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J. Biol. Chem., Vol. 281, Issue 29, 20190-20196, July 21, 2006
Staphylococcus aureus Protein A Activates TNFR1 Signaling through Conserved IgG Binding Domains* 1![]() ![]() ![]() 2
From the
Received for publication, March 1, 2006 , and in revised form, April 13, 2006.
Staphylococcus aureus continues to be a major cause of infection in normal as well as immunocompromised hosts, and the increasing prevalence of highly virulent community-acquired methicillin-resistant strains is a public health concern. A highly expressed surface component of S. aureus, protein A (SpA), contributes to its success as a pathogen by both activating inflammation and by interfering with immune clearance. SpA is known to bind to IgG Fc, which impedes phagocytosis. SpA is also a potent activator of tumor necrosis factor (TNF- ) receptor 1 (TNFR1) signaling, inducing both chemokine expression and TNF-converting enzyme-dependent soluble TNFR1 (sTNFR1) shedding, which has anti-inflammatory consequences, particularly in the lung. Using a collection of glutathione S-transferase fusions to the intact IgG binding region of SpA and to each of the individual binding domains, we found that the SpA IgG binding domains also mediate binding to human airway cells. TNFR1-dependent CXCL8 production could be elicited by any one of the individual SpA IgG binding domains as efficiently as by either the entire SpA or the intact IgG binding region. SpA induction of sTNFR1 shedding required the entire IgG binding region and tolerated fewer substitutions in residues known to interact with IgG. Each of the repeated domains of the IgG binding domain can affect multiple immune responses independently, activating inflammation through TNFR1 and thwarting opsonization by trapping IgG Fc domains, while the intact IgG binding region can limit further signaling through sTNFR1 shedding.
Staphylococcus aureus is a common human pathogen associated with diverse types of infection, ranging from trivial pustules to overwhelming toxic shock and death (1). Much of its success as a pathogen can be attributed to the expression of surface proteins that enable the organism to bind efficiently to many host tissues (2). However, in contrast to other potential pathogens, staphylococci also have evolved numerous mechanisms to evade the immune responses that they evoke (3). The initial colonization of host tissues is mediated by the many proteins that promote adherence to extracellular matrix materials such as fibrinogen (clumping factors A and B, ClfA and ClfB), fibronectin (fibronectin-binding proteins, FnBPs), collagen (collagen-binding protein, Cna), and elastin (elastin-binding protein, EbpS) (47). These are not simply inert adhesins but often activate host responses. For example, FnBPs stimulate internalization of bacteria into epithelial and endothelial cells via a fibronectin bridge to the 5 1 integrin (8, 9). Along with ClfA the FnBPs also activate platelets (10, 11), likely to be important in endovascular infections such as endocarditis. Although many staphylococcal surface components are proinflammatory, activating chemokine expression and evoking the influx of leukocytes and especially phagocytic cells, the organism also has mechanisms to avoid phagocytic clearance. Protein A (SpA) expression has an important anti-phagocytic effect through its interactions with the Fc component of immunoglobulin. Although the interactions between SpA and human immunoglobulin chains have long been recognized, there is only recently a growing appreciation for the central importance of SpA in the pathogenesis of S. aureus infection.
SpA is a 42-kDa protein covalently anchored in the staphylococcal cell wall through its carboxyl terminal end. The protein is comprised of five repeated domains (E, D, A, B, C) of Both the SpA-Fc and SpA-Fab interactions have been analyzed at the molecular level with co-crystallized complexes (2123). The SpA domains adopt three-helix bundles (2325). One face comprising residues from helices I and II binds IgG Fc, whereas residues from helices II and III on the other face bind IgM. The residues from helix II that bind Fc are different from those that bind Fab, with the exception of a single glutamine (Gln-32 in SpA domain D) (21, 23).
SpA can also act directly as an immune effector itself through its ability to bind and activate tumor necrosis factor
Bacterial Strains and Growth ConditionsDNA cloning was performed in Escherichia coli XL1-Blue (Qiagen). E. coli BL21(DE3) (Invitrogen) was used for expression of recombinant proteins. E. coli was routinely grown in Luria Bertani broth at 37 °C with shaking at 200 rpm. Ampicillin (100 µg/ml) was incorporated into the medium where appropriate. DNA ConstructionsThe full-length spa, the five- and single-domain repeats of spa encoding the extracellular immunoglobulin binding domains, and the fragment encoding the carboxyl-terminal region of SpA (Fig. 1) were cloned into plasmid pGEX-KG. Oligonucleotides were designed to allow amplification of each individual SpA repeated domain (Table 1). Cross-reaction of primers due to high sequence homology of the repeats was prevented by digestion of the spa template with unique restriction endonucleases prior to single-domain amplifications.
Expression and Purification of Recombinant ProteinsFor expression of recombinant SpA truncates, pGEX-KG constructs were purified from E. coli XL1-Blue and transformed into E. coli BL21. Overnight cultures were inoculated into fresh medium and grown to an A600 of 0.5. Isopropyl -D-thiogalactopyranoside was added to a concentration of 1 mM, and the culture was grown for a further 4 h. Cells were harvested by centrifugation at 7,000 rpm for 10 min in a Sorvall GS-3 rotor. The pellet was resuspended in phosphate-buffered saline (PBS) containing protease inhibitor (Roche Applied Science), lysozyme (200 µg/ml), and DNase I (3 µg/ml). Cells were lysed by repeated freeze/thaw cycles. Cell debris was removed by centrifugation. Recombinant proteins expressed from pGEX-KG contained an amino-terminal GST fusion of 26 kDa. The GST fusion proteins were purified using the MicroSpin GST purification module (Amersham Biosciences) and dialyzed against PBS. Recombinant five- and single-domain GST fusion proteins had approximate molecular masses of 59 and 32 kDa, respectively. Site-directed MutagenesisMutations were introduced into SpA domain D using a PCR-based mutagenesis strategy. Briefly, overlapping oligonucleotides carrying the desired mutation were combined with standard flanking primers to yield two overlapping mutant products. These were combined and amplified using the flanking primers alone to yield the mutant fusion product. In some cases, mutations were introduced using the QuikChange® method according to the manufacturer's instructions (Stratagene). The following amino acid substitutions were constructed: F5A, F13A, Y14A, L17A, N21A, I31A, Q32A, and K35A. Oligonucleotides used to introduce mutations are listed in Table 2. Mutated domains were cloned directionally into pGEX-KG and expressed as described above. Each mutant protein was tested for binding to human IgG Fc domain and to human VH3 IgM. For each mutant that was defective in binding to IgG, normal levels of binding to IgM occurred (data not shown). This shows that the mutant proteins were likely to have taken up the proper conformation.
Cell Lines1HAEo- (human airway epithelial) and 16HBE (human bronchoepithelial) cells (D. Gruenert, California Pacific Medical Center Research Institute, San Francisco, CA) were grown as previously detailed (27, 28). Primary airway epithelial cells isolated from human nasal polyps were grown on Transwell clear filters (Corning Costar) in M3 medium as previously described (29). Protein A Binding to Epithelial CellsCells were fixed with 1% paraformaldehyde for 10 min at 4 °C and then incubated with increasing amounts of full-length SpA or the domain constructs for 1 h. Cells were washed three times and stained with anti-protein A monoclonal antibody (Sigma). Alexa Fluor 488-conjugated secondary antibody (Molecular Probes), was used. An irrelevant isotype-matched antibody was used as a control, and the fluorescence intensity was subtracted from the fluorescence intensity obtained with the SpA-specific antibody. Cells were analyzed with a BD Biosciences FACSCalibur using CellQuest software. For the competition assays the cells were incubated with Alexa 488-labeled SpA and increasing amounts of unlabeled IgG binding domain (GST-E-C), full-length SpA (GST-SpA), or the carboxyl-terminal region of SpA (GST-X). Cells were washed, and fluorescence was determined by flow cytometry. Confocal Microscopy16HBE cells were grown on Transwell-Clear filters (Corning Costar) at an air-liquid interface to form polarized monolayers. Cells were fixed with 4% paraformaldehyde and incubated with SpA or the IgG binding domains (E-C) for 1 h. After washing, rabbit polyclonal anti-TNFR1 antibody (Santa Cruz) and mouse monoclonal anti-protein A antibody were added for 1 h. Alexa Fluor 594-conjugated rabbit secondary antibody (Molecular Probes) and Alexa Fluor 488-conjugated mouse secondary antibody (Molecular Probes) were then added for 1 h. After washing, filters were removed from transwells and mounted with Vectashield (Vector Laboratories Inc.) onto glass slides. CXCL8 and sTNFR1 Detection1HAEo- cells, weaned from serum for 24 h, were exposed to the GST fusion proteins (2.5 µM) for 4 h. CXCL8 in the supernatant was measured by enzyme-linked immunosorbent assay (ELISA) (BD Biosciences). Soluble TNFR1 (sTNFR1) in the supernatants was detected by using DuoSet ELISA for human sTNFR1 (R&D Systems).
Mouse StudiesC57BL/6 mice or C57BL/6-Tnfrsf1atm1Imx (TNFR1 null; Jackson Laboratories) (710 days old) were intranasally inoculated with 10 µl of S. aureus (108 CFU), full-length SpA (GST-SpA, 50 µM), the IgG binding domains (GST-E-C, 50 µM), SpA domain D (GST-D, 50 µM), SpA domain D with Ile-31 replaced by alanine (GST-I31A, 50 µM), SpA domain D with Leu-17 replaced by alanine (GST-L17A, 50 µM), or PBS (control). For neutrophil detection in the lungs, cell suspensions were obtained from lung homogenates and red cells were lysed. Remaining cells were suspended in PBS containing 10% normal mouse serum and incubated for 30 min at 37 °C. Cells were then double stained with phycoerythrin-labeled anti-CD45 and fluorescein isothiocyanate-labeled anti-Ly6G (BD Biosciences). Negative control samples were incubated with irrelevant, isotype-matched antibodies. Cells were gated based on their forward scatter/side scatter profile and analyzed for the double expression of CD45 and Ly6G. For KC mRNA quantification, mouse lungs were obtained at 1618 h post inoculation and stored in RNAlater (Qiagen). RNA was isolated using the Qiagen RNeasy mini kit. cDNA was made from 1 µg of RNA using the iScript synthesis kit (Bio-Rad). For quantitative real-time PCR, amplification was done in a Light Cycler using the DNA Master SYBR Green I kit (Roche Applied Science). Primers used for KC amplification were 5'-CCGCGCCTATCGCCAATGAGCTGCGC-3' and 5'-CTTGGGGACACCTTTTAGCATCTTTTGG-3', and 35 cycles were run with denaturation at 95 °C for 8 s, amplification at 56 °C for 10 s, and extension at 72 °C for 12 s. Actin was amplified on each individual sample and used as control for standardization. Primers used for actin amplification were 5'-GTGGGGCGCCCCAGGCACCA-3' and 5'-CGGTTGGCCTTGGGGTTCAGGGGGG-3', and 35 cycles were run with denaturation at 95 °C for 8 s, amplification at 63 °C for 10 s, and extension at 72 °C for 12 s. Soluble TNFR1 was assessed in bronchoalveolar lavage from adult mice intranasally inoculated with SpA domain D (GST-D, 50 µM), SpA domain D with Leu-17 replaced by alanine (GST-L17A, 50 µM), SpA domain D with F5A replaced by alanine (GST-F5A, 50 µM), or PBS (control). Bronchoalveolar lavage was performed by instilling 1.5 ml of PBS into the lungs. The fluid recovered (
The SpA IgG Binding Region Mediates the Biological Activity of SpA Binding to Human Airway CellsWe postulated that multiple copies of the IgG binding region of SpA are highly conserved in clinical isolates of S. aureus because of their ability to recognize multiple eukaryotic receptors that are important in pathogenesis. To test this hypothesis, we compared the properties of intact SpA isolated as a GST fusion protein (GST-SpA), the complete IgG binding region (SpA GST-E-C), individual IgG binding domains (GST-E, GST-D, GST-A, etc.), and the carboxyl-terminal X domain (Fig. 1). The intact SpA and the E-C domain displayed similar binding kinetics to 1HAEo- cells (Fig. 2A). Increasing amounts of the E-C fragment effectively competed with intact SpA for binding to airway cells (Fig. 2B). The carboxyl-terminal X region neither binds to the human cells (Fig. 2A) nor significantly competes with SpA for binding (Fig. 2B). The interaction between the IgG binding region of SpA and TNFR1 on the surface of polarized airway cells was visualized by confocal imaging (Fig. 2C). Both the intact SpA and the E-C fragment co-localized with TNFR1 along the apical surface of the polarized airway cells. SpA-TNFR1 co-localization was confirmed using primary airway epithelial cells (Fig. 2D). Each of the individual IgG binding domains was capable of binding to airway cells but with less affinity than the entire E-C domain, because 510-fold more protein was required to achieve saturation (Fig. 2E). The binding of the isolated domains E and A was not saturable in contrast to that of the other IgG binding domains (D, B, and C).
SpA IgG Binding Domains Are Sufficient to Activate CXCL8 ProductionIn response to ligation of TNFR1 by SpA a proinflammatory signaling cascade is activated (26). To determine whether the IgG binding domains of SpA are sufficient to mediate this response, we incubated intact SpA, the complete IgG binding domain (GST-E-C), or each individual IgG binding domain (GST-A, GST-B, GST-C, etc.) with 1HAEo- (Fig. 3, A and B) or primary (Fig. 3C) airway epithelial cells and monitored CXCL8 production. The entire E-C domain as well as each of the individual IgG binding domains was comparable with the intact SpA in activating CXCL8 expression. Neither the COOH-terminal X domain nor the GST tag had immunostimulatory activity.
SpA IgG Binding Domains Activate sTNFR1 SheddingSpA ligation of TNFR1 initiates shedding of the soluble portion of TNFR1 from the surface of airway cells by activating the TNF- -converting enzyme (TACE or ADAM 17) (26). We compared the ability of intact SpA, the IgG binding domains, and the carboxyl-terminal X region to induce sTNFR1 shedding (Fig. 3D). The IgG binding region E-C was equivalent to the intact SpA in activating sTNFR1 shedding. As with CXCL8 induction, the COOH-terminal X domain was inactive. However, individual IgG domains were substantially less potent than the intact E-C fragment in stimulating sTNFR1 shedding (Fig. 3E), and the isolated A and E domains were less potent that the other individual IgG binding domains. TNFR1 shedding in response to the IgG binding domain D was confirmed in primary airway epithelial cells (Fig. 3F). Thus, two consequences of SpA-TNFR1 binding are differentially activated by the same IgG binding region of SpA, with the TNFR1-CXCL8 pathway apparently less constrained by ligand-receptor affinities than the TNFR1-TACE-dependent cascade.
SpA Amino Acids That Interact with IgG Are Involved in TNFR1 RecognitionHaving established that the SpA IgG binding domains are responsible for the TNFR1 recognition, we then tested whether the same amino acids that mediate SpA binding to the IgG Fc
Alanine substitutions in phenylalanine 13 and tyrosine 14 almost completely abolished binding to airway epithelial cells (Fig. 4B) as well as CXCL8 production (Fig. 4C) and sTNFR1 shedding (Fig. 4D). A second group of mutants (phenylalanine 5, leucine 17, isoleucine 31, and lysine 35) resulted in decreased levels of binding when compared with unmodified domain D (Fig. 4B). Despite the decrease in binding, only the substitution in isoleucine 31 impaired CXCL8 production, whereas shedding of TNFR1 was completely abolished by all the substitutions (Fig. 4C). The replacement of leucine 17 by alanine did not affect CXCL8 induction as compared with the unmodified domain D but totally inhibited sTNFR1 shedding (Fig. 4D). These results indicate that the SpA residues that bind to TNFR1 form a cluster of mainly hydrophobic residues between helices I and II (Fig. 4E). In addition, a substitution in glutamine 32, which is the only amino acid involved in both Fab and Fc recognition by SpA, did not affect binding, CXCL8, or sTNFR1 induction (Fig. 4, BD). Thus, the IgG binding domain in SpA mediates apparently discrete responses mediated through TNFR1, as well as two independent interactions with the Fc and Fab chains of IgG.
SpA Activity in VivoTo verify that the SpA IgG binding domains are functional in vivo, we monitored expression of the murine chemokine KC and polymorphonuclear (PMN) leukocyte recruitment following intranasal inoculation of mice with various SpA constructs (Fig. 5). Stimulation of KC mRNA was significantly increased by the E-C fragment (p <0.05 compared with control mice) (Fig. 5A), the SpA D fragment, and the L17A mutant but not by the I31A mutant (Fig. 5B). The SpA IgG binding domain D did not stimulate KC mRNA in TNFR1 null animals, confirming the requirement for TNFR1 in this pathway (Fig. 5B). Mice inoculated with either intact SpA, the IgG binding domain E-C, or wild-type S. aureus strain Newman all had significant PMN recruitment into their lungs at 18 h post-inoculation (Fig. 5C). As predicted by the in vitro studies, the isolated D fragment, but not the I31A mutant, induced PMN recruitment in wild-type but not TNFR1 null mice (Fig. 5D). We then determined in vivo TNFR1 shedding in response to SpA. Soluble TNFR1 was detected in bronchoalveolar lavage 24 h after intranasal inoculation of SpA D fragment but not in mice inoculated with either the L17A or F5A mutant (Fig. 5E).
SpA is a pluripotent virulence factor capable of several important interactions with host components. In infection of the airways where serum components are lacking, S. aureus potently activates epithelial signaling through TNFR1 activation, induction of chemokine expression, and recruitment of neutrophils, a hallmark of staphylococcal infection (26). The SpA-TNFR1 interaction initially provokes a proinflammatory response eliciting CXCL8 expression immediately after binding. The resulting tissue damage at the site of infection and extravasation of PMNs and serum components provide IgG and complement to promote phagocytosis and clearance of bacteria. However, SpA-IgG interactions act to impede phagocytosis and foster bacterial persistence (3). In addition, SpA ligation of TNFR1 initiates TACE-dependent cleavage of the receptor and release of the soluble form of TNFR1 from the cell surface (26). The induction of TNFR1 shedding has anti-inflammatory consequences as it prevents further signaling through the membrane-bound portion of the receptor and neutralizes free TNF- in the airway, limiting the potential for further TNF-dependent signaling.
By analyzing a series of amino acid substitutions in the SpA D domain, it became apparent that the residues important in the interaction between SpA D and the Fc region of IgG are also involved in binding to and activating TNFR1. SpA residues that are on the opposite face of the protein that are involved in IgM Fab binding are not involved in the interaction with TNFR1. As shown both in vitro and in vivo, the activation of sTNFR1 shedding is eliminated by the F5A and L17A substitutions, changes that have little effect on CXCL8 or KC activation. While phenylalanine 13, tyrosine 14, and isoleucine 31 are the most critical residues for CXCL8 production, the induction of sTNFR1 shedding appears to require either a larger ligand domain or perhaps a higher affinity interaction between SpA and TNFR1 than the induction of CXCL8 involves. TNFR1 shedding involves the stimulation of TACE, which occurs through an anti-inflammatory pathway that is entirely distinct from that involved in the canonical proinflammatory cascade initiated by TNFR1-TRAF2-MAPK/NF-
Epidemiological studies show that SpA is expressed by the majority of S. aureus commensal and clinical isolates (30) and at especially high levels in strains causing pneumonia (31). The prevalence of infection in healthy individuals caused by community-acquired methicillin-resistant S. aureus strains is increasing and is predominant at several major medical centers (32). These strains can cause a severe form of necrotizing pneumonia (33) that might indicate an important role for protein A in pathogenesis. The structural organization of SpA, as well as other staphylococcal surface proteins with tandem arrays of repeated sequences, suggests environmental pressure for the conservation of these genes although they are not essential for the growth of the organism in vitro (34). Their multiplicity ensures that random mutation does not eliminate their function. As there has been great interest in developing therapeutic agents that target the TNF-
* This work was supported in part by grants from the National Institutes of Health (to A. S. P.) and the Health Research Board of Ireland (to T. J. F.). The costs of publication of this article were defrayed in part by the payment of page charges. This article must therefore be hereby marked "advertisement" in accordance with 18 U.S.C. Section 1734 solely to indicate this fact.
1 Supported by a postdoctoral fellowship from the U.S. Cystic Fibrosis Foundation. 2 To whom correspondence should be addressed: Dept. of Pediatrics, Columbia University, 650 W. 168th St., Black Bldg. 4-416, New York, NY 10032. Tel.: 212-305-4193; Fax: 212-342-5728; E-mail: asp7{at}columbia.edu.
3 The abbreviations used are: TNF-
4 M. I. Gomez and A. S. Prince, unpublished data.
Confocal microscopy was done at the Herbert Irving Optical Microscopy facility at Columbia University.
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