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J. Biol. Chem., Vol. 281, Issue 18, 12242-12247, May 5, 2006
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1

¶2
From the
Department of Pathology and ¶Department of Biochemistry and Molecular Biology, University of Southern California, Los Angeles, California 90089 and the
Center for Molecular Toxicology and Carcinogenesis and Department of Veterinary and Biomedical Sciences, The Pennsylvania State University, University Park, Pennsylvania 16802
Received for publication, November 22, 2005 , and in revised form, March 1, 2006.
| ABSTRACT |
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| INTRODUCTION |
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Upon DNA binding, the AHR/ARNT dimer recruits multiple coactivator complexes to the promoter of AHR-responsive genes (1, 6). Each coactivator complex constitutes a signal transduction pathway that transmits the activating signal from the AHR to specific downstream targets in the transcription machinery. For example, a member of the SWI/SNF complex, the Brahma/SWI2-related gene 1 protein (Brg-1), has been reported to be involved in transcriptional activation by AHR and participates in the remodeling of chromatin conformation around the promoter by means of an ATPase activity (12). The TRAP-DRIP-mediator complex also plays a physiological role in AHR-mediated gene transcription by recruiting and activating RNA polymerase II (13). Other transcription coactivators, such as p160 coactivators, p300/CBP, RIP140, CoCoA, and TRIP230, have also been shown to be involved in transcriptional activation by AHR (1418).
GRIP1-associated coactivator 63 (GAC63), is a newly identified nuclear receptor (NR) coactivator (19). GAC63 (also known as human embryonic lung protein or HUEL) interacts with the bHLH-PAS domain of p160 coactivators as well as the ligand binding domain of some NRs, such as estrogen receptor and androgen receptor. Overexpression of GAC63 enhanced transcriptional activation by NRs in a hormone-dependent manner. Although GAC63 can interact with NR directly, its coactivator function depends on the presence of a p160 coactivator with an intact bHLH-PAS domain. Thus, it functions as a secondary coactivator in NR-mediated gene transcription. Because p160 coactivators and AHR share bHLH-PAS domains, we investigated the possibility that GAC63 is also a coactivator in AHR-mediated transcription. We report here that GAC63 interacts with AHR and functions as a primary coactivator in AHR-mediated gene transcription, i.e. its coactivator function is independent of the presence of p160 coactivators or any other coactivators. Endogenous GAC63 is recruited to the XRE region of an AHR-responsive gene and is important for optimal transcriptional activation by AHR.
| EXPERIMENTAL PROCEDURES |
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GST Pull-down Assay[35S]Methionine-labeled full-length AHR, GAC63, and their fragments were synthesized in vitro by using TNT-Quick-coupled transcription/translation system (Promega) according to the manufacturer's protocol. GST pull-down assays were performed as described previously (17, 19).
Endogenous Coimmunoprecipitation and ImmunoblottingHepa1c1c7 cells, hereafter referred to as Hepa-1 cells, were lysed in radioimmune precipitation assay buffer. Cell lysates were cleared with protein A/G beads (Santa Cruz Biotechnology) for 1 h at 4°C. 2 µg of rabbit anti-GAC63 antibody (19) or normal rabbit IgG (Santa Cruz Biotechnology) was added to the cell lysates and incubated overnight at 4 °C on a rotator. 30 µl of protein A/G beads were added and incubated for another 3 h. Beads were washed three times with radioimmune precipitation assay buffer and subjected to SDS-PAGE. Blots were probed with anti-AHR antibody (Affinity BioReagents).
Transient Transfection AssayHepa-1 cells were maintained in
-minimal essential medium supplemented with 10% fetal bovine serum and 100 units of streptomycin and penicillin/ml. Typically, 500 ng of the CYP1A1 promoter-driven luciferase vector, pGudluc 6.1, was transfected alone or in combination with increasing amounts of pSG5.HA-GAC63 (0.1, 0.5, 1.0, or 2.0 µg) into 6-well plates using 15 µl of Superfect reagent (Qiagen) as per manufacturer's instructions. For synergy studies with GRIP1, cells were cotransfected with reporter and either 0.5 or 1.0µg of pCMX-GRIP1 alone, or 0.5 or 1.0 µg each of pCMXGRIP1 and pSG5.HA-GAC63. Final DNA concentration was equalized by the addition of empty plasmid vector. Three hours after transfection, cells were washed once in phosphate-buffered saline, and the medium was replaced. Cells were treated with either 5 nM TCDD or 0.1% dimethyl sulfoxide (Me2SO) and incubated for an additional 20 h at 37 °C. Cells were washed once with phosphate-buffered saline and harvested in 300 µl of 1x cell lysis buffer (25 mM Tris-phosphate (pH 7.8), 2 mM dithiothreitol, 2 mM 1,2-diaminocyclohexane-N,N,N',N'-tetraacetic acid, 10% (v/v) glycerol, 1% (v/v) Triton X-100). The lysates were vortexed, and cellular debris was pelleted by high speed centrifugation in a table-top microcentrifuge. Twentyµl of supernatant was added to 100µlof luciferase assay substrate (Promega, Madison, WI), and luciferase activity was determined using a TD-20e Luminometer (Turner Systems, Sunnyvale, CA). Each transfection was performed in duplicate, and the experiments were repeated two additional times.
Chromatin Immunoprecipitation AssayChromatin immunoprecipitation assays were performed with Hepa-1 cells from one 15-cm dish treated with or without 10 nM TCDD for 60 min as described previously (17, 19), using 5 µl of anti-AHR antibody MA1-513 (Affinity Bioreagents), 2 µg of anti-GAC63 antibody 1bg, or 2 µg of normal rabbit IgG. Immunoprecipitated, purified, chromosomal DNA was used for PCR amplification, using the following primers: CYP1A1 (1141/784), 5'-CTATCTCTTAAACCCCACCCCAA-3' (forward) and 5'-CTAAGTATGGTGGAGGAAAGGGTG-3' (reverse);
-actin (527 to 205), 5'-ATTGCTAGCAATTGCTAGCAAGGGGGAGT-3' (forward) and 5'-GAGAGAAAGCGAGATTGAGGAAGAGGATGA-3' (reverse). Quantitative real time PCRs (QPCR) were performed with 2 µl (from a total of 50 µl) of immunoprecipitated chromosomal DNA with a Stratagene Mx3000P Instrument, using the same primers as for standard PCR.
RNA InterferenceRNA interference experiments were performed as described previously (17, 19) using Lipofectamine 2000 (Invitrogen). Small interfering RNA (siRNA) oligonucleotides for GAC63 and mismatch siRNA were synthesized by the USC Norris Comprehensive Cancer Center Microchemical Core Laboratory and annealed to form duplexes. The following siRNA sequences were used: siGAC63, 5'-GCUCUUGCCAGAGAGAAAAdTdT-3' (sense) and 5'-UUUUCUCUCUGGCAAGAGCdTdT-3' (antisense). Mismatch siRNA, 5'-GGUCUUGUCAGACAGAAAAdTdT-3' (sense) and 5'-UUUUCUGUCUGACAAGACCdTdT-3' (antisense) (mismatched bases are underlined). Two days after siRNA transfection, Hepa-1 cells were treated with or without TCDD. Twenty-four hours after TCDD treatment, total Hepa-1 cell RNA was extracted with TRIzol reagent (Invitrogen), and subjected to reverse transcription by using iScript cDNA Synthesis Kit (Bio-Rad). 2 µl of reverse transcription product was subjected to quantitative real-time PCR (QPCR) analysis. The primers used were as follows: mouse GAC63, 5'-TGGTATCATGGAATCATGGG-3' (forward), 5'-TGCTCCTTCAGACACCAAAG-3' (reverse); mouse CYP1A1, 5'-GGCCAGACCTCTACAGCTTC-3' (forward), 5'-CTCACGTGCTCCTCCAAGTA-3' (reverse); mouse
-actin, 5'-AGTGTGACGTTGACATCCGT-3' (forward), 5'-CTTGCTGATCCACATCTGCT-3' (reverse). Cell extracts were also tested by immunoblotting using anti-GAC63 and anti-actin antibodies.
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| RESULTS |
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To test for binding in intact cells in culture, we performed endogenous coimmunoprecipitation assays using the mouse liver cell line Hepa1. Specific binding of GAC63 to AHR was detected without TCDD treatment when anti-GAC63 antibody was used for immunoprecipitation (Fig. 1C). No enhancement of binding was detected in the presence of TCDD (data not shown). These results suggest that GAC63 interacts with AHR in intact cells in culture.
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We also tested the GAC63 interaction domain within AHR using GST pull-down assays. The N-terminal fragment of AHR (amino acids 1374) specifically bound to GST-GAC63, whereas the C-terminal fragment (amino acids 375805) only showed weak binding (Fig. 2C). These data suggest that the N-terminal bHLH-PAS domain of AHR is the major GAC63 interaction domain.
GAC63 Functions as a Coactivator in AHR-mediated TranscriptionGAC63 is a secondary coactivator in NR-mediated gene transcription. Although it can bind NR directly, its coactivator function depends on the presence of GRIP1. Moreover, GRIP1 has been reported to be a coactivator in AHR-dependent gene activation. To test whether GAC63 also functions as a coactivator in this pathway, we performed transient transfection assays in AHR/ARNT-positive Hepa-1 cells to study the effect of overexpression of GAC63 on AHR-mediated gene transcription. Hepa1 cells were transfected with a CYP1A1 promoter-driven luciferase reporter plasmid (pGudluc 6.1) and either empty vector or increasing amounts of GAC63 expression vector alone or in combination with GRIP1 expression vector, with or without TCDD treatment. TCDD treatment alone enhanced CYP1A1 promoter-driven luciferase activity
8-fold (Fig. 3, assay 1). As expected, overexpression of GRIP1 enhanced the ligand-dependent activity of AHR (Fig. 3, assays 6 and 7). Interestingly, unlike in NR-mediated transcription, overexpression of GAC63 enhanced AHR activity up to 7-fold in a ligand-dependent and dose-dependent manner, in the absence of GRIP1 (Fig. 3, assays 25). The combination of GAC63 and GRIP1 did not further enhance AHR activity (Fig. 3, assays 8 and 9). These data suggest that although GAC63 is a secondary coactivator in NR-mediated transcription, it functions as a primary coactivator in AHR-dependent gene activation.
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-actin promoter region failed to produce a signal from the same immunoprecipitated chromatin fractions. QPCR analysis confirmed the TCDD-dependent recruitment of AHR and GAC63 to the native, chromosomally integrated XRE region of CYP1A1 gene (Fig. 4B).
GAC63 Is Important for Efficient Transcriptional Activation by AHROverexpression of GAC63 enhances AHR-regulated reporter gene expression (Fig. 3). To test for a physiological role of endogenous GAC63 in the process of transcriptional activation by AHR, we performed siRNA experiments to decrease the expression of endogenous GAC63. The GAC63 siRNA specifically reduced the level of endogenous GAC63 mRNA (Fig. 5A, upper panel) and protein (Fig. 5B), whereas the mismatch siRNA did not. The expression of AHR-regulated CYP1A1 gene was inhibited by 40% in the presence of GAC63-directed siRNA but not affected by an equivalent amount of mismatch siRNA (Fig. 5A, lower panel). A similar result was obtained with another pair of siRNAs, one targeting a different region of GAC63 and the other a scrambled-sequence control (data not shown). The effect on CYP1A1 gene expression was specific, because the results shown are normalized to the level of
-actin transcripts. Thus, although GAC63 is only one of several known coactivators for AHR, endogenous GAC63 makes an important contribution to the efficient transcriptional activation of endogenous genes by AHR.
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| DISCUSSION |
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In the present study, we showed that GAC63, a newly identified nuclear receptor coactivator, also functions as a coactivator in transcriptional activation by AHR. In our study, GAC63 interacts with AHR in a ligand-independent manner (Fig. 1). Several other transcription coactivators, such as p160 coactivators and CoCoA, have been shown to interact with AHR in a similar manner (14, 17). The human orthologue of GAC63, HUEL, has several potential nuclear localization signals and is primarily cytoplasmic in interphase cells, but it undergoes nuclear translocation during the S-phase of the cell cycle (20). Because AHR undergoes nuclear translocation upon ligand binding, it is possible that GAC63 exists in a complex with unliganded AHR and travels with liganded AHR into nucleus. We also tested the interaction between GAC63 and ARNT in GST pull-down assays, and found that GAC63 also interacts with ARNT directly in vitro (data not shown). However, we failed to detect their interaction in intact cells in culture using coimmunoprecipitation assays. Whether GAC63 binds to ARNT within the context of the AHR/ARNT heterodimer bound to DNA will need to be determined.
A previous study (19) has shown that although GAC63 can interact with NR directly, its coactivator function in NR-mediated transcription depends on the presence of p160 coactivators. Interestingly, overexpression of GAC63 alone enhanced AHR activity in a ligand-dependent and dose-dependent manner, in the absence of GRIP1. When GAC63 was cotransfected with GRIP1, no synergy was observed (Fig. 3). However, we cannot rule out the possibility that GAC63 and GRIP1 may function synergistically as coactivators for AHR/ARNT under different conditions. Thus, GAC63 functions as a primary coactivator in AHR-mediated transcription, whereas it serves as a secondary coactivator in transactivation by NR.
Endogenous GAC63 was recruited to the XRE region of the CYP1A1 gene in a ligand-dependent manner (Fig. 4), and reduction of endogenous GAC63 by siRNA inhibited the expression of CYP1A1 gene by 40% (Fig. 5). This partial inhibition could be because of residual GAC63, or the compensatory effects by other transcription coactivators, such as p300/CBP, BRG-1, p160 coactivators, Med220, and CoCoA, which are also known to mediate AHR function. Thus, we conclude that GAC63 is important for optimal transcriptional activation by AHR and is a physiological part of AHR-mediated gene transcription.
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AHR, ARNT, and p160 coactivators all belong to bHLH-PAS gene family (4, 5). Our findings suggest that GAC63 might also interact with other members of bHLH-PAS gene family, and serve as a general coactivator for all the bHLH-PAS transcription factors. Future studies of the physical and functional interaction between GAC63 and other bHLH-PAS proteins will help us to understand the transactivation mechanisms of the bHLH-PAS gene family and their functions in regulating target gene expression. Furthermore, GAC63 might also function as a coactivator for transcription factors other than the bHLH-PAS transcription factors. The nature of the downstream targets and the specific components of the transcription machinery that are regulated by GAC63 are currently under investigation in our laboratory.
AHR-mediated gene transcription proceeds in a manner similar to NR-mediated transcription (6). Although AHR and NR have different ligands and target genes, they share a variety of transcriptional coactivators. For example, acetyltransferase p300/CBP, SWI/SNF ATPase subunit BRG-1, p160 coactivators, mediator subunit Med220, CoCoA, and TRIP230 are all involved in both AHR- and NR-mediated gene transcription (1, 6, 1218). GAC63 provides another example of a transcriptional coactivator that is involved in both signaling pathways. Furthermore, TCDD has been shown to antagonize functions of several nuclear receptors, including estrogen receptor (22), androgen receptor (23), progesterone receptor (24), and peroxisome proliferator-activated receptor-
(25). The antagonistic effect by TCDD could be due to competition for coregulators, in addition to other proposed mechanisms, such as enhanced ligand metabolism, down-regulation of nuclear receptor levels, transrepression, and altered hormone synthesis (6, 2628).
| FOOTNOTES |
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1 Supported by predoctoral fellowships from the University of Southern California/Norris Breast Cancer Research Training Program. ![]()
2 To whom correspondence should be addressed: Dept. of Biochemistry and Molecular Biology, MCA-51A, University of Southern California, 1333 San Pablo St., Los Angeles, CA 90089-9151. Tel.: 323-442-1289; Fax: 323-442-1224; E-mail: stallcup{at}usc.edu.
3 The abbreviations used are: AHR, aryl hydrocarbon receptor; bHLH, basic helix-loop-helix; TCDD, 2,3,7,8-tetrachlorodibenzo-p-dioxin; ARNT, AHR nuclear translocator; XRE, xenobiotic-responsive element; GAC63, GRIP1-associated coactivator 63; NR, nuclear receptor; HA, hemagglutinin; GST, glutathione S-transferase; QPCR, quantitative real time PCR; siRNA, small interfering RNA. ![]()
| ACKNOWLEDGMENTS |
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| REFERENCES |
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