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J. Biol. Chem., Vol. 281, Issue 31, 22048-22061, August 4, 2006
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From the Department of Microbiology, Showa University School of Pharmaceutical Sciences, Tokyo 142-8555, Japan
Received for publication, December 8, 2005 , and in revised form, May 22, 2006.
| ABSTRACT |
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| INTRODUCTION |
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The LIM domain, whose designation is derived from the first letter of the founders LIN-11, Isl1, and MEC-3, is one of the modular protein-binding domains found in numerous eukaryotic proteins, consisting of a conserved cysteine/histidine-rich sequence coordinating two zinc ions that organize a double zinc finger structure essential for LIM domain function. As described in the extensive review by Kadrmas et al. (1), 135 LIM-encoding sequences are predicted to exist within as many as 58 genes in the human genome. In comparison, sequences for two other protein-binding domains, SH2 and -3, number 115 and 253, respectively. The LIM sequences are often connected with sequences encoding heterologous domains including the homeodomain, catalytic domains, and cytoskeletal-binding domains or other protein-binding modules, such as SH3, PDZ, and LD motifs. The combinations of LIM domains with a variety of these heterologous domains, characterizing individual families of LIM proteins, are the molecular basis for their roles in processes ranging from gene expression and cell adhesion to signal transduction. Among the LIM families, there are some consisting of LIM domains and other modular protein-binding domains and known to function as scaffolding proteins for cellular signaling.
Hic (hydrogen peroxide-inducible clone)-5 is one such scaffolding LIM protein belonging to the paxillin family, consisting of four LD domains at its N terminus and four LIM domains at its C terminus (2-4). It is primarily located at focal adhesions, serving as a scaffold of integrin signaling through interaction with multiple structural and signaling molecules, such as focal adhesion kinase, PYK2/Cak
, protein-tyrosine phosphatase PEST, vinculin, the Arf-Gap family protein GIT1, Csk, and PKL (4, 5). However, we recently found that Hic-5 shuttles between the nuclear and cytoplasmic compartments and identified the nuclear export signal (NES) overlapping with one of the LD motifs at its N terminus (6). Besides Hic-5, an increasing number of the LIM domain proteins have been shown to shuttle between the two compartments through a NES, and these proteins are expected to have a role in coordinating cellular activities in both compartments (e.g. the cell adhesion status sensed at focal adhesions with gene transcription in the nucleus) (see Ref. 1 and references therein). The NES of Hic-5 is unique in demonstrating oxidant-sensitivity dependent on two particular cysteine residues, which causes the protein to be distributed in the nucleus under oxidative conditions. Thus, another function of Hic-5 has now emerged, that of a molecular scaffold specialized for mediating the redox signaling to the nucleus (6).
In this study, we found that Hic-5 was capable of homo- and hetero-oligomerization, depending on its particular LIM domain, which potentially extends its role as a molecular scaffold quantitatively or qualitatively. Previously, we found that a LIM protein, CRP (cysteine-rich protein), bound Hic-5 (7). As a new partner in the hetero-oligomerization, PINCH (particularly interesting new cysteine and histidine-rich protein), which is another focal adhesion LIM protein that serves as a scaffold coupling integrin signals with those of growth factors (8), was identified here. In addition, the hetero-oligomer that formed between Hic-5 and PINCH was suggested to include integrin-linked kinase (ILK) and implicated in the growth control of cells. Most interestingly, the interaction with Hic-5 directed PINCH and CRP, which are primarily located at actin-based structures in the cytoplasm, to move in and out of the nucleus, dependent on the NES of Hic-5. These findings provided evidence of a protein-protein interaction through the LIM module organizing a mobile unit for proteins with dual functions in the cytoplasm and the nucleus to shuttle between the two compartments.
| MATERIALS AND METHODS |
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Primary embryonic fibroblasts were prepared from pregnant mice on day 15 of gestation as described previously (9) and cultured in Eagle's minimal essential medium supplemented with 10% heat-inactivated fetal bovine serum and 50 µg/ml kanamycin under the same conditions as above. Once confluent, they were passaged at a dilution of 1:8 and used prior to the 10th passage. Leptomycin B was purchased from LC Laboratories (Woburn, MA).
Expression Vectors and TransfectionMammalian expression vectors were all based on pCG-N-BL (HA-tagged) (6) and pcDNA3 (FLAG-tagged) (Invitrogen) and are prefixed with pCG- and FLAG-, respectively. The vectors for HA-tagged wild-type proteins (Hic-5, paxillin, PINCH-1, and ILK) used in this study were pCG-LD1mhic-5(Hic-5) (10), pCG-pax (paxillin) (10), and pCG-PINCH and -ILK generated with a PCR-based method by amplifying the coding sequences using Marathon-ready cDNA of mouse 17-day embryos (BD Biosciences Clontech) as a template and inserting them into the vector. Those for FLAG-tagged versions were FLAG-LD1mhic-5 (Hic-5), FLAG-pax (paxillin) (11), and FLAG-PINCH and -ILK constructed by the same PCR-based method using the pCG-based constructs as templates. FLAG-CRP1, -2, and -3 were created by the PCR-based method with Marathon-ready cDNA of mouse 17-day embryos as a template.
The expression vectors for a set of N-terminal truncated mutants of Hic-5 were as follows (6): pCG-hhic-5 (WT), pCG-delLD1-2hhic-5 (
LD1,2), pCG-delLD3-4hhic-5 (
LD3,4), pCG-delLD3hhic-5 (
LD3), and pCG-hhicLIM (LIM). Those for LIM domain mutants of Hic-5 (6) were pCG-LD1mhic-5 (WT), pCG-LD1mhic/mL1/mL2/mL3 (mLIM1, -2, and -3, respectively), pCG-LD1mhic/delL4 (
LIM4), and pCG-LD1mhic/delL2,3,4 (
LIM2-4). The vector for the NES mutant (HmLD3) of pCG-mhic-5 in which an amino acid in LD3 was substituted to disrupt the NES was described previously (6). For the nuclear targeted Hic-5, the PCR-amplified nuclear localization signal (NLS) from the SV40 large T antigen was inserted into the vectors for the wild type (6). pCG-only LIM4 (only LIM4) was created by inserting the PCR-amplified LIM4 portion from amino acid 397 to 461 of LD1mhic-5 (10) into the vector.
The LIM-truncated mutants of PINCH-1 were expressed from the vectors on the basis of FLAG-PINCH, including cDNA fragments for the respective portions of PICNCH-1 amplified by PCR instead of the full-length version. The amplified fragments were LIM1-2 (amino acids (aa) 2-140), LIM2-4 (aa 81-262), LIM4-5 (aa 203-337), LIM1-3 (aa 1-207), and
LIM5 (aa 2-262).
For a series of FLAG-tagged mutants of ILK, the PCR-amplified DNA fragments were cloned into the vector. The fragments for each mutant encoded amino acid residues as follows:
kinase (aa 1-167),
paxillin-binding subdomain (aa 1-375), and
ANK (aa 167-452). ILK273 was created by cutting out enzymatically residues 274-452 of the full-length ILK from FLAG-ILK. To generate E359K, a point mutation was introduced into FLAG-ILK using the QuikChange site-directed mutagenesis kit (Stratagene, La Jolla, CA) with mutated primers according to the manufacturer's instructions.
Retroviral expression vectors were based on the vector pMXs-IG (12). The coding region containing the FLAG tag at the N terminus was excised from the FLAG-tagged pcDNA3 constructs and inserted into the vector. Infection was carried out as described before (7).
All PCR amplifications were carried out with pfu grade polymerase, and the products were verified by DNA sequencing.
The expression vectors were introduced into cells using the conventional calcium phosphate precipitation method (293FT) or with TransIT-LT1 (PanVera, Madison, WI) in the case of COS-7.
Antibodies, Immunoprecipitation, Western Blotting, and ImmunocytochemistryThe monoclonal and polyclonal anti-HA antibodies (12CA5 and Y-11) and the monoclonal anti-FLAG antibody (M2) were described previously (6). Monoclonal antibodies to Hic-5, paxillin, PINCH, and ILK were purchased from BD Biosciences. The procedures used for immunoprecipitation, Western blotting, and immunocytochemistry were essentially the same as described before (11).
Preparation of Recombinant ProteinThe procedure used to prepare proteins was essentially the same as described previously (13). For full-length Hic-5, the BL21 strain of Escherichia coli transformed with the pET16b vector (Novagen), including the coding sequence of an LD1-null form of mouse hic-5 (2), pET16b-mhic-5, was induced to produce the protein by the addition of 1 mM isopropyl-D-thiogalactopyranoside for 3 h at 30 °C. The cells were lysed, and the insoluble fraction was collected by centrifugation followed by washing. After solubilizing in lysis buffer (25 mM Tris-HCl, pH 7.5, 150 mM NaCl, and 10 mM dithiothreitol) containing 8 M urea, the fraction was affinity-purified with a HisTrap Kit (Amersham Biosciences), and the protein was renatured by successive dialysis against lysis buffer containing 4, 2, 1, and finally 0 M urea for several hours at 4 °C. The renatured condition was compatible with the DNA binding assay (13), and the protein was used for cross-linking analysis.
For expression of GST-Hic-5 LIM domain fusion proteins, GST-LIM1-4 (containing all four LIM domains) and GST-
LIM4 (containing LIM1 to -3 domains), E. coli strain BL21 was transformed with the pGEX-5X-1-based expression vectors described previously (13) and induced with 0.1 mM isopropyl-D-thiogalactopyranoside for 24 h at 25 °C in the presence of 1 mM ZnCl2. Extracts were prepared using BugBuster (Novagen) supplemented with 1 mM ZnCl2 and protease inhibitor mixture (Wako Pure Chemical Industries, Ltd., Osaka, Japan) and used as sources of the fusion proteins. The fusion proteins were immobilized on glutathione-Sepharose 4B (Amersham Biosciences) according to the manufacturer's instructions and used for pull-down assays or eluted from the beads in elution buffer (20 mM GSH, 100 mM Tris, pH 8.0, 120 mM NaCl, 1 mM ZnCl2, and 0.5% Nonidet P-40) and used for cross-linking analyses.
Cross-linking AnalysisThe protein was incubated in the presence or absence of 0.001-0.01% glutaraldehyde in the lysis buffer (full-length) or the elution buffer (GST fusion) for 30 min at 37 °C. The reaction was terminated by adding SDS-PAGE sample buffer and further analyzed by Western blotting.
Gel Filtration ChromatographyCells were solubilized in buffer (0.5% Nonidet P-40, 150 mM NaCl, 50 mM Tris-HCl, pH 6.8, and protease inhibitor mixture (Wako Pure Chemical Industries, Ltd., Osaka, Japan)) and, after centrifugation, fractionated by gel filtration through a HiPrep 16/60 Sephacryl HR (fraction range, 1 x 104 to 4 x 106) (Amersham Biosciences) equilibrated beforehand with loading buffer (50 mM Tris-HCl, pH 7.4, 200 mM NaCl, and 5 mM dithiothreitol). Elution was carried out at 8 ml/h, and samples were collected in 0.33-ml fractions. The collected fractions were analyzed by Western blotting. Molecular weight standards of protein (MW-GF1000; Sigma) were analyzed under the same chromatographic conditions.
Immunoelectron MicroscopyPortions of mouse aorta tissue were incubated for more then 3 days in cold 1.84 M sucrose in 0.1 M phosphate buffer containing 20% polyvinyl pyrrolidone. After being cut into small pieces, they were rapidly frozen in liquid nitrogen at -196 °C. Frozen ultrathin sections (100 nm) were cut with a Lica Ultracut R (Vienna, Austria). The sections were picked up on a Formvar-carbon-coated nickel grid, incubated with 2% gelatin in phosphate-buffered saline containing 10 mM glycin, and allowed to react with 1:500 diluted anti-Hic-5 monoclonal antibody (BD Transduction Laboratories) or anti-vinculin monoclonal antibody (Sigma) overnight. The sections were washed five times with glycine/phosphate-buffered saline containing 0.5% gelatin and then incubated for 2 h with 10-nm colloidal gold-labeled rabbit anti-mouse IgG antibody (EY Laboratories, Inc.). After being washed again, the sections were postfixed in 0.1% glutaraldehyde, stained with 2% uranyl acetate, embedded in polyvinyl socohol, and observed with a Joel JEM-1200 EX II electron microscope (Joel, Tokyo, Japan).
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2 µg of protein) in 500 µl of binding buffer (10 mM Tris, pH 7.4, 150 mM NaCl, 0.5% Nonidet P-40, and 0.1% bovine serum albumin) for 90 min at 4 °C. After a wash with the binding buffer and then with phosphate-buffered saline, bound PINCH and ILK proteins were resolved by SDS-PAGE, blotted on a membrane, and detected with streptavidin-horseradish peroxidase (Amersham Biosciences). Cell Growth and BrdUrd IncorporationThe retrovirally infected cells were seeded at 2 x 104 cells in 35-mm dishes. The total cell number was counted every day with a hematocytometer until 5 days after seeding. Cell viability was assessed by trypan blue staining.
For the incorporation of BrdUrd, the infected cells were serum-starved for 36 h and then stimulated by replacing the medium with fresh medium containing 10% fetal bovine serum and BrdUrd (1 µg/ml). At 16 h after the stimulation, cells were fixed with 70% ethanol for 30 min at room temperature and then processed for immunocytochemistry with a Cell Proliferation Kit (Amersham Biosciences).
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| RESULTS |
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In Vitro and in Vivo Analysis of Self-associationIn further experiments, we investigated the self-association of Hic-5 in vitro. First, to test whether Hic-5 can bind itself directly or not, we carried out cross-linking experiments with affinity-purified recombinant proteins. Full-length (Fig. 3A) and GST-Hic-5 LIM domain fusion proteins (Fig. 3B) produced in E. coli were subjected to cross-linking with glutaraldehyde, and the cross-linked products were analyzed by SDS-PAGE followed by Western blotting or silver staining. As seen in Fig. 3A, along with a monomer of about 50 kDa, multimeric species with the molecular masses expected for the dimer, trimer, tetramer, and higher multimeric forms were detected with an increase in the concentration of glutaraldehyde, suggesting that the Hic-5 protein is capable of homo-oligomerization by itself in vitro. Similarly, consistent with the result of domain mapping (Fig. 2), wild-type LIM domains consisting of LIM1-4 fused with GST (GST-LIM1-4) oligomerized, but not those lacking LIM4 (GST-
LIM4), even at a more than 6-fold higher concentration than the wild type, supporting homo-oligomerization of Hic-5 mediated through LIM4.
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10 nm, the diameter of a gold particle) (Fig. 3D, Hic-5). Similar clusters of gold particles were reported in an immunoelectron microscopy study of Alzheimer
-amyloid that aggregated into oligomers and accumulated in neuronal processes (14). Unlike the case of Hic-5, the particles labeling vinculin, which was colocalized with Hic-5 at focal complexes (15), were also concentrated in some areas within the cells, whereas many of them appeared to be separated from others (Fig. 3D, vinculin). This observation strongly suggested that a significant proportion of Hic-5 also homo-oligomerized under the physiological conditions in cells in vivo. Altogether, the above observations suggested that Hic-5 had the capability to oligomerize, including to homo-oligomerize.
Subcellular Distribution and Self-association of Hic-5 Hic-5 is a focal adhesion protein that is also present on actin stress fibers in the cytoplasm and in the nucleus within cells. The observation of multiple species of Hic-5 protein in cells raised the possibility that the localization to specific sites and oligomerization of the protein were interdependent. However, this was unlikely. The analysis of mutants in our previous study suggested that disruption of LIM2 and LIM3 significantly impaired the localization of Hic-5 at focal adhesions and on actin stress fibers (7). Consistent with this, the LIM domain mutants (mLIM2 and mLIM3) showed a disturbed distribution as rodlike or punctuate structures in the cytoplasm and were not localized to focal adhesions (Fig. 3E). However, these mutants retained the ability to self-associate (Fig. 2B), suggesting that the self-association occurred independently of the localization to the actin-related cytoarchitecture. Likewise, the distribution of Hic-5 to the actin-related structures, including focal adhesions, was independent of self-association, since
LIM4, which was only able to exist as a monomer, displayed a distribution within cells apparently indistinguishable from that of the wild type, including a localization to focal adhesions. The nuclear accumulation of this mutant under oxidative conditions was also observed (6).
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In addition to the interaction of Hic-5 with PINCH, we also found that Hic-5 bound ILK, a binding partner of PINCH. In a cross-immunoprecipitation experiment, Hic-5 and ILK were co-precipitated (Fig. 4B). The result was comparable with that with ILK and paxillin, which were previously shown to interact with each other (16) (Fig. 4B). Because ILK was shown to bind PINCH (8), these three proteins were consequently assumed to interact with each other in three ways to form Hic-5-PINCH, Hic-5-ILK, and PINCH-ILK. The possibility of a trimeric complex was also suggested by sequential immunoprecipitation (data not shown).
Determination of Domains Mediating the Hic-5-PINCH and Hic-5-ILK InteractionsThe domains mediating the Hic-5-PINCH and Hic-5-ILK interactions were determined by utilizing a series of mutants in immunoprecipitation experiments as above. First, for the binding of Hic-5 to PINCH, chimeras of Hic-5 and paxillin were tested. Since paxillin did not interact with PINCH, the chimeric protein whose C-terminal half was from paxillin (Hic/pax) but not the reciprocal chimera (Pax/Hic) lost the ability to interact (data not shown), suggesting the importance of the C-terminal half containing the four LIM domains of Hic-5 for the interaction with PINCH. To assess the contribution of each LIM domain, we disrupted them individually by introducing a point mutation (LIM1-3) or deleted LIM4 and found that these manipulations resulted in decreased binding of Hic-5 to PINCH (Fig. 5A). In particular, deletion of LIM4 of Hic-5 completely precluded the interaction (the interaction between
LIM4 and PINCH was undetectable even with a longer exposure) (Fig. 5A, lane 4H), suggesting a critical role for LIM4 of Hic-5 in the association with PINCH as in the self-association of Hic-5 (Fig. 2). Through a similar experiment, the region of PINCH responsible for the interaction with Hic-5 was determined (Fig. 5B) and is schematically represented. The results pointed out the importance of the C-terminal end containing domain LIM5 of PINCH for its binding to Hic-5.
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Interactions among the Endogenous Proteins and in Vitro Not only the exogenously overexpressed proteins but also the endogenous proteins were found to make complexes. The immunoprecipitation of cell lysate prepared from primary mouse embryonic fibroblasts with the antibody to Hic-5 and ILK demonstrated that Hic-5 interacted with ILK and PINCH (Fig. 7A, IP: Hic-5) and that ILK interacted with Hic-5 and PINCH (Fig. 7A, IP: ILK).
Based on the results in Figs. 4, 5, 6, 7, we concluded that Hic-5, PINCH, and ILK interacted with each other as schematically illustrated in Fig. 7B. It should be pointed out that the domains mediating each interaction were specific to the respective interaction, since Hic-5 bound the central region of ILK, whereas PINCH bound the N-terminal ANK1, making it unlikely that the binding of Hic-5 to ILK was mediated by PINCH. Otherwise, the binding of Hic-5 to ILK would be dependent on ANK1 of ILK, the binding domain for PINCH. Similarly, the interaction between Hic-5 and PINCH was presumably direct. In fact, a pull-down assay in which in vitro translated PINCH and ILK were precipitated with beads immobilizing GST-Hic-5 LIM domain fusion protein (GST-LIM1-4) supported the possibility that the interactions between Hic-5 and ILK and between Hic-5 and PINCH were direct (Fig. 7C).
Roles of ILK and Hic-5 in the Regulation of the Subcellular Distribution of PINCHHic-5, PINCH, and ILK are all described as focal adhesion proteins localized to cell matrix adhesion sites. Previous studies suggested that ILK and PINCH-1 mutually regulated their recruitment to focal adhesions and their stability (19, 20). For the recruitment of PINCH, additional requirements were suggested, which included paxillin or a yet to be defined mechanism involving the C-terminal end of PINCH (20, 21). We here examined the role of Hic-5, together with that of ILK, in the regulation of the subcellular distribution of PINCH. To approach this, we ectopically overexpressed PINCH alone, PINCH in combination with Hic-5 or ILK, or the three together in cells and then visualized them using immunocytochemistry with the antibodies to tags. When expressed alone, PINCH was distributed throughout the cell, including the nucleus, under our experimental conditions (Fig. 8C). In previous studies, several conflicting observations were made on the subcellular distribution of PINCH. For example, Zhang et al. (21) and Xu et al. (20) reported a clear localization of PINCH fused with green fluorescent protein to focal adhesions in C2C12. However, another study reported the cytoplasmic, perinuclear, and nuclear localization of endogenous PINCH in Schwann cells (22), implying an indecisive distribution of PINCH in cells. On the other hand, Hic-5 and ILK were found at focal adhesions and in the cytoplasm (Fig. 8, A and B), consistent with previous studies (3, 23), suggesting that Hic-5 and ILK intrinsically harbored a sequence causing them to be recruited to focal adhesions on their own, whereas PINCH required tethering by others for its distribution to discrete sites in the cell.
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LIM4) and PINCH (PINCH
LIM5) indicated that the interaction between Hic-5 and PINCH was a prerequisite for the shuttling of PINCH (Fig. 9C, H
LIM4/ILK/PINCH and H/ILK/PINCH
LIM5). These observations suggested that, through binding to Hic-5, PINCH was driven in and out of the nucleus in a manner dependent on the Hic-5 NES. ILK was also involved in the regulation somehow (Fig. 9C, H/-/PINCH versus H/IL/PINCH), being localized invariably in the cytoplasm under the experimental conditions irrespective of the co-expression of the partners and LMB treatment (data not shown). Hic-5 except for the NES mutant HmLD3 was accumulated in the nucleus independently of the co-expression of PINCH and ILK in nearly 70-80% of the cells upon LMB treatment as reported in our previous study (6). Likewise, we observed that Hic-5 facilitated the shuttling of CRP proteins, the other partners of Hic-5 in hetero-oligomerization (Fig. 9D) (7). When co-expressed with Hic-5, the accumulation of CRP1 and -2 in the nucleus increased in the cell population, albeit in one-third of the cells at most, in response to LMB, whereas that of CRP3 was minimally affected. From these findings, we proposed a new role for Hic-5 as an organizer of the nuclear-cytoplasmic shuttling of the LIM protein complex based on the hetero-oligomerization of Hic-5 with partners that were primarily immobile by themselves, such as PINCH and CRP1 and -2.
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LIM4) and PINCH (PINCH
LIM5) that were unable to interact with each other, thereby breaking down the communication of the signaling molecules between the platforms. In the experiment that followed, the above mutants were introduced into NIH3T3 cells by a retrovirus-mediated method, and cell growth was assessed by measuring doubling time and the incorporation of BrdUrd. Upon the introduction of either mutant, cell growth was suppressed. When the cells were infected with a retroviral construct encoding the PINCH binding-defective Hic-5 (H
LIM4)or its nuclear localizing version (NLSH
LIM4), the doubling time was extended about 1.7-fold, and BrdUrd incorporation was reduced to at most 60% compared with the controls infected with the empty vector or wild-type Hic-5 construct (Fig. 10, A and B). The expression level of the introduced protein was comparable between the wild type (Hic-5) and the mutant (H
LIM4), whereas that of the nucleus-localizing version of the mutant (NLSH
LIM4) was lower (Fig. 10C). Nevertheless, NLSH
LIM4 displayed a more effective suppression of cell growth, suggesting that the action of the complex occurred in the nucleus. Similarly, the Hic-5 binding-defective mutant of PINCH (PINCH
LIM5) expressed at almost equivalent levels to the wild type significantly reduced the population doubling time and BrdUrd incorporation, compared with the wild type (Fig. 10, D-F). | DISCUSSION |
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In this study, we examined the oligomerizing ability of Hic-5 and attributed it to the most C-terminal LIM domain, LIM4. Previously, we have assigned to the individual LIM domains of Hic-5 distinctive roles, as an interface interacting with signaling molecules or as a determinant directing the localization of the protein to actin-related structures in cells (7, 25), and found that LIM4 is uniquely multifunctional. In addition to serving as an interface for interaction with itself, PINCH and ILK, it is implicated in the scaffold function of Hic-5 in the nucleus to assemble transcriptional complexes (26), in the association of Hic-5 with the nuclear matrix (27), and in the interaction with HSP27 (28), although not in the regulation of the localization to actin-based cytoarchitectures (Fig. 4B). These functions of Hic-5 mediated by LIM4 might be coupled with its homo- and hetero-oligomerization.
Basically, the LIM domain is a protein module with a broad spectrum of binding partners (1). Besides the homologous domain, it binds a number of heterologous domains, including ankyrin, SH3, homeodomain, the proline-rich domain of protein-tyrosine phosphatase PEST, LID of LDB1 protein, and other sequences with no obvious notable features. Intriguingly, no consensus sequence or structural feature seems to be shared by these binding partners. This is similar to the leucine-rich repeat and ankyrin repeats and in contrast to many classical protein-binding domains, such as SH2 and SH3, which display discrete and high affinity for particular binding partners. In addition to this diversity of binding sequences, the LIM domain has another peculiar feature in that a single LIM domain can simultaneously bind several proteins, or tandem LIM domains can synergistically bind a single partner. As noted above, this is the case for the LIM domains of Hic-5. LIM4 of Hic-5 simultaneously binds multiple partners, as mentioned above. In the binding of Hic-5 to PINCH and ILK, synergistic effects among the four LIM domains were also observed (Fig. 5A and 6A). In order to completely understand the molecular features of the LIM domains and to delineate the determinants of their specificity, more extensive structural information is needed.
Regarding function, an increasing number of LIM proteins, except LIM homeodomain proteins that are exclusively nuclear and have established transcriptional roles during development, share an intriguing feature (i.e. a putative role in coordinating the actin-based cytoarchitecture with the nuclear activity on the basis of their shuttling between the cytoplasmic and nuclear compartments as discussed in the review by Kadrmas and Beckerle (1)). In that review, it was proposed that the presence of a LIM domain is a hallmark of proteins that can associate with both the actin cytoskeleton and the transcriptional machinery. Actually, many LIM proteins were initially identified as cytoskeleton-associated proteins, including members of the zyxin, FHL, and CRP families, and then found to communicate between the two compartments to influence gene expression. In many cases, however, the mechanism underlying their shuttling remains unclear. For example, LIM-only proteins, including CRP, do not possess a nuclear localization signal (NLS) or NES. As for PINCH, NLS- and NES-like sequences were found at its C-terminal end (22), although its actual function has not been elucidated. One way these proteins may shuttle between the compartments is to make a complex with a shuttling protein and use it as a vehicle.
Paxillin family members, including Hic-5, established as a molecular scaffold in integrin signaling at focal adhesions, were recently shown to have an NES and shuttle between the two compartments (6, 29). Another body of evidence suggested the involvement of Hic-5 in the nuclear activity like most other shuttling LIM proteins, as mentioned above (6, 26, 30-34). However, the functions characterized so far at each location are apparently independent, so it is unclear at present whether they are interrelated or not, and if they are related, it remains unsolved how they are coordinated. Accordingly, the biological meaning of the shuttling is also unexplained.
In the present study, we demonstrated most importantly that Hic-5 bound PINCH and CRP and organized the nuclear-cytoplasmic shuttling complex that assisted the shuttling of both proteins between the two compartments (Fig. 9, C and D). For CRP to function as a coactivator of transcription, its shuttling to the nucleus from the cytoplasmic actin-related cytoarchitecture is essential (35). Another partner, PINCH, is known to exist at focal adhesions. However, a recent report suggested its nuclear localization (22), although the mechanism regulating the localization and its significance have not been addressed. With regard to biological function, PINCH was suggested to play a role in the regulation of the actin cytoskeleton's organization and integrin functions, such as controlling cell shape and survival (8, 36). In this study, we examined the biological significance of the formation of a shuttling complex between Hic-5 and PINCH and found that the docking of the two scaffolds potentially contributes to the signaling for cell growth (Fig. 10), although neither the mechanism involved nor its relation to the shuttling of the complex is known at this stage. Considering that the C-terminal end of PINCH, which is the region where Hic-5 binds, was suggested to be specifically involved in changes of cell shape and in cell survival (20), it is conceivable that the hetero-oligomerization of PINCH with Hic-5 and the shuttling to the nucleus are also involved in these functions. To understand the biological significance of the shuttling complex organized by Hic-5, more information about the role of individual components together with the regulation of the complex's formation will be required, including information on the nuclear function of PINCH.
In the Hic-5-PINCH complex, ILK was demonstrated to be included (Figs. 4B and 7). ILK is a component of focal adhesions that directly interacts with the cytoplasmic tail of integrin
subunits and plays a crucial role in the linkage between integrin and the actin cytoskeleton, thereby regulating numerous aspects of cellular signaling in association with cell adhesion (37, 38). One of its roles in the complex appeared to be to distribute PINCH to focal adhesions, as reported previously (21). Despite this leading role, however, ILK required the presence of the C-terminal end of PINCH besides its own binding domain to regulate the distribution of PINCH, which was consistent with the regulatory role of the C-terminal end suggested previously (Fig. 8) (20, 21). Hic-5, which binds the C-terminal end, thus likely plays a supportive role, possibly through the promotion and/or stabilization of the PINCH-ILK interaction. In this study, we also found that ILK played an essential role in the regulation of the shuttling of the Hic-5 and PINCH complex (Fig. 9C). Based on its consistent cytoplasmic localization and its primary role in the distribution of PINCH to focal adhesions, ILK probably facilitates the formation of a complex at focal adhesions and, sensing the adhesive state of a cell through the integrin, transmits information to the complex and regulates its formation and/or shuttling under the signaling of the integrin. Further comprehensive study of the Hic-5-directed organization of the shuttling complex would potentially contribute to an understanding of the regulation of cell growth/survival by cell adhesion.
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1 To whom correspondence should be addressed: Dept. of Microbiology, Showa University School of Pharmaceutical Sciences, 1-5-8 Hatanodai, Shinagawa-ku, Tokyo 142-8555, Japan. Tel.: 81-3-3784-8209; Fax: 81-3-3784-6850; E-mail: smotoko{at}pharm.showa-u.ac.jp.
2 The abbreviations used are: SH2, Src homology 2; SH3, Src homology 3; NES, nuclear export signal; ILK, integrin-linked kinase; HA, hemagglutinin; NLS, nuclear localization signal; aa, amino acids; BrdUrd, bromodeoxyuridine; LMB, leptomycin B. ![]()
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