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J. Biol. Chem., Vol. 281, Issue 39, 29297-29308, September 29, 2006
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| ABSTRACT |
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2-adaptin and Nedd4, possibly in conjunction with ubiquitin, to coordinate its assembly and release. In search of interaction partners of the viral L envelope protein, we previously discovered
2-adaptin, a putative endosomal sorting and trafficking adaptor of the adaptor protein complex family. We now demonstrate that the viral core interacts with the same
2-adaptor and that disruption of the HBV/
2-adaptin interactions inhibits virus production. Mutational analyses revealed a hitherto unknown ubiquitin-binding activity of
2-adaptin, specified by a ubiquitin-interacting motif, which contributes to its interaction with core. For core, the lysine residue at position 96, a potential target for ubiquitination, was identified to be essential for both
2-adaptin-recognition and virus production. The participation of the cellular ubiquitin system in HBV assembly was further suggested by our finding that core interacts with the endosomal ubiquitin ligase Nedd4, partly via its late domain-like PPAY sequence. Overexpression of a catalytically inactive Nedd4 mutant diminished HBV egress, indicating that protein ubiquitination is functionally involved in virus production. Additional evidence for a link of HBV assembly to the endosomal machinery was provided by immunolabeling studies that demonstrated colocalization of core and L with
2-adaptin in compartments positive for the late endosomal marker CD63. Together, these data indicate that an enveloped DNA virus exploits a new ubiquitin receptor together with endosomal pathway functions for egress from hepatocytes. | INTRODUCTION |
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By contrast, assembly and budding mechanisms in families of enveloped DNA viruses, like the hepadnavirus family, are still poorly understood. The hepatitis B virus (HBV) is the prototype member of this virus family, comprising small enveloped DNA viruses that replicate via reverse transcription and supposedly bud at intracellular membranes (14, 15). Similar to retroviruses, hepadnavirus assembly begins with the formation of icosahedral nucleocapsids that package the viral pregenomic RNA together with the viral polymerase. Inside the capsids, formed by 120 dimers of the single 21-kDa core protein, the partially double-stranded 3.2-kb DNA genome is synthesized through reverse transcription of the pregenomic RNA (16). Mature nucleocapsids, formed in the cytoplasm, can then be enclosed by the viral envelope composed of cellular lipids and three viral glycoproteins, the small S, middle M, and large L envelope proteins. The envelope proteins originate at the endoplasmic reticulum (ER) membrane and share the transmembrane region of S. The M and L proteins differ from S by their N-terminal extensions, termed preS, which contribute to their functional differences. Virus assembly strictly depends on the L protein, whereas the S protein is required but not sufficient, and the M protein is dispensable (15).
In contrast to retroviruses, HBV budding and egress are dependent on both envelope and core structural proteins. Genetic approaches led to the identification of two short envelope regions within L and S that are essential for virus formation (17, 18), possibly by providing scaffolding function for the interaction with the nucleocapsid. For core, mutational analyses have mapped eleven single amino acids that cluster at the capsid surface and are required for nucleocapsid envelopment (19). It has been unclear, however, whether a direct envelope-core interaction initiates and drives the assembly process. Similarly, the cellular membrane compartments used during HBV budding remain largely undefined. Because solitary expression of the S protein leads to the assembly of empty subviral particles that bud at post-ER/pre-medial-Golgi membranes and leave the cell via the constitutive secretory pathway, it is hypothesized that viral particles may take the same export route (14).
Despite the previously reported investigation of the role of chaperones (20, 21), little is known about the general network of host proteins needed for HBV morphogenesis. One candidate molecule involved in viral trafficking and budding may be
2-adaptin that we discovered as an L-specific interaction partner in a yeast two-hybrid screen using the assembly-promoting region of L as bait (22). Adaptins are subunits of adaptor protein complexes involved in the sorting of cargo proteins to specific membrane compartments within the cell. Four heterotetrameric adaptor protein (AP) complexes have been described in mammalian cells, designated AP-1 through AP-4. They concentrate the appropriate cargo into the nascent vesicle, generate membrane curvature, and allow vesicles to pinch off the donor membrane toward the cytoplasm (23).
2-Adaptin has similarities to
1-adaptin, one large subunit of the trans-Golgi network/endosome adaptor AP-1, in both primary sequence and domain structure consisting of a N-terminal head and a C-terminal ear domain that are linked by a hinge region (24, 25). Despite their relatedness,
2-adaptin appears to serve a separate, yet unknown function distinct from that of AP-1 (26). Consistent with this, we previously demonstrated that L recruits
2-adaptin but not
1-adaptin in vivo (22).
In this study, we investigated the potential role of
2-adaptin played during virus production in HBV-replicating liver cells. By analyzing its mode of action in virus morphogenesis, we were expecting to elucidate one or more physiological functions of
2-adaptin. In parallel, we searched for intracellular compartments and additional host factors participating in HBV maturation with special emphasis on the viral core particle that contains a surface-exposed sequence matching the known PPXY late domain.
| EXPERIMENTAL PROCEDURES |
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2-adaptin containing the human
2-adaptin cDNA derived from hepatoma HepG2 cells with an N-terminal HA tag (25) was a gift from K. Nakayama, Tsukuba University, Japan. The deletion mutant
2HA
Ear lacking the C-terminal ear domain and parts of the hinge domain (amino acids 528-785) has been described previously (22). An oppositional mutant (
2HA
Head) devoid of the N-terminal head domain (amino acids 2-522) was constructed by cloning, and
2-adaptin mutants with lesions in the ubiquitin-interacting motif were generated by site-directed mutagenesis. For expression in Escherichia coli, plasmid pGEX-
2.14-533 was constructed, which carries the amino acid sequence 14-533 of
2-adaptin fused in-frame to the C terminus of glutathione S-transferase (GST) encoded by plasmid pGEX-3X (Amersham Biosciences). The human hemopexin gene was PCR-amplified and cloned from a liver cDNA library into the vector pCMV-HA (BD Biosciences, cloning details will be available on request). The plasmid pGADNOT carrying the human Nedd4.1 gene (8) was kindly provided by F. Bouamr (Howard Hughes Medical Institute, New York, NY). For ectopic expression in N-terminally, FLAG-tagged form, the Nedd4 gene was subcloned into the expression vector p3xFLAG (a gift from E. Gottwein, University of Heidelberg, Germany).
AntibodiesFor immunoprecipitation of enveloped HBV particles, a mixture of L- and S-specific rabbit antibodies was used as described previously (18). The L-specific monoclonal mouse antibody MA18/7 was generously provided by K.-H. Heermann (University of Göttingen, Germany). To generate core-specific antibodies, a C-terminally truncated core gene encoded by ptacVR4 (a gift from H. Meisel, Charité, Berlin, Germany) was expressed in E. coli, and capsids were purified by sucrose gradient centrifugation, according to a protocol of Maassen et al. (29). Polyclonal antisera against recombinant core particles (
K45) were raised in rabbits and proved to be suitable for immunoprecipitation of capsids. In parallel, rabbits were immunized with core particles that were denatured by boiling in 1% SDS/100 mM dithiothreitol. This antiserum (
K46) recognized core in Western blotting analyses. For detection of
2-adaptin, a rabbit antiserum (
K8330) generated against its C-terminal 19 amino acids was used (22). GST-specific antibodies were raised in rabbits by immunization of animals with recombinant purified GST. Mouse or rat monoclonal antibodies against the HA epitope were purchased from BabCO or Roche Applied Science, respectively. An anti-FLAG antibody was obtained from Sigma, a mouse antibody recognizing human heat shock protein Hsc70 was obtained from StressGen Biotechnologies, and a mouse antibody against human CD63 was purchased from Santa Cruz Biotechnology (Santa Cruz, CA). Peroxidase-labeled, secondary antibodies were obtained from Dianova and used in dilutions recommended by the supplier. The fluorophor-labeled antibodies AlexaFluor 488-conjugated goat anti-mouse immunoglobulin G, AlexaFluor 546-conjugated goat anti-rat immunoglobulin G, and AlexaFluor 647-conjugated goat anti-rabbit immunoglobulin G were purchased from Molecular Probes (Eugene, OR).
Cell Culture, Transfection, and RNA InterferenceThe human hepatoma cell line HuH-7 was used throughout. Transfections with plasmid DNAs were performed with Lipofectamine Plus (Invitrogen) as recommended by the manufacturer. The amounts of plasmids used in cotransfection experiments are indicated in the figure legends. Unless otherwise indicated, the cells were analyzed 72 h after transfection. For (co)transfection of cells with small interfering RNA (siRNA) or siRNA plus plasmid DNA, the TransMessengerTM transfection reagent from Qiagen was used. Briefly, 5 x 105 cells per well of a 6-well plate were transfected with 250 ng of siRNA either alone or in combination with 500 ng of RNase-free plasmid DNA according to the protocol of the supplier. For silencing in HBV-replicating HuH-7 cells, the cells were first transfected with siRNAs and pHBV for 2 days, and the transfection with siRNAs was repeated for another 2 days. Four siRNAs directed against
2-adaptin were designed by and obtained from Qiagen (4-for-Silencing kit) with the following sequences: #121 corresponds to the
2-adaptin target at nucleotide positions 359-379 (AAGGCCTGGCCTTGTGCACTT), #287 is directed against positions 832-852 (AACACGGACACCAGCCGAAAT), #689 corresponds to positions 2064-2084 (AAAACCCTGCTTTGCTGTTAA), and #690 targets nucleotide positions 2065-2085 (AAACCCTGCTTTGCTGTTAAT). A nonsense control siRNA (Qiagen) with no known homology to mammalian genes was used for control transfection experiments.
Cell Lysis and Immunoprecipitation ProceduresTo probe for protein expression and release into the extracellular medium, transfected cells were lysed in Tris-buffered saline (50 mM Tris-HCl, pH 7.5, 150 mM NaCl) containing 0.5% Nonidet P-40 for 20 min on ice. Lysates were centrifuged for 5 min at 15,000 x g and 4 °C and subjected to SDS-PAGE and Western blotting using standard procedures. Where indicated, the culture supernatants of transfected cells were analyzed in addition.
For
2-adaptin-specific coimmunoprecipitation studies, cells were lysed with a 2% solution of the non-denaturating detergent CHAPS-Hepes-buffered saline (50 mM Hepes-KCl, pH 7.5, 200 mM NaCl), supplemented with 1x protease inhibitor mixture (Serva) for 20 min on ice. After centrifugation, lysates were precleared with a 10% suspension of protein A-Sepharose (Amersham Biosciences) for 1 h at 4 °C with rocking. The lysates were then subjected to immunoprecipitation using 50 µl of a 10% protein A-Sepharose slurry that had been precoated with 10 µl of the core particle-specific
K45 antiserum. After incubation for 4 h at 4°C, immune complexes were washed three times with 0.5% CHAPS-Hepes-buffered saline and once with 125 mM Tris-HCl, pH 6.8, prior to SDS-PAGE and immunoblotting. Total protein extracts were included on the gels as controls.
To probe for Nedd4/core-complex formation, cells were broken by Dounce homogenization (30 strokes) in hypotonic buffer (10 mM Tris-HCl, pH 7.5, 1 mM MgCl2, plus protease inhibitors). Extracts were adjusted to 50 mM NaCl and subjected to centrifugation at 1,000 x g for 10 min at 4 °C to sediment nuclei, followed by centrifugation at 10,000 x g for 10 min at 4 °C. The soluble fraction was then precleared with protein A-Sepharose and subjected to a core-specific immunoprecipitation exactly as described above.
Detection of Intracellular HBV Nucleocapsids and Extracellular VirionsFor replication of HBV in HuH-7 cells, plasmid pHBV was used. 3-4 days after transfection, intracellular nucleocapsids and extracellular virions were isolated by capsid- or envelope-specific immunoprecipitations, respectively, prior to detection of the encapsidated viral progeny DNA by radioactive labeling of the partially double-stranded genome with [
-32P]dCTP (Amersham Biosciences) by the endogenous polymerase as described previously (18). After extraction of the labeled DNA genomes from the immunoprecipitated samples, they were resolved by agarose gel electrophoresis and visualized by using a PhosphorImager (Amersham Biosciences). Images were quantitated with ImageQuaNT software (Amersham Biosciences). Alternatively, the viral progeny DNA was detected on dot blots. To this aim, an EcoRI-linearized unit-length HBV genome was labeled with digoxygenin-dUTP by random priming as instructed by the manufacturer (Roche Applied Science). After extraction of the DNA genomes from the immunoprecipitated samples as described above, they were denatured by boiling in 0.4 M NaOH, 10 mM EDTA and filtered with a dot-blot manifold (Schleicher & Schüll) onto nylon membranes. The membrane was baked at 120 °C for 30 min and hybridized with the labeled probe according to the Roche Applied Science DIG DNA labeling and detection kit.
Pull-down AssaysFor ubiquitin pull-down assays, HuH-7 cells were lysed in assay buffer (25 mM Hepes-KCl, pH 7.4, 75 mM NaCl, 0.25% Triton X-100, 2.5 mM magnesium acetate supplemented with protease inhibitor mixture) 3 days post-transfection. Cleared lysates were immediately incubated with 50-µl aliquots of protein A-agarose (Sigma) or ubiquitin-agarose (Sigma) that had been prewashed 3x with assay buffer. Samples were reacted for 4 h at 4 °C with rocking in the presence of 0.1% bovine serum albumin. Precipitates were then washed 3x with 25 mM Hepes-KCl, pH 7.4, 75 mM NaCl, 0.25% Triton X-100, once with 125 mM Tris-HCl, pH 6.8, and subjected to HA-specific immunoblotting.
For GST pull-down experiments, wild-type GST and the GST fusion of
2-adaptin.14-533 (GST-
2.14-533) plasmids were expressed in transformed E. coli DH5
cells. Protein expression was induced with 1 mM isopropyl 1-thio-
-D-galactopyranoside for 4 h at 30°C, and cells were lysed by sonification in 20 mM Tris-HCl, pH 7.4, 50 mM NaCl, 0.2% Triton X-100, 1 mg/ml lysozyme supplemented with protease inhibitor mixture. The GST proteins were purified on glutathione-Sepharose 4B beads (Amersham Biosciences), according to the manufacturer's instructions. Beads loaded with 20 µg of recombinant proteins were equilibrated in assay buffer (25 mM Hepes-KCl, pH 7.4, 75 mM NaCl, 0.25% Triton X-100, 2.5 mM magnesium acetate) and incubated with 20 µg of recombinant core particles that were produced in E. coli as described above (see "Antibodies"). After rotation at 4 °C for 4 h, the beads were washed 3x with 25 mM Hepes-KCl, pH 7.4, 75 mM NaCl, 0.25% Triton X-100, once with 125 mM Tris-HCl, pH 6.8, and subjected to core-specific immunoblotting.
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| RESULTS |
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2-Adaptin Inhibits HBV Viral Particle ReleasePrevious experiments in our laboratory demonstrated that the HBV L envelope protein specifically interacts with
2-adaptin by complex formation depending on the ear domain of
2-adaptin and a preS-specific subdomain of L, known to be essential for capsid envelopment (22). To probe whether
2-adaptin actually plays a role in virus replication, we sought to deplete it from HBV-producing cells. By testing four different small interfering RNAs (RNAi) for their capacity to reduce the expression of
2-adaptin, two molecules directed against C-terminal sequences of
2-adaptin (#689 and #690) proved to be effective, while the two other siRNAs with targets in the N-terminal protein domain (#121 and #287) did not deplete
2-adaptin (Supplemental Fig. S1). Because the #690 molecule turned out to be the most effective siRNA, it was chosen for the silencing analyses. Human hepatoma HuH-7 cells were transiently cotransfected with an expression vector carrying a cloned, replication-competent HBV genome (pHBV, HBV replicon) together with the siRNA #690 or a nonsense control siRNA (control). Of note, transfected liver cell lines support the production of infectious virions, but are refractory to the uptake of progeny HBV particles (30). Western blot analysis of the cells showed that the 90-kDa
2-adaptin protein had been down-regulated >70% in siRNA #690-transfected cells as compared with mock treated cells (Fig. 1A). Under these conditions, neither the intracellular level of the viral L envelope protein nor that of the core protein was affected (Fig. 1A). This indicated that the synthesis, stability, and/or half-lives of the viral envelope and capsid substructures were independent of
2-adaptin function. We next assayed the depleted cells for the production and release of virions using immunoprecipitation of cellular supernatants with envelope-specific antisera, radioactive labeling of the partially double-stranded HBV genome by the viral endogenous polymerase, and detection of the genome by gel electrophoresis. In parallel, intracellular nucleocapsid assembly was investigated using core particle-specific antibodies for immunoprecipitation of cellular lysates prior to the endogenous polymerase reaction (EPR). As shown in Fig. 1A, nucleocapsid assembly within the cells was virtually unaffected, irrespective of whether
2-adaptin was knocked down or not. By contrast, the degree of virion release into the medium of silenced cells was significantly reduced. Triplicate analyses and quantification determinations revealed a close correlation between the level of
2-adaptin inhibition (74 ± 3.4%) and the suppression of HBV export (49 ± 5.2%) in such that an enhanced depletion of
2-adaptin corresponded to a progressive depletion of virus release. The analysis of the two non-silencing siRNAs #121 and #287 and the other silencing molecule #689 supported this notion, because it established an excellent correlation between depletion of
2-adaptin and HBV production (Supplemental Fig. S1). These results indicate that
2-adaptin mediates one or more productive steps in the late stages of HBV assembly and/or egress.
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2-Adaptin Does Not Inhibit Protein SecretionThe route of HBV egress is unclear as yet but has been suggested to involve the constitutive pathway of secretion (14). Because the physiological function of
2-adaptin is likewise unknown, the observed block to HBV release could simply be due to a general distortion of the cell secretory apparatus imposed by the absence of
2-adaptin. To address this point, we assessed the secretion competence of
2-adaptin-depleted HuH-7 cells. As a reporter, we used hemopexin (Hxp), a soluble secretory protein, and coexpressed it in HA-tagged form together with the silencing or nonsense siRNAs. As shown by specific immunoblotting, the knockdown again reduced
2-adaptin by
70% but had virtually no effects on the secretion of Hxp (Fig. 1B). Similar results were obtained when the fate of the HBV small S envelope protein was investigated in such depleted cells. The S protein is known to self-assemble into empty envelope particles that mature by budding into intraluminal cisternae of post-ER/pre-medial-Golgi compartments and to exit the cell by the constitutive secretory pathway (14). On cotransfection of the HA-tagged S protein with the inhibitory siRNA, the level of S secretion was identical to that obtained with control-treated cells (Fig. 1B). Together, these results show that
2-adaptin did not play a role in the constitutive pathway of secretion. Moreover, these data also implicate that the assembly and budding of HBV empty envelope S particles did not depend on the action of
2-adaptin. Hence, the mechanisms of HBV subviral and viral particle production appear to differ in their requirement of cell function(s).
2-Adaptin Interacts with HBV Core ParticlesDue to their modular domain organization, large adaptin molecules of AP complexes are known to interact with several protein partners thereby assembling adaptor-specific protein networks (23, 31). In analogy, we reasoned that
2-adaptin could act to link the viral envelope and nucleocapsid at the HBV assembly site. To detect an interaction between the HBV core and
2-adaptin in living cells, we performed coimmunoprecipitation experiments. HuH-7 cells were cotransfected with expression vectors encoding the core gene either alone (Core) or in the context of the HBV replicon (HBV) together with a HA-tagged version of
2-adaptin. Three days after transfection, lysates were prepared with a mild detergent and analyzed for protein expression by core- and HA-specific Western blotting.
2-Adaptin appeared in the expected position of 90 kDa, and the core protein was obtained as a 21-kDa species (Fig. 2A). Precleared lysates were next subjected to immunoprecipitation with antiserum specific for core particles (
K45), and the immune complexes were examined by HA-specific immunoblotting. As shown in Fig. 2A,
2-adaptin was indeed efficiently coprecipitated with core. Complex formation between core and
2-adaptin was observed when core alone was expressed and in the context of productive virus formation. Because
2-adaptin interacted with core even in the absence of the other viral gene products, the interaction proved to be direct rather than being indirectly mediated by the L envelope protein. Similarly, our previous results (22) had demonstrated a physical L/
2-adaptin-interaction that does not require the presence of core. Together, these findings indicate that the HBV core particle and the envelope interact on the same adaptor protein.
To corroborate this finding we analyzed whether core also interacts with the endogenously expressed
2-adaptin as is the case for L (22). Lysates of cells transfected with the core gene were immunoprecipitated with the core-specific rabbit antiserum, and the precipitates were immunostained with a rabbit antiserum against
2-adaptin (22). Although the overall background labeling was higher in this assay, likely due to the utilization of antisera from the same species, complex formation between core and the endogenously synthesized
2-adaptin could be detected (Fig. 2B).
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2-adaptin-interacting properties of core and L, we next asked whether they use a common interaction surface of
2-adaptin. By using a C-terminally truncated mutant of
2-adaptin (
2HA
Ear), we previously mapped its ear domain as the binding site for L (22) and now analyzed whether the same may be the case for core. In addition, a reciprocal mutant depleted for the N-terminal head domain (
2HA
Head) was constructed and assessed for an interaction with core using the cotransfection and coimmunoprecipitation assay as described in Fig. 2A. Although both mutants were stably synthesized, the
2HA
Head mutant clearly failed to interact with core, whereas core binding of the
2HA
Ear mutant was unaffected (Fig. 2C). The combined results indicate a bipartite interaction mechanism in such that the head domain of
2-adaptin is necessary for the association with core, whereas its ear domain mediates binding to L.
2-Adaptin Is a Ubiquitin-binding Protein and Interacts with HBV Core Particles in a Ubiquitin-dependent MannerTo further define the role of
2-adaptin in HBV maturation, we tried to identify the structural determinants of the interaction between
2-adaptin and core in more detail. Inspecting the primary sequence of
2-adaptin, we noted the existence of a putative ubiquitin-interacting motif (UIM) located in its head domain at amino acid positions 369-377. The UIM motif was originally identified by data base searches for sequences similar to a 20-amino acid motif in the S5a (Rpn10) subunit of the proteasome that interacts with ubiquitin (32). It comprises a highly conserved core sequence
XXAXXXSXXe, in which
denotes a large hydrophobic residue, X is any amino acid, and e denotes an acidic residue, which is, however, the less conserved residue within UIMs. As
2-adaptin contains such a motif except for the terminating acidic residue (Fig. 3A), we analyzed whether it could interact with ubiquitin. By performing pull-down analyses, we indeed observed binding of HA-tagged
2-adaptin from a HuH-7 lysate to ubiquitin-agarose, but not protein A-agarose (Fig. 3B). To further characterize the interaction between
2-adaptin and ubiquitin, we generated
2-adaptin mutants with either point mutations in the conserved UIM
, alanine, and serine residues (
2.m1 and
2.m2) or a precise deletion of the UIM (
2.m3) (Fig. 3A). All three mutants were expressed at the same level as wt
2-adaptin in transfected cells, but their ability to bind to ubiquitin-agarose was severely diminished. Although the
2.m1 and
2.m2 mutants carrying inactivating mutations still displayed a weak interaction with ubiquitin, the
2.m3 mutant devoid of the UIM was completely blocked in ubiquitin binding (Fig. 3C). To our knowledge, this is the first demonstration that a putative member of the "classic" adaptin protein family exhibits a ubiquitin-interacting ability.
Because there is evidence that ubiquitin participates in the budding processes of several enveloped RNA viruses (1-4), we next asked whether the UIM of
2-adaptin contributes to the interaction with the HBV core particle. Therefore, HuH-7 cells were cotransfected with core and the UIM-deficient
2.m3 mutant, and lysates were probed by core-specific immunoprecipitation followed by HA-specific immunoblotting for
2-adaptin as described above. In fact, the
2.m3 mutant demonstrated a strong inhibition of core binding compared with that of the wt protein (Fig. 3D). We took the UIM-dependent interaction between core and
2-adaptin as a first hint that ubiquitin recognition by
2-adaptin may be important for HBV assembly. Given the failure of the
2.m3 mutant to productively associate with core, we considered that its overexpression might act in a trans-dominant negative manner thereby interfering with HBV release. However, we observed that heavy overexpression of even the wt
2-adaptin alters cell physiology and, surprisingly, leads to a specific post-translational down-regulation of the HBV gene products (data not shown).
HBV Core Lysine Residue 96 Is Essential for Virus Release and Interaction with
2-AdaptinThe known sites of ubiquitination are free amino groups on lysine side chains of a target protein to which ubiquitin becomes covalently attached. The HBV core protein contains two lysine residues at amino acid positions 7 and 96 that are conserved among all HBV genotypes (Fig. 4A). To investigate the impact of these residues on virus formation, they were individually substituted by alanines. Because an introduction of these mutations into the HBV replicon would simultaneously affect the overlapping polymerase gene, the mutations were created in the pC expression plasmid. These plasmids were then used to trans-complement a core-negative HBV replicon (pHBV.C-) that is blocked in core expression due to a stop codon introduced in the N terminus of the core gene. Upon cotransfection of HuH-7 cells, the C.K7A and C.K96A mutants were stably expressed as shown by core-specific immunoblotting (Fig. 4B). In addition, both mutants formed intracellular nucleocapsids as efficiently as wt core, thus indicating that the mutations neither affected capsid assembly nor packaging of the viral genome. However, when cellular supernatants were assayed for the production and release of virions, the C.K96A mutant was completely blocked, whereas the C.K7A mutant was not (Fig. 4B).
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2-adaptin. Indeed, by performing the cotransfection and coprecipitation assay as outlined above, we found that the C.K96A mutant failed to interact with
2-adaptin (Fig. 4C). In contrast, the lysine residue at position 7 that is dispensable for virus production proved to be equally dispensable for interacting with
2-adaptin (Fig. 4C). Together, the strict correlation between virus production and core/
2-adaptin complex formation and vice versa confirmed the pivotal role of
2-adaptin in HBV assembly. Furthermore, these results indicate that both processes critically depend on lysine 96 of core.
In combining our data, the simplest causal link could be that lysine 96 of core might be ubiquitinated and that such modified core particles might be recognized by
2-adaptin in an UIM-dependent manner. We made several attempts to detect ubiquitinated core products, but all results were uniformly negative. By using different ubiquitin-reactive antibodies, ectopic expression of an epitope-tagged ubiquitin, and/or cell lysis conditions with strong denaturants in the presence of N-ethylmaleimide to prevent post-lysis removal of ubiquitin from core by de-ubiquitinating enzymes, modified core molecules could not be observed.
To obtain further, albeit indirect evidence for a role of ubiquitin in core/
2-adaptin-complex formation, we performed in vitro binding experiments with recombinant core and
2-adaptin produced in bacteria. Because prokaryotes lack the ubiquitin modification system, we were expecting that in the absence of ubiquitin an interaction between core and
2-adaptin should not occur. To this aim, a C-terminally truncated core gene (Core
150-183) was expressed in E. coli, and capsids were purified by sucrose gradient centrifugation (29). For
2-adaptin, we prepared a GST fusion, including its amino acid sequence 14-533 (GST-
2.14-533), and hence its UIM motif. The fusion protein and unfused GST were immobilized onto glutathione-Sepharose and incubated with recombinant core particles (Supplemental Fig. S2). Immunoblot analysis of the beads with core-specific antiserum revealed no binding of core to GST-
2.14-533, thus implicating that the lack of ubiquitin under these assay conditions prevented the core-
2-adaptin complex formation.
Nedd4 Interacts with HBV Core ParticlesRecent evidence suggests that ubiquitin-conjugating activities induced by viral late domains are part of retroviral budding strategies (4, 9, 10). Intriguingly, the HBV core contains a PPXY-like motif (Fig. 4A) that is exposed on the capsid surface according to a cryoelectron microscopy map (33). Based on findings for budding RNA viruses, this motif could be a binding site for Nedd4 proteins, a family of ubiquitin-ligating enzymes with N-terminal lipid-binding domains, central proline-recognition WW domains, and C-terminal E3 ubiquitin ligase domains (HECT) (34). To test this hypothesis, the human Nedd4.1 gene was expressed in N-terminally FLAG-tagged form in HBV-replicating cells. Probing cell extracts with anti-FLAG and anti-core antibodies demonstrated efficient ectopic expression of the 120-kDa Nedd4 protein as well as stable synthesis of core (Fig. 5). Importantly, when immune complexes were isolated with antibodies against core particles and examined by FLAG-specific Western blotting, we could easily identify coprecipitated Nedd4. Because only a faint background band was visible in samples prepared from mock transfected cells, the association proved to be specific. To analyze whether the late domain-like sequence of core is involved in binding to Nedd4, two mutants were generated in which the first proline (C.P129A) or the tyrosine (C.Y132A) of the PPAY motif were replaced by alanines. Western blotting of lysates of cotransfected cells showed stable synthesis of both core mutant proteins and confirmed equal levels of Nedd4 expression (Fig. 5). The subsequent coimmunoprecipitation reproducibly revealed that the C.Y132A mutant was completely devoid of Nedd4-binding activity. Surprisingly, however, the C.P129A mutant still associated with Nedd4 (Fig. 5). Similar results have been reported by Martin-Serrano et al. (11) who analyzed the sequence requirements of the PPXY late domain of murine leukemia virus (MLV) Gag for HECT ubiquitin ligase binding and found that a mutation of the first proline residue was less detrimental as compared with that of the tyrosine.
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HBV Core and Envelope Colocalize with
2-Adaptin in the Endocytic PathwayThe aforementioned data collectively suggest that
2-adaptin and Nedd4 (co)operate at late stages of HBV assembly and release, possibly at the site of virus budding. Because both proteins have been implicated to localize and/or to act at endosomal compartments (25, 34), we hypothesized that HBV might utilize these structures during maturation. To test this hypothesis, we performed indirect immunofluorescence analyses of HBV-producing HuH-7 cells that were cotransfected with HA-tagged
2-adaptin. In the first set of triple labeling experiments, shown in Fig. 7, we focused on the L envelope protein that had been shown to leave the ER after its synthesis (28). Concordantly, L revealed a faint perinuclear ER-like staining, but was enriched in a juxtanuclear punctuate structure at steady state (blue).
2-Adaptin was localized to paranuclear structures (red), and, consistent with our previous results (22), a significant portion colocalized with the L-specific juxtanuclear region as indicated by the purple fluorescence in the merged image. To examine the subcellular localization of the L-
2-adaptin complex, we costained cells with antibodies against CD63, a tetraspanin found in late endosomes and MVBs (green). Remarkably, we observed substantial colocalization of L and CD63 (turquoise), as well as of
2-adaptin and CD63 (yellow). Accordingly, the spatial proximity of L,
2-adaptin, and CD63 resulted in a white fluorescence in the merged image. This indicates that, at a steady state, L and
2-adaptin colocalize on a subset of CD63-positive structures (see also Supplemental Fig. S3).
Similar results were obtained when we costained these cells with antibodies against core particles,
2-adaptin and CD63 (Fig. 8). In agreement with previous studies, core was distributed in both the cytoplasm and the nucleus (blue). Its nuclear localization is likely based upon the reimport of nucleocapsids into the nucleus for amplification of the viral genome (36). Consistent with our coprecipitation analyses, costaining for
2-adaptin (red) showed an extensive colocalization with core, particularly in a perinuclear circular region (purple). As was the case for L, a fraction of the cytoplasmic core pool was also found in CD63-positive structures (yellow), thus pointing to an endosomal distribution of core particles. An overlay of the three fluorescence patterns yielded a striking degree of colocalization of core,
2-adaptin and the MVB marker (white). We conclude from our imaging data that a significant proportion of both L-
2-adaptin and core-
2-adaptin complexes are present in the endosomal pathway of virus-replicating cells.
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| DISCUSSION |
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2-adaptin, a candidate cellular trafficking adaptor. In our previous studies we found that the viral L envelope protein interacts directly with
2-adaptin (22). Here we show that the viral core interacts on the same adaptor. Disruption of these interactions by specific siRNA depletion of
2-adaptin inhibits HBV release without compromising the cell secretory apparatus. Because nucleocapsid assembly and envelope maturation were unimpaired in depleted cells,
2-adaptin apparently acts late in the HBV assembly pathway, being responsible for one or more steps involving (i) the intracellular trafficking of the viral components, (ii) their linking and concentrating at the budding site to promote the pinching-off reaction, and/or (iii) the routing of virus exit from the cells. Our data demonstrating a dual, yet independent interaction of
2-adaptin with both the envelope and the core particle implicate that
2-adaptin primarily functions to sort and tether the viral sub-structures. By exploiting the same adaptor protein, HBV has seemingly adopted a novel strategy that ensures the meeting and coupling of the viral subunits during assembly. Adaptor protein members have also been implicated to facilitate the production of enveloped RNA viruses, in particular retroviruses. For the human immunodeficiency virus type-1 (HIV-1), the AP-3 complex mediates the correct trafficking of the Gag protein to the budding site (37). The Gag proteins of equine infectious anemia virus and MLV utilize the endocytic AP-2 complex or AP-2-associated endophilins, respectively, during the assembly of virus-like particles (12, 13, 38). However, because retroviral Gags can bud in the absence of any other viral proteins, these studies did not include the viral envelopes. It would therefore be interesting to examine whether the adaptors engaged by these viruses may simultaneously target the envelope, as is the case for HBV.
A tethering role of
2-adaptin played during HBV production would be compatible with known functions of adaptor protein (AP) complex subunits that were originally termed "assembly polypeptides," because they can form interconnected networks to select different types of cargo proteins destined for inclusion into coated vesicles (23, 31, 39). Incompatibly, however, AP-made vesicles bud into the cytoplasm, which is the topological reverse of HBV budding into the lumen of intracellular compartments. This raises the possibility that
2-adaptin may not operate as a typical vesicle-forming adaptor. In support of this notion,
2-adaptin-containing AP complexes have not been identified so far. Moreover,
2-adaptin is unable to functionally substitute for the closely related
1-adaptin, one large subunit of AP-1, as shown by embryonic lethality in mice upon homozygous disruption of the
1-adaptin gene (26). Our silencing experiments indicate that the loss of
2-adaptin cannot be rescued by
1-adaptin and add further evidence for
2-adaptin being a unique entity distinct from
1-adaptin. The unique function(s) of
2-adaptin may rely on its ubiquitin-binding ability, specified by an UIM motif, that we uncovered in this work. To our knowledge, such ability has not been found for any member of the typical adaptor protein family. Rather, there is accumulating evidence that ubiquitin-interacting activity is a common feature of monomeric adaptors, like, e.g. epsin and Hrs, which control ubiquitin-dependent endocytic sorting processes to the MVB/lysosome (40, 41). Interestingly, recent studies have revealed that ubiquitin recognition is also employed by the monomeric Golgi-localizing,
-adaptin ear domain homology, ADP-ribosylation factor-binding proteins (GGAs) that sort biosynthetic cargo from the trans-Golgi network to the endosomal system without being major constituents of the transport vesicle (42, 43). Because
2-adaptin is clearly a new member of ubiquitin receptors, it is tempting to speculate that
2-adaptin may also function as a monomeric adaptor for ubiquitin-mediated sorting steps within the endosomal system.
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2-adaptin and core involved the UIM and, presumably, therefore the ubiquitin-binding function of
2-adaptin. Second, the other key finding of this study is that core particles stably interacted with Nedd4 ubiquitin ligase in vivo. The recruitment of Nedd4 involved the late domain-like PPAY sequence of core, as a single point mutation of the tyrosine disrupted Nedd4 binding. And third, ectopic expression of a catalytically inactive dn mutant of Nedd4 proved to be a potent inhibitor of HBV egress, indicating that the active site of the ligase and, hence ubiquitination of a substrate protein functionally contribute to virus production. Under these conditions, HBV release was substantially reduced but not totally blocked. Similar observations have been made for retroviral PPXY-containing Gag proteins of the Rous sarcoma virus and the human T-cell leukemia virus type-1 whose budding was not completely abrogated on overexpression of a dn Nedd4 mutant (9, 10). Possibly, functionally redundant ubiquitin ligase isoforms (34) can partially substitute for the enzymatic inactive Nedd4.
The participation of both ubiquitin ligating and binding proteins in HBV maturation suggests that core may be a target for ubiquitination by Nedd4 and, subsequently, for UIM-dependent recognition by
2-adaptin. Indeed, we found that mutating one of the two potential ubiquitin acceptor lysine residues of core (C.K96A) induced a defective assembly phenotype, similar to those observed by interference with Nedd4 and
2-adaptin functions, along with a loss of
2-adaptin recruitment. However, our attempts to identify ubiquitination of core have been unsuccessful so far. One feasible explanation for this observation is that only a few molecules of the core particle, composed of 240 monomers, may be transiently conjugated with ubiquitin, and as such hampers detection. Consistent with this, the amount of ubiquitin linked to PPXY-containing retroviral Gags has been reported to be very low (44). Another possible interpretation of this result is that the relevant target for ubiquitination by Nedd4 is not core itself but is rather an undefined cellular factor. One likely binding site for such a factor could be a cluster of amino acids, including the critical lysine 96, that are exposed on the core particle surface and essential for envelopment (19). This factor could then be ubiquitinated by the nearby Nedd4, allowing ubiquitin-dependent recognition by
2-adaptin. Similar conclusions have been drawn from studies with the retroviral HIV and MLV Gag proteins where experiments with proteasome inhibitors revealed that budding of these Gags requires a functional ubiquitin-proteasome system. However, mutational analyses of their target lysine residues showed that Gag ubiquitination per se is not required, suggesting ubiquitination of factors other than the viral proteins to promote budding (44-46).
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2-adaptin and core-
2-adaptin complex formation in living cells but also showed that both complexes colocalized with CD63-positive structures. The spatial proximity of the marker and the two complexes, together with the essential role of
2-adaptin in late stages of virus replication suggest that
2-adaptin may organize HBV assembly platforms on endosomal membranes.
Although the precise mechanisms by which
2-adaptin and Nedd4 govern HBV maturation remain to be elucidated, the collective data led us to propose the following sequence of events accompanying virus assembly. First, according to immunolabeling and biochemical studies (22, 28), the transmembrane envelope proteins are transported out of the ER along the secretory pathway to at least the medial Golgi stacks where their N-linked glycans acquire modifications (48). Based on our previous work, L accumulates at Golgi-like structures where it recruits
2-adaptin via its cytoplasmically oriented preS domain (22). Simultaneously, nucleocapsids mature in the cytoplasm thereby recruiting Nedd4 by their surface-accessible late domain-like motif. Ubiquitin deposition, whether it is on core or a bystander protein, would next be recognized by the UIM motif of
2-adaptin bound to transmembrane L. This HBV assembly complex may then be sorted to the MVB by means of
2-adaptin, similar to the action of the GGA ubiquitin receptors that can sort ubiquitinated membrane cargo from the trans-Golgi network to MVB (42, 43). Alternatively, Nedd4, associated with the assembly complex, may provide the link to the MVB, because a recent report has demonstrated an interaction between Nedd4 and Tsg101, the entry component of the MVB endosomal sorting complex required for transport-I (49). In this scenario, virions would bud into the MVB and exit the cell by the exosome pathway, as is the case for HIV-1 in infected macrophages (50). However, it is equally possible that the MVB machinery is recruited by virtue of
2-adaptin and/or Nedd4 to the HBV assembly platform where it could catalyze the pinching-off reaction of viral particles into the lumen of compartments for subsequent vesicular transport out of the cell.
In summary, our observations that
2-adaptin and Nedd4, likely in conjunction with ubiquitin, are part of the HBV assembly pathway highlight mechanism by which viral and cellular components interact to generate HBV particles. The full functional significance of these host factors in HBV replication is a focus of ongoing investigation. This study also demonstrates that HBV maturation shares considerable similarities with budding processes of enveloped RNA viruses, thus raising the possibility that different classes of virus might exit the cell by appropriating functions of the endosomal sorting machinery. The identification of
2-adaptin as a ubiquitin receptor is another aspect that deserves further study.
| FOOTNOTES |
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The on-line version of this article (available at http://www.jbc.org) contains supplemental Figs. S1-S3. ![]()
1 These authors contributed equally to this work. ![]()
2 To whom correspondence should be addressed. Tel.: 49-6131-393-6750; Fax: 49-6131-393-2359; E-mail: prange{at}mail.uni-mainz.de.
3 The abbreviations used are: MVB, multivesicular body; HBV, hepatitis B virus; ER, endoplasmic reticulum; AP, adaptor protein; HA, hemagglutinin; wt, wild-type; siRNA, small interfering RNA; EPR, endogenous polymerase reaction; Hxp, hemopexin; UIM, ubiquitin-interacting motif; MLV, murine leukemia virus; dn, dominant-negative; HIV-1, human immunodeficiency virus type-1; GST, glutathione S-transferase; GGA, Golgi-localizing,
-adaptin ear domain homology, ADP ribosylation factor-binding proteins; CHAPS, 3-[(3-cholamidopropyl)-dimethylammonio]-1-propanesulfonate; CMV, cytomegalovirus; E3, ubiquitin-protein isopeptide ligase; RNAi, RNA interference. ![]()
| ACKNOWLEDGMENTS |
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| REFERENCES |
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