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J. Biol. Chem., Vol. 281, Issue 46, 35186-35201, November 17, 2006
PEGylation and Multimerization of the Anti-p185HER-2 Single Chain Fv Fragment 4D5
EFFECTS ON TUMOR TARGETING*
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| ABSTRACT |
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| INTRODUCTION |
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Depending on the desired mode of action, the pharmacokinetic properties of the therapeutic molecule need to meet different requirements. When a cytotoxic principle is used, it is essential that the action is restricted to the tumor site as much as possible, and that the activity in normal tissues is limited both in magnitude and duration. Conversely, if the mode of action does not include a cytotoxic mechanism, accumulation in normal tissues may be less harmful, and high concentration at the tumor site can be the main criterion.
The in vivo behavior of the antibody format is dictated by its molecular properties. Therefore, to enhance the efficacy of therapeutic antibodies, understanding how changes of the molecular format may affect the pharmacokinetic behavior is crucial. Critical determinants of tumor targeting efficiency are specificity, affinity, valency, stability, surface charge, and size (6, 7).
In the present study, we focus on two of these parameters: functional affinity (avidity) and molecular size. Increasing the functional affinity of antibodies usually results in increased tumor localization and retention. However, there seems to be an upper limit in affinity beyond which no further improvement can be achieved (6, 8, 9): in the "loading phase", the total dose of antigen-bound antibody molecules accumulating at the tumor is limited by plasma clearance (depletion of the plasma pool) and diffusion, in addition to the total amount injected (bolus size). In the "retention phase," antigen metabolism, which includes shedding and internalization, may become rate limiting, if this occurs faster than antibody dissociation (10-12). Biodistribution studies in SCID mice with various anti-HER-2 (13) and anti-CEA5 (14) antibodies of different affinities demonstrated that for a tumor antigen with the turnover rate of HER-2, raising the affinity above 10-9 M no longer translates into increased tumor accumulation.
One way to augment the functional affinity (avidity) of antibodies is to increase the number of binding sites (15, 16). Multivalency in principle allows the antibody to simultaneously bind to more than one target molecule on the tumor cell, provided that this is geometrically possible. By potentially affecting target dimerization, multimeric antibody formats may also increase antigen uptake and signaling. Whether this is desirable or not depends on the target and the effector mechanism of the antibody construct.
An increase in valency also results in increased molecular size, which will affect pharmacokinetics, extravasation, and diffusion, and thus tissue distribution. Indeed, there is an inverse relationship between the effect of molecular size on systemic clearance and tissue penetration, which both affect tumor targeting, albeit in opposite ways (6). Small antibody formats such as scFv fragments (25-30 kDa) show rapid tumor localization and efficient diffusion into the tumor mass, reaching maximal accumulation after 0.5-6 h. Their systemic clearance is fast and occurs mainly through renal excretion, since their molecular weight is below the threshold of the filtration barrier in the kidney glomeruli (
65 kDa) (17, 18). This results in rather low concentrations of scFv molecules in the circulation, which in turn reduces unspecific accumulation in non-target tissues, but it also reduces the total dose localizing to the tumor (19). On the other hand, large molecules, such as whole IgGs, show poor extravasation and slower tissue diffusion (20, 21). At the same time, they can exhibit prolonged serum half-lives of up to several weeks (19), because they avoid renal excretion and are instead removed by the more delayed hepatic clearance (22). The resulting high serum concentration favors accumulation in the tumor, but also unspecific localization in non-target tissues.
To define the optimal format for particular applications, various antibody formats including scFv fragments, Fab fragments, disulfide-stabilized Fv fragments (dsFv), minibodies, and miniantibodies (16) have been engineered and tested in biodistribution experiments. Although available data demonstrate that they greatly vary in tumor targeting efficiency (23-40), direct comparisons are problematic because of the great differences among the various tumor models and antigens used.
Here we systematically examined the molecular and tumor targeting properties of a series of antibody formats all derived from the same antibody fragment, as a step toward a better understanding of the relation and interdependence of these factors. As a model system, we used the humanized scFv 4D5 (24, 41). This antibody shows above-average thermodynamic and serum stability and binds selectively with high affinity to its target antigen, the extracellular domain of p185HER-2 (35, 42) (referred to here as HER-2).
HER-2 is a 185-kDa transmembrane glycoprotein of the family of human epidermal growth factor receptors (HER) (43, 44). It is overexpressed in 20-30% of breast cancers and in a variety of other tumors of epithelial origin (45, 46). It plays a key role in HER ligand-dependent tumor growth and can either form homo- or heterodimers with other HER receptors (47).
Based on the scFv 4D5, we constructed four different antibody formats by multimerization and PEGylation, and compared their molecular and tumor targeting properties to those of the scFv 4D5 itself. First, dimeric and tetrameric miniantibodies were constructed by fusion of self-associating peptides to the C terminus of the scFv 4D5. In this approach an increase in valency was combined with a change in size from 29 kDa (monomeric scFv) to 66 kDa (dimer), which is slightly above the renal filtration threshold, and up to 130 kDa (tetramer), which is almost the size of a whole IgG. To further stabilize the multimeric formats and prevent their dissociation at high dilution, the multimerization domains were covalently linked by structure-guided introduction of disulfide bridges. In the second approach a 20-kDa polyethylene glycol moiety (PEG20) was site-specifically attached to the C terminus of the scFv 4D5. Thereby, the molecular weight of the antibody fragment was increased without altering its valency to enable us to discriminate the effects because of valency from those due to size. The PEG molecule is a non-immunogenic, hydrophilic polymer, rapidly fluctuating between bulky and extended structures (48-50). Because a PEG-tail is not a rigid moiety, but quite flexible, it can also act to shield protein sites from recognition by the immune system, cellular receptors, or proteases (51). Finally, multimerization and PEGylation were combined by site-specific PEGylation of the dimeric miniantibody.
To assess the potential of these modifications for tailoring effective antibody therapeutics, the various formats were compared regarding their antigen binding properties, serum stability, and in vivo biodistribution. By individually testing multimerization and PEGylation, we wished to differentiate the influence of changes in functional affinity from those of molecular size on the pharmacokinetic and tumor targeting behavior.
| EXPERIMENTAL PROCEDURES |
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Molecular Modeling of the Multimerization Domains to Determine Suitable Positions for Introduction of Disulfide BondsThe three-dimensional models of the multimerization domains were generated by using the molecular modeling software InsightII (Accelrys, San Diego, CA). The model of the dimerization domain dhlx was obtained from the average NMR structure of the corresponding synthetic peptide (52). The model of the tetramerization domain p53 was based on the crystal structure of the corresponding human peptide (53). Potential positions for insertion of disulfide bonds were determined with the program MODIP (54) using the following search parameters: allowed C
-C
distance
7.4 Å, allowed C
-C
distance
4.7 Å, pseudo bond angles in the range of 60° to 180° and disallowed pseudo-dihedral angles between 60° and 80°. The resulting models of the multimerization domains with cross-linked peptide chains were checked for possible strain and clashes.
Construction of the Cysteine MutantsThe dimeric miniantibodies with C-terminal (4D5-dhlx-Cys) or internal cysteines (4D5-dhlx-SS) were derived from the construct 4D5-dhlx (35). The mutant 4D5-dhlx-SS with internal cysteines was generated by a two-step PCR mutagenesis of the dimerization domain, using the primer dhlx-m2 (5'-CCCCGCAAAGGCGAACTCTGCGAACTGCTGAAACATCTGAAGGAGCTGTGTAAAGGTG), which encodes point mutations that replace Glu23 and Ile33 of the dhlx domain by cysteines.
The same method was applied to obtain the tetrameric miniantibody 4D5-p53-SS. For introducing a cysteine at position Ala347 of the tetramerization domain we used the primer tetracys-fwd (5'-GCTGAATGAGTGCTTGGAAC) and performed PCR amplification of the vector template pIG6-4D5-p53 (35).
To enable site-specific PEGylation (55) of the monomeric scFv 4D5 (35, 41, 42, 56) and the dimeric antibody fragment 4D5-dhlx (35) with maleimide-PEG20, we added a cysteine at the C terminus of the peptide chains. For the monomeric scFv 4D5 the cysteine was introduced by PCR mutagenesis using the primer sk-cyst.rev (5'-GCATAAGCTTTCATTAACAACCACCGTGATGGTGATGGTGGTGGTTCAGGTCTTCTTCAG), which encodes a Gly2-linker, followed by a single unpaired cysteine, 2 stop codons, and a HindIII restriction site. The dimeric miniantibody 4D5-dhlx-Cys with C-terminal cysteines was generated by ligation of the EcoRI/HindIII fragment of the plasmid pAK300-B2 into the vector pIG6-4D5 (35, 41, 42, 56). This insert was thereby placed downstream of the variable domains of the scFv 4D5 and contained the dimerization domain dhlx, followed by a His6 tag, a Gly4 spacer, and a cysteine. All four different antibody constructs were inserted into the expression vector pIG6 (57), like their unmodified counterparts. The correct DNA sequences of the new constructs were confirmed.
Expression and PurificationThe expression and purification of the 4D5 antibody fragments are described in detail under supplementary materials. Briefly, all antibody constructs were expressed in the periplasm of the Escherichia coli strain SB536 (58) and purified at 4 °C by Ni-NTA chromatography and then protein A-Sepharose (because this VH domain binds to protein A). The purified proteins were analyzed by UV-spectrometry and SDS-PAGE.
PEGylation of the 4D5 MiniantibodiesThe PEGylation procedure of monomeric (scFv 4D5-Cys) and dimeric (4D5-dhlx-Cys) miniantibodies is described under supplementary materials. Briefly, purified protein samples were concentrated to
0.3-1 mg/ml. The C-terminal cysteine residue was selectively reduced by preincubation with 3 mM dithiothreitol (final concentration) before incubation with a 5-10-fold molar excess of maleimide-PEG20 (Nektar, Huntsville, AL) for 2 h at 37 °C. The efficiency of PEGylation was analyzed by SDS-PAGE and size exclusion chromatography. The same chromatography procedure was used to purify the PEGylated proteins from both the native antibody fragments and the unreacted free PEG.
Size Exclusion ChromatographyAnalytical gel filtration analysis of the multimerized and PEGylated antibody fragments was performed with an ÄKTAexplorer chromatography system (GE Healthcare, Little Chalfont, Buckinghamshire, UK) at 4 °C and a flow rate of 0.5 ml/min, using a Superdex-200 column (24-ml bed volume). The column was equilibrated with filtered and degassed phosphate-buffered saline (PBS), containing 1 M NaCl and 0.05% Tween-20. For calibration, five protein standards were used:
-amylase (
-Amyl, 200 kDa), alcohol dehydrogenase (ADH, 150 kDa), bovine serum albumin (BSA, 66 kDa), carbonic anhydrase (CA, 29 kDa) and cytochrome c (Cyt c, 12.5 kDa). The exclusion volume of this Superdex-200 column was experimentally determined as 8 ml by injection of dextran blue (
2000 kDa). Samples of the different antibody formats were injected at concentrations between 500 µg/ml and 1.2 mg/ml in a volume of 100 µl. The absorption was recorded at 280, 260, and 230 nm. If impurities or a low PEGylation yield (less than 80%) were detected, preparative size exclusion chromatography under the same conditions was used as an additional purification step.
His Tag-specific 99mTc Labeling of the Miniantibodies The radioactive labeling of the 4D5 miniantibodies with 99mTc(CO)3 was performed essentially as described before (56). All constructs were rebuffered with 0.5 M MES, pH 6.5 and concentrated to
0.7-1.3 mg/ml. In the labeling reaction they were mixed with freshly prepared 99mTc(CO)3 (56, 59) at a ratio of 2:1 (v/v) and incubated at 37 °C for 90 min. The degree of incorporation was checked by gel filtration analysis on a Sephadex G-25 fast desalting column (HiLoad system, GE Healthcare) connected to a HPLC radioactivity monitor (LB 508, Berthold). Unreacted free 99mTc(CO)3 was removed by desalting, using a Biospin-6 column (BioRAD), equilibrated with PBS. The eluted protein samples were quantified for the total amount of incorporated radioactivity by
-scintillation counting.
Radioimmunoassay (RIA) on Human SK-OV-3 Tumor Cells The functional affinities of the various 4D5 miniantibodies to the HER-2-overexpressing tumor cells SK-OV-3 were determined by RIA. RIAs were performed essentially as described (35), with the following modifications: stock solutions of the 99mTc(CO)3-labeled antibody constructs were prepared at 10 different concentrations by 2-fold serial dilution. A 20-µl aliquot of each of these stock solutions was then incubated with 100 µl of an SK-OV-3 cell suspension (corresponding to 5 x 105 cells in PBS, containing 0.5% BSA and 0.005% Tween-20) for 1 h at 4 °Con a shaker. Final concentrations of active radiolabeled miniantibodies (60) were between 0.5 nM and 1 µM. All measurements were performed in triplicates. The data obtained were fit with a 1:1 binding model, using the simplified equation y = ymax·x/(KD, app + x), where x is the total molar concentration of radiolabeled antibody, y is the radioactivity attributable to the molecules that bound to the cells, ymax is its plateau value, and KD, app is the apparent equilibrium dissociation constant.
Analysis of Binding Kinetics by BIAcore MeasurementsThe binding kinetics of the different 4D5 miniantibody formats were analyzed and compared by surface plasmon resonance measurements using a BIAcore 3000 instrument (Biacore AB, Uppsala, Sweden). A CM5-Sepharose chip was coated by standard amine coupling chemistry (61) with the recombinant extracellular domain (ECD) of the HER-2 antigen to a density of 400 RU. This rather low coating density was chosen to minimize mass transfer and rebinding effects, yet allowing residual multivalent binding to assess the functionality of the multivalent molecules. Measurements were carried out at 25 °C, using a flow rate of 30 µl/min with an association phase of 3 min after injection, followed by dissociation for 10 min. The miniantibodies were diluted in filtered and degassed HBS-EP running buffer (10 mM HEPES, pH 7.4, 150 mM NaCl, 3 mM EDTA, 0.005% Tween-20 (polyoxyethylene sorbitan monolaurate)) and injected at concentrations between 0.5 and 100 nM. For subtraction of bulk effects, caused by changes in the buffer composition or nonspecific binding, we performed double referencing (62). Therefore, all analyzed samples were additionally injected onto an uncoated reference surface, including a sample of the running buffer, which was also tested on the HER-2-coated flow cell. Data were evaluated with the BIAevaluation software (version 3.0), applying a simple 1:1 binding model. The obtained sensorgrams were fitted globally over the whole range of injected concentrations and simultaneously over the association and dissociation phase. For monomeric fragments, equilibrium dissociation constants can be calculated from the rate constants (KD = koff/kon), whereas for multimeric fragments no true dissociation constant can be calculated; only an apparent value of the functional affinity (avidity) can be approximated for the given surface, which can still serve for relative comparisons (16).
Determination of Thermal Stability in Human SerumThe stability of the various miniantibody formats in human serum at physiological temperature was tested in vitro, using two different methods. In both cases the antibody fragments were radioactively labeled with 99mTc(CO)3 before examination. First, we determined the amount of aggregation or degradation and the stability of the functional format by size exclusion chromatography, performed on a HiLoad system (GE Healthcare). We used a Superdex-200 column (HR 10/30, 24-ml bed volume), a flow rate of 0.5 ml/min, and PBS as running buffer, containing 1 M NaCl and 0.05% Tween-20. The protein samples were injected in a volume of 100 µl. After labeling of the miniantibodies, the samples were divided into three parts. One was diluted (1:10) in human serum and incubated for 18 to 24 h at 37 °C. The other two served as controls and were diluted (1:10) in PBS buffer. Out of these one sample was loaded onto the column for immediate analysis and the other one was kept at 4 °C for the same time period as the aliquot that had been incubated in human serum. The elution profiles of the injected protein samples were recorded by simultaneous measurement of the absorption at 280 nm and the radioactivity. Because the amount of total injected radioactivity differed from sample to sample, we normalized the detected radioactivity at the main peak of each run to 1. The percentage of injected radioactivity was calculated for each elution peak, using the software Winflow (Amersham Biosciences) and Excel (Microsoft).
In the second experiment, the immunoreactive fraction of the 4D5 miniantibodies was analyzed by equilibrium binding assays on SK-OV-3 tumor cells. For all 4D5 constructs the percentage of active molecules was determined before and after incubation in human serum for 18-24 h at 37 °C. The cell binding assays were performed essentially as described (60). Triplicate samples with increasing numbers of cells (0.25 to 5 x 106 cells in 100 µl of PBS containing 0.5% BSA) were mixed with constant amounts of 99mTc(CO)3-labeled miniantibodies (in 20 µl of PBS containing 0.5% BSA and 0.005% Tween-20). The final concentration of miniantibody molecules in these cell suspensions was
20 nM. The samples were incubated for 1 h at 4 °C on a shaker. Then, cells were washed three times with PBS containing 0.5% BSA and 0.005% Tween-20. The cell-bound radioactivity in the pellets was determined by
-scintillation counting. The data obtained were fit using a 1:1 binding model.
Biodistribution Studies of the 4D5 MiniantibodiesBiodistribution studies of the various miniantibody formats were performed in mice to analyze their tumor localization, blood persistence, and body clearance. Female 6-8 weeks old CD1 nu/nu mice (Charles River, Germany) were xenografted with human SK-OV-3 tumor cells, subcutaneously injected at the lateral flanks. The studies were started 10 days after tumor inoculation, when the tumors had reached a size of 7-30 mg.
In the first experiment all 5 different 4D5 miniantibodies were compared in parallel, determining their biodistribution at 1 h and 24 h after injection. Each mouse received intravenously (i.v.) a single dose of 23 µg of 99mTc(CO)3-labeled antibody fragments (
100 µCi/mouse), administered in 100 µl of PBS. Mice (n = 3 per time point/construct) were sacrificed after 1 h and 24 h, organs were removed and the accumulated radioactivity was measured in a
-scintillation counter. The determined radioactivity of each organ and time point was normalized to the percentage of injected dose per gram tissue (%ID/g). The total amount of injected radioactivity was arbitrarily set to 100%.
In the second biodistribution study, we focused on the PEGylated miniantibodies, using the unmodified scFv 4D5 as control. This experiment was performed essentially the same as described for the first experiment, but the change in organ distribution was followed over an extended time period. Here, mice received a single dose of 30 µg of 99mTc(CO)3-labeled miniantibodies each and were sacrificed at 1, 24, 48, and 66 h after injection. Because of the relatively short half-life of 99mTc (6 h), we used two different amounts of injected radioactivity, depending on the time point of the measurement. Mice, which were killed 1 h or 24 h after administration, received
25 µCi and those sacrificed after 48 or 66 h obtained
1 mCi.
| RESULTS |
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First, dimeric and tetrameric miniantibody variants of the scFv 4D5 were constructed by fusion of self-associating peptides to the C terminus of the scFv fragment (35, 63). As dimerization device we used the synthetic peptide dhlx (52), consisting of a helix-turn-helix motif, which forms an interdigitating dimer. For tetramerization, the multimerization peptide of the human tumor suppressor protein p53 was chosen. The tetramer assembles from two dimers that associate via hydrophobic interactions of
-helices and
-strands (15, 31, 53). In extending our previous studies (35). we have now stabilized the multimeric formats by introducing intermolecular disulfide bonds, leading to a covalent cross-link of the self-associating peptides. To determine suitable positions for the introduction of disulfide bonds we used geometric search criteria (see "Experimental Procedures") based on structural models of the multimerization domains (Fig. 1, B and C). In the dimerization domain dhlx, two suitable positions were found, Glu23 and Ile33, which could be replaced with cysteines (Fig. 1B) (numbering according to PDB file). In the tetramerization domain p53 three possible positions were determined: Phe328, pairing with Phe338 and Ala347, which is juxtaposed to the same residue of the symmetry-related peptide. Because the introduction of additional cysteines can decrease the expression yield of functional protein, which was already low in case of the tetrameric miniantibody 4D5-p53 (35), only one cysteine was introduced. To this end, we selected position Ala347, which is in the middle of the associating parallel
-helices. The paired
-strands, which form an antiparallel "elbow" structure, non-covalently hold the tetramer together (Fig. 1C).
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Expression and Purification of the 4D5 Antibody Constructs All antibody fragments were expressed in the periplasm of the E. coli strain SB536 (58) and purified by two subsequent affinity chromatography steps (see "Experimental Procedures" and supplementary materials). The purity of each construct was determined as greater than 90% by Coomassie-stained SDS-PAGE. After purification we routinely obtained yields of about 2-3 mg/liter E. coli culture of the unmodified scFv 4D5 as well as of the mutated scFv with a C-terminal cysteine, 4D5-Cys, and of the dimeric miniantibody with two cysteines in the multimerization domain, 4D5-dhlx-SS. The introduction of cysteines at these positions did not markedly decrease the expression yield. In contrast, we only obtained 500 µg/liter of the dimeric miniantibody fragment with C-terminal cysteines 4D5-dhlx-Cys under the same conditions. The yield of the tetrameric miniantibody with a disulfide bond in the tetramerization domain, 4D5-p53-SS, was only about 100 µg/l. The fact that the expression yield dropped with the introduction of additional cysteines is consistent with observations on other proteins (64-66). This is probably because of the strongly oxidizing environment in the periplasm, which may cause incorrect cross-links during folding resulting in protein precipitation (67).
Nevertheless, we chose periplasmic expression for all our constructs as the production method, since the yield was sufficient and we directly obtained active molecules (Table 3). The overall yield of active multimers was higher than by a production via inclusion bodies and refolding (data not shown). Furthermore, it should be noted that these volume yields were obtained in routine shake flasks and could potentially be greatly increased by fermentation (64).
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60 kDa) was observed, in addition to the main peak of the monomeric fraction (29 kDa). The formation of this dimer was concentration-dependent, and it was stable, once formed, even if the sample was highly diluted afterward. 4D5-dhlx-SS eluted in a single symmetric peak at a retention volume consistent with the dimeric format, confirming homogeneity of the protein preparation (Fig. 3B). The elution peak of the tetrameric antibody fragment 4D5-p53-SS was not exactly symmetric, but had a shoulder at a retention volume of a dimeric format (Fig. 3C). This indicates that a small proportion of the molecules multimerized only to the dimeric stage, but the main fraction was present in a tetrameric format with a size of 130 kDa.
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80-90%. Because the dimeric miniantibody gave rise to only one main band in the denaturing SDS-PAGE, corresponding to the PEGylated form, a major fraction of these dimers must have two PEG20 molecules attached, one on each subunit. The retention of the internal disulfide bonds in the VL and VH domains under the PEGylation conditions applied was verified by subjecting the unmodified scFv 4D5 to the same reaction procedure as described above. In this case, no attachment of the PEG polymer to the protein could be detected (data not shown). In the gel filtration analysis, both PEGylated miniantibody constructs eluted as symmetric peaks without showing high molecular weight aggregates and only a minor fraction of non-PEGylated molecules (Fig. 3, D and E). The small height of these minor peaks in comparison to the main peak of PEGylated proteins is in agreement with the high PEGylation yield determined in the SDS-PAGE analysis. As observed for the unmodified monomeric scFv 4D5, the scFv 4D5-PEG20 also appears to dimerize to a small extent when it is highly concentrated. The elution peak of the PEGylated monomer had a small shoulder at the same retention volume as the PEGylated dimer 4D5-dhlx-PEG20.
When comparing the behavior of the PEGylated proteins with that of the non-conjugated antibody fragments by gel filtration, it became apparent that the PEGylated constructs eluted at a retention volume corresponding to a size of 200-300 kDa, which is not consistent with the calculated molecular weight (50 kDa for the monomer-PEG20 and 106 kDa for the dimer-PEG20). We could confirm the theoretical molecular mass of about 50 kDa at least for the monomer-PEG20 construct by multi-angle static light scattering (MALS), performed online during the gel filtration runs (55). This behavior of PEG in gel filtration is in agreement with the findings of other groups (49, 50, 68, 69). It demonstrates the strong effect of the 20-kDa PEG-tail on the diffusion behavior of the conjugated protein, enlarging its hydrodynamic radius far beyond that expected from the increase in molecular weight.
To verify this conclusion and to exclude any interference of the column material, we also examined the different antibody formats in solution by dynamic light scattering (DLS). Based on the diffusion coefficients determined (55), the apparent molecular weights of the constructs, when treated as globular proteins, were calculated. The diffusion coefficients of the PEGylated antibody fragments corresponded to sizes of 133 and 309 kDa, respectively. These values are clearly above their actual molecular mass and consistent with the results of the gel filtration analysis.
RIA Measurements of Functional Affinities on SK-OV-3 Tumor CellsMultimerization and PEGylation are modifications, which can affect the functional affinity of antibodies to cell surface antigens. By multimerization, the valency of the antibody fragment is increased, in principle allowing it to bind to more than one antigen molecule simultaneously. By attachment of a 20-kDa polyethylene glycol moiety, a highly flexible, bulky residue with a long reach was added to the protein. This PEG-tail can dynamically interfere with the antigen-antibody binding interaction, and in addition, upon binding, block the binding to a neighboring antigen (55).
To analyze if and to what degree the functional affinities of the 4D5 miniantibodies were altered by these modifications, we performed equilibrium binding measurements on HER-2-overexpressing SK-OV-3 tumor cells by RIA. As a reference molecule, the unmodified scFv 4D5 was used. For all constructs we determined functional affinities in the nanomolar range (Table 1). This is in agreement with earlier results of RIA measurements, which were performed with our first generation of 4D5-miniantibodies, lacking the disulfide bridges between the multimerization domains (35). As expected, we found an increase in functional affinity for the di- and tetrameric miniantibodies 4D5-dhlx-SS and 4D5-p53-SS in comparison to the monomeric scFv fragment.
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Comparison of Binding Kinetics by Surface Plasmon ResonanceTo investigate the effect of multimerization and PEGylation on the apparent affinity of the 4D5 antibody fragments in more depth, we compared the binding kinetics of the five different antibody constructs by surface plasmon resonance. The association and dissociation rates were separately analyzed using a BIAcore 3000 instrument. The antigen was coated on a CM5 chip at a density of 400 RU. This coating density was chosen because it is relatively low, allowing to minimize mass transport effects and rebinding of fully dissociated molecules, which both could compromise the measured kinetics. On the other hand, this coating density is still sufficient to enable some multivalent binding, required to verify the functionality of the multivalent constructs. Measurements were performed at a high flow rate of 30 µl/min to minimize rebinding, using analyte concentrations from 0.5 to 100 nM. The kon, koff, and apparent KD values determined are listed in Table 2. It is important to note that these values can only be used for relative comparisons, as they have been approximated from a 1:1 model, which only holds true for the monovalent species. For the multivalent species only apparent values of functional affinities or avidities (valid for the particular immobilization density used) can be deduced. However, because of the very slow dissociation rate, deviations from a 1:1 model are not apparent from the quality of the fit of the multivalent species (55).
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For the PEGylated constructs we determined apparent KD values of 800 pM (monomeric scFv 4D5-PEG20), and 130 pM (bivalent dimer 4D5-dhlx-PEG20). These values indicate each about a 5-fold lower functional affinity than the corresponding constructs without a PEG-tail, measured on the same surface. Separate analysis of the association and dissociation kinetics revealed that the reduction in functional affinity, caused by PEGylation of the antibody fragments, was due almost exclusively to a slower on-rate (Table 2), while the off-rate remained essentially unchanged.
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Thermal Stability in Human SerumA prerequisite for efficient tumor localization of antibodies is their high stability in serum at physiological temperature. To address this issue we examined the stability of the different 4D5 miniantibody formats upon incubation in human serum at 37 °C and measured their aggregation and degradation behavior as well as their antigen binding activity. For this purpose, the antibody constructs were labeled with 99mTc(CO)3 and analyzed before and after serum incubation for 18-24 h by size exclusion chromatography and binding assays on HER-2 overexpressing tumor cells.
In the gel filtration analysis the elution profiles of freshly labeled miniantibodies were compared with aliquots that had been incubated in serum at 37 °C or in PBS at 4 °C (Fig. 4). For all five constructs we found that the main portion of injected molecules still eluted at the same peak volume after serum incubation as observed before this treatment. Only in case of the monomeric scFv 4D5 and the tetramer 4D5-p53-SS a small fraction of oligomerized or aggregated molecules was detected after serum incubation. The elution profiles of the PEGylated constructs showed, in addition to their main elution peak, small peaks at about the same retention time (30-35 min) as the non-PEGylated scFv fragments. However, we do not know the true identity of these minor peaks, and they may contain some material which was never PEGylated or might have resulted from minor proteolytic activity in the sample. The percentage of molecules that retained their initial format upon serum incubation at 37 °C for 24 h was determined as 65% for the monomer, 85% for the dimer, 48% for the tetramer, 66% for the PEGylated monomer and 81% for the PEGylated dimer. Overall, the elution profiles obtained indicate that each of the different antibody formats has sufficient stability in human serum at 37 °C for at least 24 h.
To determine the immunoreactivity of the 4D5 miniantibodies on SK-OV-3 tumor cells before and after serum incubation, cell binding assays with increasing numbers of cells were performed (60). Only a small decrease in binding activity (by 0-20%) was found over time for all constructs. Combining the initial percentage of active molecules with this decline, a remaining fraction of 69-91% immunoreactive antibody molecules (Table 3) were obtained after serum incubation. This finding supports the conclusion that the high serum stability of the 4D5 scFv could be retained in the multimerized and PEGylated formats.
Blood Clearance and Tumor LocalizationThe different miniantibody formats were generated to investigate the effects of changes in size and functional affinity on systemic clearance and tumor localization. Biodistribution studies were performed in mice bearing subcutaneously growing SK-OV-3 tumor xenografts.
In a first experiment, all five different constructs were compared in parallel by measuring their biodistribution 1 h and 24 h after injection (Table 4 and Fig. 5). The first aim of this experiment was to clarify whether the insertion of disulfide bonds into the multimerization domains of the dimeric and tetrameric antibody fragments would influence in vivo stability, compared with the constructs without a covalent bond (35). The second aim was to assess the effect of PEGylation on serum half-life and tissue distribution. The unmodified monomeric scFv 4D5 localized at the tumor site with 1.77% ID/g and a tumor-to-blood ratio of 9.3 after 24 h. These data are in the same range as those reported in previous targeting studies using this scFv in the same tumor model (35, 56). For the dimeric miniantibody 4D5-dhlx-SS we measured a tumor accumulation of 2.1% ID/g with a tumor-to-blood ratio of 7.8, 24 h after injection. At this time point, the tetrameric miniantibody 4D5-p53-SS showed a tumor localization of 2.84% ID/g and a tumor-to-blood ratio of 3.84. When comparing the total dose accumulation of these three miniantibodies, we found a moderate increase in tumor localization with increasing degree of multimerization. These data are qualitatively and quantitatively consistent with the results of a previous targeting study, performed with dimeric and tetrameric antibody fragments of the same format but lacking disulfide bonds in their multimerization domains (35). The covalent linkage of the multimerization domains neither improved the tumor accumulation of the miniantibodies nor did it alter their blood clearance. Therefore, the fact that tumor enrichment of these multimeric miniantibodies remains relatively modest, despite their high functional affinity, cannot be explained by partial dissociation of their subunits.
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Because the blood concentration of the PEGylated antibody fragments was still high after 24 h, especially in case of the dimer 4D5-dhlx-PEG20, we decided to perform a second extended biodistribution study. Here, we analyzed the change in organ distribution of the PEGylated molecules over time by taking blood, tumor and organ samples 1, 24, 48, and 66 h after injection (Table 5 and Fig. 6). Unmodified scFv 4D5 was used as reference. The PEGylated monomer reached its highest tumor accumulation between 24 and 48 h after injection with 9.28% ID/g (24 h) and 8.74% ID/g (48 h). After 66 h still 4.85% ID/g were present at the tumor with a tumor-to-blood ratio of 10.3, indicating stable antigen binding and retention in the tumor tissue. At 24 h after injection the PEGylated dimer still had a tumor-to-blood ratio of 1 and a total dose enrichment comparable to the monomer-PEG20. It reached its highest tumor accumulation not before 48 h after injection, showing 15% ID/g with a tumor-to-blood ratio of 2.53. However, after 66 h only 5.2% ID/g were still retained in the tumor tissue, which is almost equivalent to the value of the monomer-PEG20 at this time point. Compared with the unmodified scFv 4D5, both PEGylated constructs achieved a distinctly increased tumor enrichment of 5.5-fold (24 h after injection). After 48 h, the difference was even stronger with an 8.5-fold (monomer-PEG20) and 14-fold (dimer-PEG20) higher tumor accumulation, respectively, compared with the scFv.
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| DISCUSSION |
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Molecular DesignIn the first approach, dimeric and tetrameric miniantibody variants of the 4D5 scFv were generated by fusion of self-associating peptides to the C terminus of the antibody fragment (35). This enabled the spontaneous assembly of the subunits already during their expression, directly in the periplasm of E. coli. To further stabilize the multimeric formats, in an extension of our previous studies (35), we now introduced intermolecular disulfide bridges to covalently link these self-associating domains. The covalent linkage of the subunits should prevent their dissociation at high dilution over time, which otherwise might occur, when the miniantibodies are injected into the blood stream. By multimerization we not only increased the size of the 4D5 antibody fragment, but in addition its valency from a mono- to a di-up to a tetravalent construct.
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Molecular CharacterizationThe molecular characterization of the miniantibodies showed that they all could be produced in functional form and at the expected molecular composition and assembly (Figs. 2 and 3). Whereas we could not directly prove the presence of two PEG molecules on the dimer 4D5-dhlx-PEG20, the high yield of 80-90% PEGylated subunits, detected by SDS-PAGE, indicate that at least the major fraction carried a PEG-tail at both C termini. The gel filtration analysis together with dynamic light scattering (55) also revealed the strong effect of the flexible and hydrophilic PEG-tail on the hydrodynamic properties of the antibody fragments, which showed a diffusion behavior comparable to molecules with a mass of
200 kDa. This finding is in agreement with results from other groups (49, 50, 55, 68, 69).
Functional AffinitiesMultimerization and PEGylation are both modifications that can alter the functional affinity of antibodies to cell surface antigens. Thus, we compared the binding behavior of the various 4D5 miniantibody formats using kinetic BIAcore measurements as well as equilibrium binding assays on human SK-OV-3 tumor cells overexpressing HER-2. On the tumor cells, all constructs showed functional affinities in the nanomolar range (Table 1), consistent with previous observations (35). In the BIAcore measurements, however, we determined functional affinities in the picomolar range (Table 2). To explain this discrepancy, one has to consider that the binding site of the antibody 4D5 is located in domain IV of the extracellular region of HER-2, which is adjacent to the transmembrane region (44) and involved in HER-2 dimerization. Thus, antibody binding to intact cells may be limited by partial inaccessibility of the target epitope. In the BIAcore measurements, however, only the extracellular domain of HER-2 was used, immobilized by its lysine residues in various positions and in random orientation.
As expected and observed in previous studies with non-covalently linked miniantibody formats (35), we found an increase in avidity by multimerization (Table 1). The magnitude of this avidity gain depends on the epitope density on the cell surface and other geometric parameters (16). PEGylation, on the other hand, led to a decrease in functional affinities of about 5-fold, both for the monomeric and the dimeric molecules, even though the attachment of the PEG-tail was site-specific at the C terminus of the proteins, most distal to the antigen binding sites. The 5-fold reduction in apparent affinity upon PEGylation of the antibody fragments was observed in the kinetic BIA-core measurements (Table 2) as well as in the equilibrium binding assays on SK-OV-3 tumor cells (Table 1). In earlier reports (69, 71, 72) it was stated that antibody conjugates with a PEG polymer attached at a single engineered cysteine distal to the antigen binding site retain full binding activity. In a more recent study (50), however, similar findings of reduced affinity as we have demonstrated here were also reported for other scFv fragments that were site-specifically conjugated with PEG polymers of different sizes.
Separate analysis of the association and dissociation kinetics revealed that the effect of PEGylation on the apparent affinity is exclusively due to decreased on-rates, while the off-rates of the scFv or the bivalent miniantibodies barely changed upon PEGylation (Table 2). We recently investigated the reason for the decreased on-rates by experimental and computational analyses (55). A mathematical model accounting both for intra- and intermolecular blocking of the PEG-tail can robustly explain the observed binding kinetics. Briefly, careful controls could exclude that PEGylation might cause a significant percentage of permanently inactivated molecules. Rather, the flexible and bulky PEG-tail can transiently block the binding site of the antibody, decreasing the fraction of active molecules available at any given time point (intramolecular blocking). In addition, once the antibody has bound to a surface antigen (either on the cell or on a BIAcore chip), PEG may block the binding to additional neighboring antigens (intermolecular blocking). The model predicts that in solution more than 90% of the PEGylated antibodies are transiently blocked, but all molecules are intrinsically available for binding, since molecules that have bound to the target are replenished by rapid equilibration of blocked and unblocked antibodies. The model further predicts that the quantitative effect on the on-rate (and thus on affinity, as the off-rate is unchanged) is a function of antigen density on the surface (affecting intermolecular blocking) and PEG chain size (affecting both intermolecular and intramolecular blocking) (55).
StabilityApart from a high functional affinity to the target, stability at physiological temperature and resistance to serum proteases are also crucial for effective tumor localization and retention (34). We examined the thermal stability of the different antibody constructs upon incubation in human serum at 37 °C, using gel filtration analysis as well as cell binding assays on SK-OV-3 tumor cells. We found that exposure to serum at 37 °C did not markedly change the molecular characteristics of the different antibody formats within 24 h (Fig. 4), nor did it significantly decrease their binding activity (Table 3). These results demonstrate that all 4D5 miniantibodies fulfilled the stability requirements for tumor targeting.
Tumor TargetingThe tumor targeting properties of the various 4D5 miniantibodies were analyzed in mice xenografted with human SK-OV-3 tumors. Comparing the total dose accumulation of the non-PEGylated miniantibodies, we found a moderate increase in tumor localization with increasing degree of multimerization (Table 4). These constructs showed biodistributions similar to those determined for the corresponding 4D5 miniantibodies lacking disulfide bonds between their multimerization domains (35). The covalent linkage of the multimerization domains thus did not significantly increase the serum half-life and tumor localization of the dimeric and tetrameric antibody fragments. Therefore, a potential slow dissociation of the non-disulfide-linked subunits upon the dilution that occurs after injection into the blood stream does not seem to be a major factor influencing their pharmacokinetics.
Our data (Table 4) suggest that at least the dimer 4D5-dhlx-SS is cleared by renal filtration, resulting in its rapid elimination leading in turn to reduced serum concentrations. In addition, it is likely that the multimeric proteins were more efficiently removed by macrophages, because the radioactivity associated with spleen and liver was higher than for the monomeric scFv.
Improved tumor localization has also been reported for other multimeric antibody formats (22, 23, 27, 29, 30, 36, 73) compared with their monomeric counterparts, although the use of different labeling methods, antigens and tumor types essentially precludes the direct and quantitative comparison of the data. However, what is fairly comparable to our finding is the biodistribution study of the 4D5 barnase-barstar miniantibodies (33), which only varies from our studies in the oligomerization modules used. A major difference is that because of the size of the barnase-barstar dimerization domains, the molecular weight of the whole complex is significantly larger. The favorable tumor localization of these constructs suggests that the apparent size of the molecules is a major determinant in tumor targeting, consistent with the results from PEGylation.
Although PEGylation decreased the binding affinity of the 4D5 miniantibodies, we found a clear increase in tumor accumulation (Table 5 and Figs. 5 and 6). Forty-eight hours after injection an increase in total dose accumulation of 8.5-fold for the PEGylated monomer and 14.5-fold for the PEGylated dimer was determined, each compared with the unmodified scFv at this time point. It appears that the increase in size by PEGylation had a stronger effect on tumor accumulation of the 4D5 miniantibodies than the decrease in functional affinity, which was always in the low nanomolar range. According to the tumor-to-blood ratios determined, the higher tumor enrichment seems to be mainly caused by prolonged serum half-life of the PEGylated miniantibodies. Because of the extended serum half-life and despite the high tumor accumulation, they had significantly lower tumor-to-blood ratios at earlier time points (1-24 h after injection) than the miniantibodies without a PEG-tail. Their concentration in the circulation decreased continuously but more slowly, reaching optimal tumor localization only after about 48 h. At this time point, tumor/blood ratios were >2.5. The fact that their total dose at the tumor steadily increased during the first 24-48 h indicates stable antigen binding in the tumor tissue.
Clearance MechanismsOne reason for the prolonged serum half-life of the PEGylated miniantibodies is probably their reduced renal filtration. As shown by gel filtration analyses, the PEG moiety leads to a significant increase in hydrodynamic size of the conjugated antibody fragments, far beyond the added molecular mass, so that the resulting molecules correspond to globular proteins of
200 kDa. The tissue penetration of the miniantibodies may also be reduced by this property. Decreased extravasation into the surrounding tissue can be an additional cause of the elevated serum half-lives. Moreover, the PEG moiety may help protecting the miniantibodies from clearance by cells of the immune and reticuloendothelial system.
The higher hydrodynamic radius is reflected in lower values of kidney accumulation, which were reduced to half of that of the scFv for the scFv-PEG20 construct and to only a quarter in case of the dimeric miniantibody 4D5-dhlx-PEG20 (Table 5) (35). The observed level of radioactivity in the kidney depends on three components, the efficiency of glomerular filtration (17, 18), reabsorption of the filtered protein in the proximal tubules (74, 75), and the retention of the radioactive label in kidney cells following protein endocytosis (76, 77).
We believe that the observed relatively high kidney values are mainly caused by the high stability of the 99mTc-label at the His tag of the proteins (56). This Tc(I) peptide complex may be unable to be transported back to the blood circulation after endocytosis and catabolism of the protein in the tubulus epithelium. Nevertheless, in contrast to other labeling methods, such as iodination, Tc(I) labeling allows a direct comparison of cellular uptake, because it more faithfully records the history of distribution of a protein. The observation that the scFv 4D5 showed an apparently reduced kidney localization when labeled with 125I (56), which can be removed by dehalogenases (56, 76-78), supports this conclusion.
Besides the kidneys, the liver is a main elimination organ, usually responsible for unspecific uptake and degradation of proteins larger than 60 kDa (33, 79). Hepatic clearance appears to be responsible for elimination of the tetramer 4D5-p53-SS, when comparing its liver uptake to that of the monomeric scFv 4D5 (Table 4). On the other hand, PEGylation did not result in a significant increase in liver uptake of the antibody fragments (Tables 4 and 5). One explanation could be that the flexible PEG moiety at least partially masks the protein and its charge, thereby reducing the rate of cellular uptake. Alternatively, the PEGylated proteins may become rapidly excreted into the bile upon processing in hepatocytes and therefore do not accumulate (79).
Tumor Targeting in Comparison with other Antibody ConstructsAs pointed out above, it is difficult, if not impossible, to compare tumor targeting behavior between different studies, because of the differences in models used and in experimental details. Nevertheless, we can compare trends seen within ours and other studies. Adams et al. (38) recently studied monomeric and dimeric scFv constructs with a C-terminal cysteine. They found a 2.5-fold increase in tumor retention when going from a monomer to a dimer and showed that this is not a MW effect but is caused by bivalent binding. In our study, the effect on tumor retention was somewhat smaller when going from the monomer to the dimer, presumably since the monomeric scFv already has a higher affinity. The in vivo effect of avidity will also depend on the relative position of the neighboring epitopes and the internalization of the label. The MW effect is strongly visible only at the much higher apparent molecular size caused by the addition of a PEG molecule (Tables 4 and 5). If dimerization is achieved via a bigger domain, such as a CH3 domain (80) or a barnase-barstar pair (33), accumulation may be slightly above those with a small bivalent construct, but blood clearance is slightly slower as well. Anti-HER-2 scFvs have also been fused to the whole Fc part (39), and while anti-tumor activity was found, tumor accumulation has not been measured yet. Similarly, very large multivalent anti-HER-2 constructs have been made from Fab fragments fused in tandem (via linkers connecting the heavy chains) (40), and while their long serum half-lives have been demonstrated, their tumor accumulation was also not quantitatively assessed.
Beside quantitative tumor accumulation, immunogenicity of the antibody constructs is an important factor, determining their therapeutic applicability and efficacy. For any constructs, the ones described in the present study and others that contain artificial linker modules, potential immunogenicity is an issue. In addition, potential immunogenicity may arise from effector domains, and even fully human antibodies can elicit an immune response (81). However, the immunogenicity of protein therapeutics and their impact on anti-tumor efficacy can probably ultimately only be determined in clinical trials.
| CONCLUSIONS |
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| FOOTNOTES |
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The on-line version of this article (available at http://www.jbc.org) contains supplementary methods. ![]()
1 Present address: Kinderspital Zürich, Abteilung für Infektions- & Krebskrankheiten, August-Forel-Str. 1, CH-8008 Zürich, Switzerland. ![]()
2 Present address: Inst. of Pharmacology and Toxicology, University of Zürich, CH-8057 Zürich, Switzerland. ![]()
3 Present address: Dept. of Biochemistry, University of Zürich, CH-8057 Zürich, and Dept. of Pharmacology, University of Bern, Friedbühlstr. 49, CH-3010 Bern, Switzerland. ![]()
4 To whom correspondence should be addressed: Dept. of Biochemistry, University of Zürich, CH-8057 Zürich, Switzerland. Tel.: 41-44-635-5570; Fax: 41-44-635-5712; E-mail: plueckthun{at}bioc.unizh.ch.
5 The abbreviations used are: CEA, carcinoembryonic antigen; 99mTcCO3, [99mTc(OH2)3(CO)3]+; % ID/g, percent injected dose per gram tissue; BSA, bovine serum albumin; DLS, dynamic light scattering; ECD, extracellular domain; MALS, multi-angle light scattering; NTA, nitrilotriacetic acid; PBS,phosphate-buffered saline; PDB, Protein Data Bank; PEG, polyethylene glycol; RIA, radioimmunoassay; RU, resonance units; scFv, single chain Fv fragment; MES, 4-morpholineethanesulfonic acid. ![]()
| ACKNOWLEDGMENTS |
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