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J. Biol. Chem., Vol. 281, Issue 24, 16750-16756, June 16, 2006
A Pool of Extramitochondrial Frataxin That Promotes Cell Survival* 1 1![]() ![]() ![]() 2
From the
Received for publication, November 7, 2005 , and in revised form, March 31, 2006.
Frataxin is a mitochondrial protein involved in iron metabolism. Defective expression of frataxin causes Friedreich ataxia (FA), an inherited degenerative syndrome characterized by ataxia, cardiomyopathy, and high incidence of diabetes. Here we report that frataxin-deficient cells are more prone to undergo stress-induced mitochondrial damage and apoptosis, while the overexpression of frataxin confers protection to a variety of cell types. Moreover, we reveal the existence of an extramitochondrial pool of frataxin, which can efficiently prevent mitochondrial damage and apoptosis in different cellular systems. Remarkably, extramitochondrial frataxin can fully replace mitochondrial frataxin in promoting survival of FA cells.
Friedreich ataxia (FA)3 is the most common inherited ataxia, with an estimated prevalence within the caucasian population of 1:30,000 (1). Age at onset may range from 5 to 25 years, and loss of deambulation ensues 1020 years from the onset. Progressive hypertrophic cardiomyopathy is a frequent cause of premature death. FA is caused by the defective expression of the mitochondrial protein frataxin, due to, in most cases, homozygous GAA triplet repeat expansion within the first intron of the FRDA gene (2).
Frataxin is required for animal development, since its complete loss results in embryonic lethality in the mouse (3) and in developmental arrest in the nematode Caenorhabditis elegans (4). Partial expression of frataxin allows organismal development and survival, yet results in progressive degeneration of specific tissues. In fact, frataxin deficiency in humans critically affects survival of large primary neurons of the dorsal root ganglia, cardiomyocytes, and pancreatic beta cells, accounting for FA syndromic features. Frataxin cooperates to the biogenesis of iron-sulfur clusters (ISC) (5, 6), important cofactors for a number of proteins involved in energy metabolism and respiration, such as aconitases and components of the mitochondrial electron transfer chain (7). Moreover, frataxin may physically interact with mitochondrial aconitase and ETC components (8, 9), directly affecting energy metabolism. Frataxin itself might be involved in iron binding and storage (10), in a homopolymeric form capable of ferroxidase activity (11). Frataxin can also donate iron to ferrochelatase, which catalyzes the insertion of iron into protoporphyrin IX, thus helping in heme synthesis (12). Cells derived from FA patients have a partial defect in ISC-containing proteins, with consequent inefficient mitochondrial respiration (13), lower ATP production, and impaired iron utilization, leading to mitochondrial iron accumulation (14). This may cause higher sensitivity to oxidative stress induced by hydrogen peroxide (15, 16) or by serum withdrawal (17). Accordingly, FA patients experience oxidative stress (18, 19), and animal models of frataxin deficiency show accelerated cell death caused by enhanced oxidative stress (20, 21). In other models, however, iron accumulation and oxidative stress may have little pathogenic role (22). Indeed, although current therapy for patients affected by Friedreich ataxia relies mostly upon the use of antioxidants, considerable controversy exists about the role of oxidative stress in FA pathogenesis (23). Here we show that an extramitochondrial form of mature frataxin autonomously contributes to oxidative stress resistance and overall cell survival.
Reagents and AntibodiesThe following reagents were used: C2-ceramide (Biomol), GD3 ganglioside, staurosporine, and carbonyl cyanide m-chlorophenylhydrazone (Sigma), Hoechst 33342, MitoTracker Red CMXRos, tetramethylrhodamine ethyl ester (TMRE), and dihydroethidium (HE) (Molecular Probes). The antibodies used were as follows: anti-frataxin clone 1G2 (Immunological Sciences), anti-voltage-dependent anion channel (VDAC) (Calbiochem), anti-Hsp60 clone LK-1 and anti-manganese-superoxide dismutase (StressGen), anti-cytochrome c clones 6H2.B4 and 7H8.2C12 (PharMingen), anti- -tubulin (Sigma), and anti-p110 mitochondrial protein clone 2G2 (Kamiya Biomedical). cDNA Expression ConstructsHuman frataxin cDNA containing EcoRI site at 5'-end/BamHI at 3'-end was obtained by PCR from the plasmid pTLX1 (ATCC) and inserted in pIRES2-EGFP (Clontech) bicistronic expression vector. Frataxin cDNA was furthermore cloned into HindIII and BamHI sites of the expression pcDNA3 vector (Invitrogen). The extramitochondrial frataxin56210 construct was synthesized by PCR using the primers 5'-CTAGGAATTCATGTCGAACCAACGTGGCCTCAAC-3' (EcoRI) and 5'-AGTTGGATCCGCATCAAGCATCTTTTCCGG-3' (BamHI), to remove the first 55 amino acids from frataxin precursor, and inserted in pcDNA3 or pIRES2-EGFP vectors. pIRES2/Bcl-2 was generously provided from P. Bonini (University of Florence, Florence, Italy). Human 3-hydroxyisobutyrate dehydrogenase cDNA MGC-40361 was obtained from ATCC and subcloned in pIRES2-EGFP.
Cell Culture and TransfectionsGM15850B lymphocytes, from a clinically affected Friedreich ataxia patient, homozygous for the GAA expansion in the FRDA gene with alleles containing
Apoptosis, Mitochondrial Depolarization, and Reactive Oxygen Species (ROS) ProductionApoptotic FA and healthy lymphoblasts were detected after staining with annexin V-PE (PharMingen) following the supplier's instructions; mitochondrial inner membrane depolarization was detected after incubation of treated cells with 50 nM TMRE for 20 min at 37 °C, whereas ROS production was quantitated by incubation with 4 µM HE for 20 min at 37 °C. Apoptosis of transiently transfected cells was determined by counting Hoechst 33342-stained fragmented nuclei among GFP-positive cells. Blind counting by two investigators, of at least 300 cells, was performed for each group. ROS production in transfected SH-SY5Y cells was determined as described above, by dual color flow cytometry, analyzing red fluorescence among electronically gated green fluorescent cells. Analysis of Cytochrome c ReleaseLymphoblasts from FA-affected and healthy individuals were treated with 0.4 µM staurosporine, harvested after 46 h, and resuspended in 100 µl digitonin (50 µg/ml in phosphate-buffered saline (PBS) with 100 mM KCl) for 5 min on ice. Cells were fixed in 4% paraformaldehyde for 20 min at room temperature, washed three times in PBS, and incubated in blocking buffer (3% BSA, 0,05% saponin in PBS) for 1 h. After incubation overnight at 4 °C with anti-cytochrome c or anti-Hsp60 1:200 in blocking buffer, cells were washed three times and incubated for 1 h at room temperature with PE-labeled secondary anti-mouse antibody (PharMingen), diluted 1:200 in blocking buffer. Quantitative analysis was performed by flow cytometry.
Confocal Microscopy AnalysisHeLa cells were plated onto glass chamber slides (Lab-Tek) and grown in complete medium for an additional day after plating. Viable cultures were either first exposed for 20 min at 37°C to 100 nM MitoTracker Red CMX diluted in control medium or directly fixed for 15 min with 4% paraformaldehyde in PBS. Coverslips were rinsed once with PBS and permeabilized for 30 min at 37 °C with 60 µM digitonin, followed by a blocking step, with PBS containing 10% FBS, overnight at 4 °C. Samples were then incubated for 1 h at 37 °C with 1:100 dilution of anti-frataxin mAb, anti-p110 mitochondrial protein mAb or anti-Hsp60 mAb, followed by secondary BODIPY-conjugated goat anti-mouse antibody (Molecular Probes), washed, and mounted on glass slides with Prolong Antifade (Molecular Probes). Confocal images were acquired by using a PCM-2000 confocal microscope (Nikon) and were then processed by using EZ C1 software (Nikon).
Subcellular FractionationsTo isolate mitochondrial and cytosolic fractions, cells were harvested, washed twice with ice-cold PBS, and resuspendend into an ice-cold isotonic buffer (210 mM mannitol, 70 mM sucrose, 10 mM HEPES, pH 7.4, 1 mM EDTA, and 1 mM dithiothreitol) supplemented with protease inhibitors (1 mM phenylmethylsulfonyl fluoride, 1 µg/ml leupeptin, 1 µg/ml pepstatin A, 1 µg/ml aprotinin). Human peripheral blood mononuclear cells from different healthy donors were isolated by lymphoprep density gradient centrifugation at 800 x g and treated as above. Cells were then passed through a 30-gauge syringe needle several times. The cell suspension was centrifuged at 700 x g for 10 min at 4 °C to eliminate nuclei and unbroken cells. The supernatant was further centrifuged twice at 10,000 x g for 30 min at 4 °C and collected as a cytosolic fraction. The heavy membrane pellet, which contained mitochondria, was washed in the isotonic buffer and resuspended in a hypotonic buffer (PBS containing 1% Triton X-100) supplemented with protease inhibitors. To partition the cytosolic fractions into P100 and S100 fractions, further centrifugations were performed at 100,000 x g for 1 h at 4°C. For total protein extracts, cells were lysed in ice-cold lysis buffer (50 mM Tris-HCl, pH 7.5, 150 mM NaCl, 1% Triton X-100, 1% Nonidet P-40, 5 mM EDTA, 5 mM EGTA) supplemented with protease inhibitors. Total, mitochondrial, and cytosolic fractions were then analyzed by Western blotting and revealed by ECL (Amersham Biosciences).
To investigate the role of frataxin in promoting cell survival, we took advantage of lymphoblastoid cells derived from a FA patient, which express very low levels of frataxin, and control lymphoblastoid cells derived from a healthy brother of the patient (Fig. 1A). Lymphoblasts were exposed to death-inducing doses of ceramide, as a general and conserved mediator of cellular stress responses (24, 25), to ganglioside GD3, which specifically targets mitochondria and promotes apoptosis (26, 27), to the kinase inhibitor staurosporine and to UVB. Fig. 1B shows that FA lymphoblasts were more sensitive to ceramide, to GD3, and to staurosporine, as measured by apoptosis induction, than their related controls. However, frataxin deficiency did not affect their sensitivity to UVB (over a wide range of doses; data not shown). A similar spectrum of sensitivity was observed when mitochondrial inner membrane depolarization (Fig. 1C) and production of ROS (Fig. 1D) were measured. Importantly, FA lymphoblasts released cytochrome c from mitochondria more readily that their healthy controls, when exposed to staurosporine (Fig. 2). Collectively, these results indicate that frataxin-deficient cells are more sensitive to several, yet not all, major inducers of cellular stress. We then directly addressed the ability of frataxin to suppress apoptosis by overexpressing frataxin in different cell lines. Frataxin is normally synthesized as a 210-amino acid precursor. Subsequently, N-terminal mitochondrial localization sequences allow the import of the precursor into the mitochondria, where a mitochondrial processing peptidase (MPP) sequentially cleaves the precursor after Gly41 and Ala55 releasing an intermediate product, and eventually the 155-amino acid mature, functional mitochondrial frataxin (28, 29) (Fig. 3A). To verify whether the mitochondrial localization is obligatory for its function, we generated a frataxin deletion mutant, extramitochondrial frataxin56210, lacking the first 55 residues, including the N-terminal mitochondrial import sequences. This mutant therefore corresponds to the mature frataxin and cannot be recruited into the mitochondria. Although this mutant was produced according to the reported MPP cleavage site (RA55:S) yielding the mature product (28), when transiently expressed in several cell lines it migrated slightly slower than mature frataxin proteolytically generated from the wild type construct (Fig. 3B). The latter corresponds to the genuine mature product, since it co-migrated with the endogenous frataxin present in each cell line. To verify the compartmentalization of the frataxin products, the wild type and the extramitochondrial frataxin56210 were transiently expressed in HEK-293 cells, and cell fractionations were performed. SDS-PAGE and Western analysis of the fractionated cell lysates confirmed that the cytosolic protein tubulin partitioned within the cytosolic fractions and that the mitochondrial VDAC and cytochrome c associated with the mitochondrial fractions. As expected, the extramitochondrial frataxin56210 generated a product that did not associate with the mitochondria (Fig. 3C). Unexpectedly, however, the mature product from wild type frataxin was not only found associated with the mitochondria but was also found in the cytosolic fraction (Fig. 3C).
The T-cell lymphoma HuT78 cells undergo massive apoptosis when exposed to ceramide. We found that the transient expression of frataxin protects HuT78 cells toward ceramide-induced apoptosis, to the extent achieved by the transient expression of the anti-apoptotic protein Bcl-2 (Fig. 4A). The overexpression of a different mitochondrial protein, 3-hydroxyisobutyrate dehydrogenase, was ineffective. HuT78 cells also undergo apoptosis in response to endogenous GD3 accumulation, as induced by the transient expression of GD3 synthase (ST8). The simultaneous co-expression of frataxin prevented ST8-induced apoptosis, similarly to the protection conferred by Bcl-2 co-expression (Fig. 4B). These findings were extended to additional cellular systems, such as the lymphoid cell line Jurkat and the neuroblastoma cell line SH-SY5Y. In both cases the transient expression of frataxin significantly suppressed ceramide-induced apoptosis (Fig. 4C). Both in Jurkat and in SH-SY5Y cells, however, frataxin could not block UVB-induced apoptosis.
Quite unexpectedly, in all instances the expression of the extramitochondrial frataxin56210 was at least as effective in apoptosis protection as the expression of wild type frataxin (Fig. 4, AC). Moreover, as detected by hydroethidine staining and FACS analysis, extramitochondrial frataxin56210 transiently expressed in SH-SY5Y neuroblastoma cells suppressed ceramide-induced ROS production as efficiently as wild type frataxin (Fig. 4D). Together these results suggest that mature frataxin may not be only confined to the mitochondria and that an extramitochondrial pool of frataxin can control ROS production and apoptosis. To exclude that the presence of mature frataxin outside the mitochondria observed in HEK-293 cells (Fig. 3C) was due to forced expression, we investigated the distribution of endogenous frataxin by immunostaining and confocal microscopic analysis in HeLa cells. Fig. 5 shows that a substantial amount of frataxin does not co-localize with the mitochondria, as revealed by simultaneous MitoTracker staining, while complete co-localization can be detected between mitochondria and the p110 mitochondrial protein or the mitochondrial matrix protein HSP60.
To verify that the non-mitochondrial endogenous frataxin corresponded to the endogenous
To further analyze the functional capability of extramitochondrial frataxin, both wild type and extramitochondrial frataxin56210 were stably expressed into the frataxin-deficient FA lymphoblasts (Fig. 7A). Stable transfectants were then exposed to ceramide and staurosporine. As shown in Fig. 7, the expression of the extramitochondrial frataxin56210 was at least as effective as the expression of the wild type frataxin in granting protection to ceramide, measured by triggering of apoptosis (Fig. 7B), induction of mitochondrial inner membrane depolarization (Fig. 7C), and production of ROS (Fig. 7D). Similarly, protection was conferred by extramitochondrial frataxin56210 to FA cells in response to staurosporine (Fig. 7, BD). Therefore, extramitochondrial frataxin can functionally substitute for mitochondrial frataxin in promoting cell survival.
Here we show that a significant pool of mature frataxin not associated with the mitochondria exists in different cell types. Extramitochondrial frataxin is functional, as its expression can prevent stress-induced ROS accumulation and apoptosis in transformed cells. Moreover, it can fully replace mitochondrial frataxin in restraining stress-induced mitochondrial damage and apoptosis induction in FA cells. We found that frataxin deficiency sensitizes cells to stress-induced apoptosis and that, perhaps more importantly, the enhanced expression of frataxin suppresses stress-induced apoptosis in different cellular systems. In particular, frataxin appears to efficiently suppress mitochondria-mediated apoptosis induced by staurosporine and by ceramide or GD3 ganglioside. These two structurally related lipid mediators of cellular stress, upon intracellular accumulation, cause mitochondrial membrane damage associated with ROS production and release of apoptogenic factors such as cytochrome c and apoptosis-inducing factor and activated caspase 9 (26, 27). Surprisingly, mitochondrial damage and apoptosis appear efficiently protected also by an extramitochondrial pool of mature frataxin.
Proteolytic processing by MPP is required for the production of a mature and functional frataxin (28). Although not directly addressed by the present work, it seems likely that extramitochondrial frataxin is exported from the mitochondria in its mature form, after processing by the MPP. Frataxin may therefore behave similarly to other nuclear-encoded proteins, which enter the mitochondria for maturation and are later exported (30), although the mechanisms of export and targeting to extramitochondrial location are still largely obscure. An extramitochondrial re-localization of frataxin has been very recently described during the enterocyte-like differentiation of the human colon adenocarcinoma cell line Caco-2 (31). In this system, extramitocondrial frataxin was found to associate with IscU1, a component of the ISC assembly machinery. Frataxin is in fact involved in the biosynthesis of ISC, inorganic prosthetic groups contained in a variety of proteins (7). In mammalian cells, frataxin deficiency affects both mitochondrial and cytosolic ISC-containing proteins (6, 8, 32). ISC biogenesis in eukaryotes occurs mainly within the mitochondria and provides metalloclusters to many of the components of the mitochondrial respiratory chain and to both mitochondrial and cytosolic aconitases (33). The assembly of cytosolic ISC-containing proteins requires export of ISCs from mitochondria. Whether frataxin is exported together with ISCs via this pathway and whether extramitochondrial frataxin participates to ISC biogenesis remains to be further investigated. Frataxin is required for cell survival and organismal development. Homozygous inactivation of the frda gene in the developing mouse results in embryonic lethality, with tissues showing both apoptotic and necrotic features (3). Myocardium and several areas of the central nervous system from conditional knock-out mice also show signs of degeneration caused by massive cell death (34), including autophagy (35). Interestingly, we recently reported that in the nematode C. elegans, the frataxin (frh-1) knock-out strain is developmentally arrested at the L2-L3 stage, and RNA interference-mediated suppression of frh-1 expression results in higher sensitivity to superoxide-induced stress (4, 36). Accordingly, cellular antioxidant defenses are modulated by frataxin expression levels (37, 38). Cells derived from FA patients are indeed more susceptible to oxidative stress and can be protected by reconstitution of frataxin (16). FA patients indeed show biochemical signs of ongoing oxidative stress (18, 19). Impaired mitochondrial respiration, due to loss of ISC-containing proteins, is considered responsible for increased ROS production and increased sensitivity to stress, leading to accelerated cell death (39). This scenario, however, has been recently challenged by the finding that, in the cardiac conditional knock-out mouse model, ISC biogenesis is reduced in the absence of oxidative stress, and antioxidant interventions have no effect on tissue degeneration (22). The molecular mechanism used by extramitochondrial frataxin to suppress apoptosis is currently under investigation. We observed that extramitochondrial frataxin efficiently prevents stress-induced ROS accumulation. The finding that extramitochondrial frataxin can efficiently substitute for mitochondrial frataxin in preventing oxidative damage and suppressing apoptosis may provide an opportunity to identify and pharmacologically modulate cytosolic targets relevant to the disease.
* This work was supported by the Associazione Italiana Ricerca sul Cancro and by the European Commission, Projects "CELLAGE" and "TRANSDEATH." The costs of publication of this article were defrayed in part by the payment of page charges. This article must therefore be hereby marked "advertisement" in accordance with 18 U.S.C. Section 1734 solely to indicate this fact.
1 These authors contributed equally to this work. 2 To whom correspondence should be addressed. E-mail: roberto.testi{at}uniroma2.it.
3 The abbreviations used are: FA, Friedreich ataxia; ISC, iron-sulfur clusters; GD3, II3(NeuAc)2-LacCer; TMRE, tetramethylrhodamine ethyl ester; HE, dihydroethidium; GFP, green fluorescent protein; EGFP, enhanced GFP; FBS, fetal bovine serum; ROS, reactive oxygen species; PBS, phosphate-buffered saline; mAb, monoclonal antibody; MPP, mitochondrial processing peptidase; VDAC, voltage-dependent anion channel; FACS, fluorescence-activated cell sorter.
We thank Dario Serio for technical assistance.
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