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J. Biol. Chem., Vol. 281, Issue 15, 9963-9970, April 14, 2006
A Novel Hematopoietic Granulin Induces Proliferation of Goldfish (Carassius auratus L.) Macrophages* 1 1 ¶2
From the
Departments of
Received for publication, January 23, 2006 , and in revised form, February 9, 2006.
Granulins are a group of highly conserved growth factors that have been described from a variety of organisms spanning the metazoa. In this study, goldfish granulin was one of the most commonly identified transcripts in the differential cross-screening of macrophage cDNA libraries and was preferentially expressed in proliferating macrophages. Unlike mammalian granulins, which possess 7.5 repeats of a characteristic signature of 12 cysteine residues, the goldfish granulin encoded a putative peptide possessing only 1.5 cysteine repeats. Northern blot and real-time PCR analyses indicated that goldfish granulin was expressed only in the hematopoietic tissues of the goldfish, specifically the kidney and spleen, and in activated peripheral blood mononuclear cells. We expressed granulin using a prokaryotic expression system and produced an affinity-purified rabbit anti-goldfish granulin IgG. Recombinant goldfish granulin induced a dose-dependent proliferative response of goldfish macrophages that was inversely related to the myeloid differentiation stage of the cells studied. The highest proliferative response was observed in macrophage progenitor cells and monocytes. This proliferative response of macrophages was abrogated by the addition of anti-granulin IgG. These results indicate that goldfish granulin is a growth factor that positively modulates cell proliferation at distinct junctures of macrophage differentiation.
First identified as small (6 kDa) peptides, granulins are produced by the proteolysis of a larger precursor molecule by leukocyte derived elastase activity (17). The larger precursor is known by several names, including granulin/epithelin precursor (8), proepithelin (9), acrogranin (10), PC cell-derived growth factor (PCDGF) (11), and progranulin. Granulins have a unique 12-cysteine motif that is arranged in four -hairpins, stacked one upon another in a helical formation and connected via a central rod of disulfide bonds (1214). Structurally, granulins are distinct from most growth factors, with the exception of the epidermal growth factor/transforming growth factor- family (13). In addition to the mammalian granulins of human (1, 6), rat (2, 12), mouse (10, 15), and horse (16), granulin-like proteins have been identified in a number of non-mammalian organisms including the nematode Caenorhabditis elegans (17), the locust (18), the mussel (19), the marine worm Hediste diversicolor (20), and teleosts (bony fish) (2123). Granulin-like motifs have also been identified in multiple thiol protease gene sequences from plants (24, 25). The mammalian progranulin genes are ubiquitously expressed in various tissues (910, 2629) and have been detected in epithelial and hematopoietic cell lines (2629) and neoplastic cells (3036). Progranulin was shown to be highly expressed in epithelial cells that exhibit rapid turnover, such as the columnar epithelium of the gastrointestinal tract (29) and the cells of the immune and nervous systems (2122, 37). In general, granulin gene sequences that encode for functional peptides are progranulin genes. There are a number of published granulin-like sequences identified in lower vertebrates as well as invertebrates (e.g. zebrafish, GenBankTM accession numbers AF273479 [GenBank] and AF273480 [GenBank] ). Although a number of granulin genes have been identified in lower vertebrates and invertebrates, many of the peptides encoded by these genes have yet to be functionally characterized. We report on a unique granulin-like gene of the goldfish. Northern blot, real-time PCR, and RT-PCR3 analyses revealed that this granulin gene was expressed exclusively in the hematopoietic tissues of the goldfish. Recombinant goldfish granulin induced dose-dependent proliferation of primary goldfish macrophages in vitro, which was abrogated by an affinity-purified anti-granulin IgG. Our findings indicate that granulin was present in macrophage culture supernatants and that it promoted growth of cells at discrete stages of myeloid differentiation pathway.
FishGoldfish (Carassius auratus) were purchased from Mt. Parnell Fisheries Inc. (Mercersburg, PA) and maintained at the Aquatic Facility of the Department of Biological Sciences, University of Alberta. The fish were kept at 20 °C in a flow-through water system and fed to satiation daily with trout pellets. The fish were acclimated to this environment for at least 3 weeks prior to use in experiments. Isolation of Primary Macrophages from Goldfish and RNA IsolationIsolation of goldfish kidney leukocytes, and the generation of primary kidney macrophages (PKM) and peripheral blood mononuclear cells were performed as previously described (3842). The kinetics of PKM growth in culture were similar to those reported for mammalian macrophages derived from bone marrow cultures in the presence of conditioned medium from the L-929 fibroblast cell line (43). Three distinct macrophage subpopulations are a feature of PKM cultures: the early progenitors, the monocytes, and mature macrophages (44, 45). PKM cultures were incubated at 20 °C until the cells were at a stage of active proliferation (proliferative phase) or nonproliferation (senescence phase), typically 6 and 10 days post-cultivation, respectively. PKM from the proliferative and senescence phases were isolated, flash-frozen using liquid nitrogen, and stored at 80 °C until used. The mRNA for the two macrophage subpopulations was isolated using TRIzolTM reagent (Invitrogen) and the Oligotex mRNA isolation kit (Qiagen) according to the manufacturers' specifications.
Generation of Macrophage-activating Factor (MAF) SupernatantsMAF supernatants were prepared using protocols described previously (41). These supernatants contain a complex mixture of factors that have been functionally characterized and shown to induce antimicrobial responses of goldfish macrophages (4142).
Construction of cDNA Libraries of Primary Kidney Macrophages of GoldfishComplementary DNA libraries were constructed from 2 µg of proliferative or senescence phase PKM poly (A)+ RNA by directional ligation of PKM cDNA into DNA Sequencing and AnalysisThe PCR-amplified clone inserts corresponding to each of the confirmed granulin positive clones were purified using the QIAquick PCR purification kit (Qiagen) and sequenced using a DYEnamicTM ET terminator cycle sequencing kit (Amersham Biosciences) and a PE-Applied Biosystems 377 automated sequencer. Sequences were analyzed using GenetoolTM (Biotools) and subsequent gene annotations were conducted using BLAST programs (www.ncbi.nlm.nih.gov/BLAST/). Conserved motifs were identified, and predictions were based on analytical tools provided in the ExPASy proteomics server (www.expasy.org) (47). Sequence alignments were performed using ClustalX, version 1.83.
Real-time PCR Analysis of Granulin ExpressionReal-time PCR analysis was carried out using the Applied Biosystems 7500 Fast real-time PCR system. The relative expression of goldfish granulin in relation to RT-PCR Analysis of Goldfish Granulin Expression in MacrophagesCultured PKM were sorted into early progenitor, monocyte, and mature macrophage subpopulations using a FACSCalibur flow cytometer (BD Biosciences) as described previously (39, 44, 45), and the RNA was isolated immediately after sorting. First-strand synthesis was done using an oligo(dT) primer (Stratagene, La Jolla, CA) with 2.5 µg of total RNA according to manufacturer's protocols. The primers used to amplify goldfish granulin by RT-PCR were: sense 5'-AAGATGGTTCCAGTGTTGATGTTAC-3', antisense 5'-ACCCCACTGGCCGGCTGCTGT-3'.
Northern Blot AnalysisTwenty five µg of total RNA was subjected to electrophoresis on a 1.5% agarose, 20% formaldehyde gel and transferred overnight to Genescreen Plus nylon membranes (PerkinElmer Life Sciences). Blots were screened using 200 ng of a goldfish granulin probe created using RT-PCR. The probe was singly labeled using [ Prokaryotic Expression of Goldfish GranulinGoldfish granulin was expressed using a prokaryotic protein expression system. PCR amplification of the protein expression construct insert was performed as follows. 7 µl of the granulin clone template was added to 76 µl of double-distilled H2O, dNTPs (0.2 µl each of dATP, dCTP, dGTP, dTTP in 100 mM solutions), 10x PCR buffer (10 µl of 100 mM Tris-HCl, pH 8.3, 500 mM KCl, 15 mM MgCl2, 0.01% (w/v) gelatin), and expression primers (2.4 µl of each 20 µM solution (sense, 5'-CACCCTCATGGCAGCTCTTGTAG-3'; antisense, 5'-ACGGGGGTTGTTTACTTAC-3') and a 15:1 ratio of Taq:Pfu DNA polymerases (1 µl of 5-unit solution). PCR amplification was conducted in an Eppendorf Mastercycler GradientTM thermal cycler. Amplification was confirmed by agarose gel electrophoresis.
The granulin amplicon was cloned into the pET SUMO TA expression vector (Invitrogen) and transformed into chemically competent TOP10 Escherichia coli (Invitrogen) according to the manufacturer's specifications. Cells were plated onto LB-ampicillin (100 µg/ml) plates and incubated overnight at 37 °C. Randomly selected colonies were amplified by PCR, and positive clones were grown overnight in 5 ml of LB medium containing 100 µg/ml ampicillin. Plasmids were isolated using a QIAprep Spin Miniprep kit (Qiagen). Once positive clones were isolated, restriction digests followed by gel electrophoresis verified the presence of insert and vector DNA. Plasmids were sequenced, as described above, to confirm that inserts were ligated into the expression vector in the proper orientation and in-frame. Sequence data were analyzed using Genetool (Biotools).
Production of Recombinant GranulinPlasmid DNA containing the granulin expression construct was transformed into BL21 StarTM(DE3) One Shot® E. coli (Invitrogen) for recombinant protein expression. 10 ng of plasmid DNA was transformed into the bacteria, which was then grown overnight at 37 °C in LB medium containing 50 µg/ml kanamycin. Induction of recombinant protein expression was performed in a pilot expression experiment by the addition of isopropyl-
For large scale expression and purification of the target proteins, 50 ml of LB medium containing 100 µg/ml carbenicillin was grown overnight at 30 °C with shaking to an A600 of Recombinant granulin was engineered to contain a N-terminal His6 tag to facilitate subsequent detection and purification. Bacteria were removed by centrifugation at 2000 x g, and supernatants were collected. Granulin was purified from culture supernatants using MagneHIS beads (Promega) according to the manufacturer's specifications. Purified proteins were eluted in a solution containing 100 mM HEPES and 500 mM imidazole and then were dialyzed overnight against 1x phosphate-buffered saline. Protein samples were then filter-sterilized in preparation for immunodetection and analysis of biological activity. Total protein concentrations were determined using a bicinchoninic acid protein assay kit (Pierce) according to the manufacturer's protocols. Immunodetection of Recombinant Goldfish Granulin (rgfGrn)rgfGrn was used as a source of antigen for rabbit immunizations. The primary immunization was performed by combining an equal volume of purified recombinant granulin (100 µg), with 750 µl of Freund's complete adjuvant. Booster injections were done exactly as the primary immunizations but substituted with Freund's incomplete adjuvant. The IgG fraction was purified by precipitation using saturated ammonium sulfate, solubilization of precipitate in phosphate-buffered saline, and purification using a HiTrap protein A HP column (Amersham Biosciences) according to the manufacturer's protocol. Fractions containing IgG were pooled and filter-sterilized (0.22 µm filter, Millipore). The specificity of the antibody was determined by immunoblot using as a target rgfGrn under native and denaturing conditions.
rgfGrn and native goldfish granulin (4x concentrated macrophage culture supernatants) were detected by immunoblot analysis using an anti-His6 monoclonal antibody (Invitrogen) or with affinity-purified rabbit anti-goldfish rgfGrn IgG. Briefly, proteins were separated by SDS-PAGE under reducing conditions using 12.5% polyacrylamide gels, transferred to 0.2-µm nitrocellulose membranes (Bio-Rad), and incubated overnight at 4 °C in the presence of the primary antibody. Membranes were subsequently washed, incubated with a horseradish peroxidase-conjugated monoclonal antibody, and developed using the ECL AdvanceTM Western blotting detection kit (Amersham Biosciences) according to the manufacturer's specifications. Induction of Proliferation of Macrophages by Recombinant GranulinPKM cultures were established, and distinct differentiation stages were sorted by fluorescence-activated cell sorting and seeded at a density of 1 x 104 cells well1 in 96-well culture plates (Falcon). Cells were seeded in 50 µl of complete culture medium and treated with 5, 50, 100, 250, and 500 ng of recombinant goldfish granulin suspended in 50 µl of incomplete cell culture medium and incubated for 52 h at 20 °C. Fifteen µl of bromodeoxyuridine labeling reagent (BrdUrd, Roche Applied Science) per well was added, and cells were incubated for an additional 24 h at 20 °C. The reaction was developed according to the manufacturer's specifications, and optical densities were determined at 450 nm using a microplate spectrophotometer (Biotek). The colorimetric reaction was directly proportional to the number of proliferating PKM in culture (data not shown). The induction of macrophage proliferation by rgfGrn was determined after the addition of different amounts (1, 10, 50, 100, 300, 500 ng) of anti-rgfGrn to cultures.
The most common transcript identified in differential cross-screening of proliferative and senescence phase goldfish macrophage cDNA libraries was granulin (Fig. 1). Thirty-one partial granulin-like transcripts were identified, and all exhibited higher expression in proliferating macrophages. All of the transcripts were sequenced and found to be identical. The fully sequenced cDNA transcript of goldfish granulin is 947 nucleotides in length with an open reading frame of 477 nucleotides. The predicted protein is 159 amino acids long and had 18 conserved cysteine residues, 12 of which represent a full granulin cysteine motif common for all known granulin proteins. The remaining 6 cysteine residues make up one-half of this motif (Fig. 2). The granulin sequence has been submitted to GenBankTM (accession number DQ369750 [GenBank] ). The predicted goldfish granulin protein possessed conserved amino acids found in granulins spanning the metazoans. Granulins have been identified in mammals, fish, insects, bivalves, and nematodes. The amino acid sequence alignment of goldfish granulin and other known fish granulins of carp, zebrafish, and goldfish intestine show highly conserved cysteine-rich motifs (Fig. 3B). Goldfish granulin was most similar to carp granulin 3, with an amino acid identity of 56%. Of all the granulins analyzed, goldfish granulin shared the highest identity with other fish granulins (Fig. 3A), a finding that was supported by phylogenetic analysis that grouped the goldfish granulin in close proximity to carp granulins 2 and 3 (Fig. 4). Phylogenetic analysis also suggested that all fish granulins share distinct features that separate them from the granulins of mammals. Although the granulin proteins identified in carp and from goldfish intestine have no corresponding mRNA transcript sequences, zebrafish granulins 1 and 2 and zebrafish hybrid granulin had transcript organization similar to that of goldfish granulin.
The expression of goldfish granulin transcript was analyzed by Northern blot, RT-PCR, and real-time PCR. Analysis of transcript expression in the heart, brain, spleen, kidney, gill, liver, and intestine revealed that goldfish granulin was expressed primarily in the kidney and the spleen (Fig. 5). Real-time PCR and RT-PCR analyses of granulin expression were also done using non-activated and activated macrophages and sorted goldfish macrophage subpopulations. Goldfish granulin expression was up-regulated in activated macrophages and activated peripheral blood mononuclear cells compared with non-activated controls (Fig. 6, A and B). Interestingly, goldfish granulin was expressed primarily in the monocyte subpopulation, with lower expression evident in mature macrophages and the early progenitor cells (Fig. 6, C and D).
To examine the effect(s) of granulin on fish macrophage development in vitro, we generated recombinant goldfish granulin using a prokaryotic expression system. The ability of rgfGrn to induce a proliferative response of goldfish macrophages was tested by adding different amounts (5500 ng) of the rgfGrn to newly established cultures of sorted early progenitor cells, monocytes, and mature macrophages. The proliferation assays were done using eight separate PKM cultures established from individual fish (n = 8). All optical density values were normalized to those of untreated control cells. The proliferation responses depended on the differentiation stage of macrophages treated with recombinant granulin. For example, rgfGrn induced significant proliferative response in progenitor cells (3-fold increase over crude cell conditioned medium by day 8) (Fig. 7A) and lower but significant proliferation in monocytes cultures (1.6-fold increase over cell conditioned medium by day 8) (Fig. 7B). In contrast, the mature macrophage subpopulation did not proliferate in the presence of rgfGrn (Fig. 7C). No increase in proliferation of cultured macrophages was observed in the presence of the vector control (Figs. 7 and 8A).
The rgfGrn was used to generate an affinity-purified anti-rgfGrn rabbit IgG. The anti-His6 (Fig. 8B, lane 1) and anti-rgfGrn IgG recognized rgfGrn (21 kDa; granulin plus additional vector sequence) as well as an unknown bacterial protein of an approximate molecular mass of 31 kDa (Fig. 8B, lane 2). Interestingly, the immunoblot analysis using anti-rgfGrn IgG as a probe showed that the native goldfish granulin was present in goldfish macrophage culture supernatants, indicating that the molecule was secreted by actively growing macrophages (Fig. 8B, lane 3). The addition of known amounts of anti-rgfGrn IgG abrogated the proliferative response of macrophages in a dose-dependent manner (Fig. 8C).
In this study, we report on a novel granulin gene of the goldfish. Granulin was the most common transcript identified during differential cross-screening of the goldfish macrophage proliferative and senescence phase libraries (47). Granulins were first purified from the extracts of human inflammatory cell exudates, and from rat bone marrow (1). To date, seven granulin peptides (A to G) have been characterized (9, 10, 26, 27), and it has been shown that they are generated following proteolytic cleavage of progranulin (7). The two main differences between goldfish granulin and mammalian progranulin were: (a) the goldfish granulin gene encoded for a much smaller protein (159 amino acids); and (b) unlike mammalian progranulin, which has been shown to be expressed ubiquitously in different tissues, the goldfish granulin expression was limited to hematopoietic tissues (kidney and spleen) and blood mononuclear cells. Furthermore, goldfish granulin was found to be differentially expressed in different macrophage subpopulations and to promote growth of macrophages; this was inversely related to their stage of maturation/differentiation. The presence of granulin proteins in hematopoietic tissues of the carp has been reported: granulin-1, which was found mainly in extracts of the spleen; and granulins 1, 2, and 3, which were present in extracts of the head kidney (21). Furthermore, antibodies generated against carp granulin-1 appeared to recognize mononuclear cells in the head kidney of carp (2122). Sequence data from zebrafish granulins (GenBankTM accession numbers AF273479 [GenBank] and AF273480 [GenBank] ) suggest that this fish species possesses two genes that encode granulin proteins. Similar to the goldfish granulin, zebrafish granulins 1 and 2 possess 1.5 cysteine repeats, which may be the possible orthologs of goldfish granulin (49). Given that the expression of goldfish granulin was up-regulated in proliferating macrophages and that granulin was present in macrophage culture supernatants, we hypothesized that granulin may play a role in cell proliferation. Indeed, the recombinant granulin induced a significant and dose-dependent proliferative response in early progenitor and monocyte subpopulations in vitro, indicating that this molecule may contribute to the regulation of goldfish macrophage hematopoiesis. Progranulin was shown to be involved in different stages of embryonic development (4851) and in sexual differentiation of the rat brain via actions on the ventromedial hypothalamus (5254), and it may be a trigger for rat copulatory behavior (55). Progranulin induced the proliferation of embryonic fibroblasts (R-cells) obtained from mice that lack functional insulin-like growth factor-1 receptor (IGF-1). Progranulin was shown to be the only growth factor capable of inducing the proliferation of R-cells in the absence of IGF-1 and platelet-derived growth factor (56), through the activation of the p44/42 mitogen-activated protein kinase and the phosphatidylinositol 3-kinase pathways and induction of cyclin D1 and cyclin B. Interestingly, these pathways are involved in the signaling cascade for IGF-1 and thus may be the reason that progranulin can act in place of IGF-1 (8, 57, 58). Progranulin was shown to participate in inflammatory responses by inducing cellular migration during wound healing (4, 59, 60). Although the multifunctional nature of the progranulin was well characterized, a receptor for progranulin has yet to be identified.
Progranulin cannot only exert its biological effects as an intact protein but also can generate multiple functions as a result of proteolytic cleavage and production of functional smaller granulin peptides. For example, epithelin 1/granulin A (Epi1/GrnA) was shown to induce the proliferation of murine keratinocytes as well as rat kidney cells NRK-SA6 in the presence of transforming growth factor The structure, distribution, and function of the goldfish granulin transcript identified in this study set it apart from known mammalian granulins. Its obvious association with the hematopoietic organs of the goldfish and up-regulation in cells that are undergoing proliferation suggest that it may be an important growth factor during hematopoiesis in goldfish. Furthermore, the up-regulation of granulin expression after activation of macrophages and high expression in monocytes suggest that goldfish granulin, like mammalian granulin, may be involved in inflammation and wound repair events. Whether goldfish granulin can modulate the inflammation and wound healing events is currently under investigation in our laboratory.
* This work was supported in part by a grant from the Natural Sciences and Engineering Council of Canada (NSERC) (to M. B.). The costs of publication of this article were defrayed in part by the payment of page charges. This article must therefore be hereby marked "advertisement" in accordance with 18 U.S.C. Section 1734 solely to indicate this fact.
The nucleotide sequence(s) reported in this paper has been submitted to the GenBankTM//EBI Data Bank with accession number(s) DQ369750
[GenBank]
.
1 Supported by a NSERC doctoral scholarship. 2 To whom correspondence should be addressed: Dept. of Biological Sciences, CW-405 Biological Sciences Bldg., University of Alberta, Edmonton, Alberta T6G 2E9, Canada. Tel.: 780-492-1266; Fax: 780-492-9234; E-mail: mike.belosevic{at}ualberta.ca.
3 The abbreviations used are: RT, reverse transcription; PKM, primary kidney macrophage; MAF, macrophage-activating factor; Grn, granulin; rgfGrn, recombinant goldfish granulin; IGF-1, insulin-like growth factor 1; Epi, epithelin.
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