuchs, B., Müller, M., Zschörnig, O., and Arnold, K. (2003) Chromatographia 57, (suppl.) 297-302[CrossRef]
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