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Originally published In Press as doi:10.1074/jbc.M611911200 on February 12, 2007

J. Biol. Chem., Vol. 282, Issue 16, 11687-11695, April 20, 2007
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Protein Kinase A Suppresses Sterol Regulatory Element-binding Protein-1C Expression via Phosphorylation of Liver X Receptor in the Liver*

Takashi Yamamoto{ddagger}, Hitoshi Shimano{ddagger}§1, Noriyuki Inoue{ddagger}, Yoshimi Nakagawa{ddagger}§, Takashi Matsuzaka{ddagger}§, Akimitsu Takahashi{ddagger}§, Naoya Yahagi§, Hirohito Sone{ddagger}§, Hiroaki Suzuki{ddagger}, Hideo Toyoshima{ddagger}, and Nobuhiro Yamada{ddagger}

From the {ddagger}Department of Internal Medicine, Metabolism and Endocrinology, Graduate School of Comprehensive Human Sciences and §Center for Tsukuba Advanced Research Alliance, University of Tsukuba, 1-1-1 Tennodai, Tsukuba, Ibaraki 305-8575, Japan

Received for publication, December 29, 2006


    ABSTRACT
 TOP
 ABSTRACT
 INTRODUCTION
 EXPERIMENTAL PROCEDURES
 RESULTS
 DISCUSSION
 REFERENCES
 
Sterol regulatory element-binding protein (SREBP)-1c is a transcription factor that controls synthesis of fatty acids and triglycerides in the liver and is highly regulated by nutrition and hormones. In the current studies we show that protein kinase A (PKA), a mediator of glucagon/cAMP, a fasting signaling, suppresses SREBP-1c by modulating the activity of liver X receptor {alpha} (LXR{alpha}), a dominant activator of SREBP-1c expression. Activation of PKA repressed LXR-induced SREBP-1c expression both in rat primary hepatocytes and mouse livers. Promoter analyses revealed that the LXR{alpha}-binding site in the SREBP-1c promoter is responsible for PKA inhibitory effect on SREBP-1c transcription. In vitro and in vivo PKA directly phosphorylated LXR{alpha}, and the two consensus PKA target sites (195, 196 serines and 290, 291 serines) in its ligand binding/heterodimerization domain were crucial for the inhibition of LXR signaling. PKA phosphorylation of LXR{alpha} caused impaired DNA binding activity by preventing LXR{alpha}/RXR dimerization and decreased its transcription activity by inhibiting recruitment of coactivator SCR-1 and enhancing recruitment of corepressor NcoR1. These results indicate that LXR{alpha} is regulated not only by oxysterol derivatives but also by PKA-mediated phosphorylation, which suggests that nutritional regulation of SREBP-1c and lipogenesis could be regulated at least partially through modulation of LXR.


    INTRODUCTION
 TOP
 ABSTRACT
 INTRODUCTION
 EXPERIMENTAL PROCEDURES
 RESULTS
 DISCUSSION
 REFERENCES
 
In mammals, carbohydrates are an essential energy resource. When consumed in excess, carbohydrates are converted to lipids by lipogenic enzymes in preparation for times of energy deficiency. These processes are known to be regulated at the transcription level, and several different transcription factors are known to contribute to this regulation. Sterol regulatory element-binding protein (SREBP),2 a transcription factor belonging to the basic helix-loop-helix-leucine zipper family, regulates triglyceride synthesis and cholesterol metabolism (1). Three different SREBP isoforms have been identified. SREBP-1c plays a role primarily in triglyceride synthesis (2), whereas SREBP-2 regulates cholesterol metabolism (3). SREBP-1a is expressed in growing cells and activates an entire array of genes involved in both triglyceride and cholesterol synthesis (4). In liver SREBP-1c controls transcription of genes involved in fatty acid and triglyceride synthesis (2, 5). SREBP-1c expression is highly regulated in response to the nutritional condition. Expression of SREBP-1c is undetectable during fasting, whereas its expression is strongly induced in a fed state followed by similar adapted nutritional changes in lipogenic genes (6).

To understand the molecular mechanism of nutritional regulation of SREBP-1c expression, the SREBP-1c gene promoter has been extensively studied. In the proximal region of the mouse SREBP-1c promoter, Sp1, NF-Y, USF, SREBP, and LXR-binding sites have been identified (79). It has been observed that insulin (10) and glucose (11, 12) are factors that induce hepatic SREBP-1c in vivo and in vitro, although precise mechanisms are yet to be elucidated. Adenoviral overexpression in rat primary hepatocytes suggested that the signal transducer, Akt, could be a potential regulator of SREBP-1c transcription (13).

Liver X receptors (LXR) belong to a nuclear receptor superfamily. The LXR subfamily consists of two members, LXR{alpha} and LXRbeta, which are activated by oxysterols (14). The expression pattern of LXR{alpha} is restricted mainly to liver, adipocytes, small intestine, and macrophages, whereas LXRbeta is expressed ubiquitously. Although early reports revealed involvement of LXRs in cholesterol homeostasis (15, 16), recent studies suggest that LXR negatively regulates gluconeogenesis (17) and inflammatory responses (18, 19). While investigating the pharmacological effect of LXR in rodent models, it has been observed that LXR ligands are protective against the development of atherosclerotic lesions (20) and ameliorates conditions of high blood glucose and impaired glucose tolerance (21). LXRs directly bind the cis element on the SREBP-1c promoter as heterodimers with RXR, leading to transcriptional activation (8). Several studies have established LXRs as dominant activators of SREBP-1c expression. LXR{alpha}/beta double knock-out mice revealed dramatically reduced expression of SREBP-1c (9). We have used an expression cloning strategy to show that LXRs are the primary activators of the SREBP-1c promoter (8). Polyunsaturated fatty acids are the only known dietary lipid capable of negatively regulating hepatic SREBP-1c expression and lipogenesis (22). A portion of these effects is mediated at the transcriptional level through repression of LXR activity (23).

Considering that hepatic SREBP-1c expression is dominated by LXRs and eliminated by fasting, it is probable that there is a mechanism by which LXR mediates the repressed SREBP-1c expression during fasting. Consistently, it has been reported that glucagons and its signal mediator, cAMP, suppresses SREBP-1c in rat primary hepatocytes (24). Protein kinase A (PKA) is a cAMP-dependent protein kinase that consists of both a catalytic and regulatory subunit and regulates numerous cellular functions in eukaryotic cells by phosphorylating target proteins. In regard to energy metabolism, PKA is subordinated to glucagon and adrenalin and, therefore, is classically recognized as a fasting signal to activate gluconeogenesis and beta-oxidation and to oppose triglycerides synthesis and glucose utilization. It is known that several nuclear receptors (e.g. estrogen receptor, retinoic acid receptor, peroxisome proliferator-activated receptor, and hepatocyte nuclear factor-4{alpha}) are phosphorylated by PKA leading to modification of their trans activities via diverse mechanism (2528). In the current study we investigated effects of cAMP/PKA on the SREBP-1c expression and LXR signaling system.


    EXPERIMENTAL PROCEDURES
 TOP
 ABSTRACT
 INTRODUCTION
 EXPERIMENTAL PROCEDURES
 RESULTS
 DISCUSSION
 REFERENCES
 
Materials—Anti-LXR{alpha}, anti-RXR, and anti-SREBP-1 antibodies were purchased from Santa Cruz Biotechnology Inc. (Santa Cruz, CA). Anti-CREB and anti-phospho-CREB (Ser-133) antibodies were purchased from Cell Signaling Technology Inc. (Beverly, MA). Anti-His 5 antibody was purchased from Qiagen Inc. Anti-HA and anti-Myc antibodies were purchased from Roche Applied Science. Anti-FLAG antibody was purchased from Promega (Madison, WI). Dibutyryl-cAMP was purchased from Promega. T0901317 as synthetic LXR ligand was purchased from WAKO.

Animals—Male mice (C57BL/6J) were obtained from CLEA Japan (Tokyo, Japan). For fasting and refeeding, mice were fasted for 24 h and then fed a high sucrose/low fat diet for 12 h.

Isolation and Culture of Hepatocytes—Primary hepatocytes were isolated form male Sprague-Dawley rats (200–300 g) (CLEA Japan). Cell were resuspended in Dulbecco's modified Eagle's medium containing penicillin and streptomycin supplemented with 10% fetal bovine serum before being seeded on 100-mm collagen-coated dishes at 2 x 106 cells/dish. After incubation for 4 h to allow attachment, medium was replaced, and experiments were performed.

Northern Blotting—Total RNA from mouse liver and rat primary hepatocytes was isolated as described previously (29). The cDNA probes for mouse SREBP-1, phosphoenolpyruvate carboxykinase, acidic ribosomal phosphoprotein PO (36B4), ABCA1, and LXR{alpha} were prepared as previously described (8, 29, 30).

Plasmids—A series of mouse SREBP-1c promoter linked to pGL2 basic were previously described (7). LXRE-enhancer construct linked to pGL2 promoter vector was previously described (8). Human ABCA1 promoter (–919 to +239) linked to pGL3 basic were previously described (30). Expression vector for Gal4-DBD-LXR{alpha} ligand binding domain (LBD) fusion protein and Gal4 RE Luc vector were previously described (8). Expression vectors for mouse LXR{alpha} (wild type, 195A 196A and 290A 291A) were constructed in pcDNA3.1(+). Expression vector for PKA c subunit was constructed in pFA. Expression vector for V5-tagged PKA regulatory subunit (dominant negative form) was constructed in pcDNA3.1(–) according to a previous report for the mutated form of the regulatory type 1 subunit of PKA (31). The expression vector for HA-tagged human LXR{alpha} was constructed in pcDNA3. Expression vectors for FLAG-tagged wild type human RXR and FLAG-tagged mutant RXR in which the serine 27 residue was substituted to alanine were constructed in pcDNA3.1(+). Expression vectors for histidine-tagged recombinant mouse LXR{alpha} (full-length, amino acids 1–163, 162–326, and 325–445) were constructed in pET28a(+). The expression vector for glutathione S-transferase fusion protein was constructed in pGEX4T-2. For the mammalian two-hybrid system, the mouse LXR{alpha}-coding region was ligated into pACT. Mouse SRC-1 nuclear receptor interaction domain (amino acids 568–779) and mouse NcoR1 nuclear receptor interaction domain (amino acids 1944–2453) were ligated into pM. For in vitro translation, SRC-1 nuclear receptor interaction domain (NID; amino acids 576–779) was ligated into pcDNA3.1(+). The expression vector for FLAG-tagged CBP was previously described. The expression vector for HA-tagged mouse CREB was constructed in pcDNA3.

Transfections and Luciferase Assay—293 cells and 293T cells were grown in Dulbecco's modified Eagle's medium containing penicillin and streptomycin supplemented with 10% fetal bovine serum at 37 °C in 24-well plate overnight before transfection. Cells were transfected with reporter vector, expression vector using FuGENE 6. Total amounts of DNA were adjusted to 0.5 µg/well using empty vector. After 24 h of incubation, the amounts of firefly luciferase activity in transfectants were measured. Firefly luciferase activity was normalized by the amounts of Renilla luciferase activity expressed from CMV or SV40 promoter linked-Renilla luciferase unless otherwise indicated.

In Vitro Kinase Assay—Histidine-tagged recombinant mouse LXR{alpha} proteins were expressed in Escherichia coli (BL21, DE3) and purified using standard techniques and purification kit Mag Extractor (TOYOBO) according to the manufacturer's protocol. Briefly, bacterial culture containing kanamycin were grown at 37 °C. After induction of recombinant proteins for 2–3 h, cells were resuspended in lysis buffer (6 M guanidine hydrochloride, 5 M NaCl (pH 8.0)) and lysed by sonication. The centrifuged supernatant was mixed for 30 min at room temperature on a rotator with magnetic nickel beads. Protein-absorbed beads were washed with lysis buffer, and recombinant LXR{alpha} proteins were eluted with elution buffer. After dialysis to exclude guanidine, the concentration and size of histidine-tagged proteins were estimated by SDS-PAGE followed by Coomassie Blue staining and immunoblotting using a known quantity of molecular weight standards. The purified proteins were stored at –80 °C until experiments were performed.

Bovine purified PKA catalytic subunit was purchased from Promega. PKA c subunit, histidine-tagged LXR{alpha}, and [{gamma}-32P]ATP were mixed in PKA buffer (50 mM Tris-HCl (pH 7.5), 10 mM NaCl, 10 mM MgCl2, 1 mM DTT) and incubated for 45 min at 30 °C. Samples were analyzed by SDS-PAGE, and phosphorylation was visualized by autoradiography. Quantity of histidine-tagged protein was confirmed by immunoblotting using anti-His 5 antibody. Histone H1 protein (Calbiochem) was used as positive control in kinase assays.

In Vivo Kinase Assay—For in vivo kinase assay, COS7 cells prepared in 100-mm collagen-coated dishes at 1 x 106 cells/dish were transfected with control or expression vector for HA-tagged human LXR{alpha} vectors. After transfection, the cells were starved in phosphate-deficient medium for 12 h and then incubated for 2 h in the same medium containing 500 µCi/ml [32P]orthophosphate. Cells were treated with PKA activators (forskolin 10 µM, dibutyryl-cAMP 1 mM, isobutylmethylxanthine 1 mM) for 30 min before harvesting.

At the end of the labeling period the cells were washed ice-cold phosphate-buffered saline, harvested, and lysed on ice. Protein samples were extracted in lysis buffer mentioned elsewhere and centrifuged at 15,000 rpm 4 °C for 10 min. Supernatants were subjected to immunoprecipitation assay used with anti HA antibody (Roche Applied Science) as previously described. The immunocomplex were eluted in sample buffer, resolved by SDS-PAGE (8% gel), visualized with autoradiography, and immunoblotted.

Electrophoretic Mobility Shift Assay—Nuclear extracts were prepared from livers as previously described (32). RXR protein was generated from expression vector using a coupled in vitro reticulocyte transcription/translation system (Promega). Double-stranded oligonucleotides of LXR response element in SREBP-1c promoter using in EMSA were prepared as previously described. In vitro synthetic protein lysate or nuclear extracts (~1 µg) were incubated. DNA-protein complex were resolved on a 4% polyacrylamide gel.

Chromatin Immunoprecipitation (ChIP) Assay—The ChIP assay was conducted with a chromatin immunoprecipitation kit (Upstate%20Biotechnology">Upstate Biotechnology, Lake Placid, NY). After H2.35 cells were treated with PKA activators (10 µM forskolin, 100 µM dibutyryl-cAMP) or vehicle under T0901317 (10 µM) for 1 h at 37 °C, H2.35 cells were cross-linked for 10 min by adding formaldehyde directly to culture medium to a final concentration of 1%. Cross-linked cells were washed with ice-cold phosphate-buffered saline containing protease inhibitors, scraped, pelleted, resuspended in 200 µl of SDS lysis buffer (1% SDS, 10 mM EDTA, 50 mM Tris-HCl (pH 8.0)) per 1 x 106 cells and incubated for 10 min on ice. The lysates were then sonicated for 30 s each by sonicator (Sonifer 250, Branson) with 20% duty cycle and 10% output power. The samples were on ice for 1 min between the cycles. After sonication the samples were centrifuged, and supernatant was diluted 10-fold in ChIP dilution buffer containing protease inhibitors. 2-ml aliquots were precleared with 75 µl of a 50% slurry of salmon sperm DNA/protein A-Sepharose for 30 min at 4 °C and then incubated overnight with 3 µg of anti-RXR antibody or control IgG. Antibody-protein-DNA complexes were immunoprecipitated with 60 µl of protein A. After intensive washing, pellets were eluted by freshly prepared elution buffer (1% SDS, 0.1 M NaHCO3). Formaldehyde cross-linking was reversed by overnight incubation at 65 °C after adding 20 µl of 5 M NaCl. Samples were purified with phenol:chloroform:isoamyl alcohol and precipitated with ethanol. DNA pellets were dissolved with Tris-EDTA buffer and used as templates in PCR. Eight µl of 20 µl of DNA solution was used for PCR amplification (1st step of 95 °C for 3 min (one cycle), 2nd step of 94 °C for 1 min, 62.1 °C for 30 s, 72 °C for 1 min (25 cycles)). ChIP primers were 5'-GAACCAGCGGTGGGAACACAGAGC-3' and 5'-GACGGCGGCAGCTCGGGTTTCTC.

Immunoblotting and Immunoprecipitation—COS7 cells were seeded on 100-mm dishes and transfected with the expression vectors. After incubation for 48 h, dbcAMP (100 µM), forskolin (10 µM), and isobutylmethylxanthine (100 µM) were added into medium for 30 min, and then cells were harvested. Protein lysate was extracted in lysis buffer (25 mM HEPES (pH 7.9), 50 mM KCl, 6% glycerol, 5 mM MgCl2, 0.5% Triton X-100, 1 mM DTT, 50 mM NaF, 40 mM beta-glycerophosphate, 25 mM sodium pyrophosphate, protease inhibitor mixture (Roche Applied Science)) on ice 20 min and centrifuge at 15,000 rpm at 4 °C for 10 min. Supernatants were subjected to immunoprecipitation assay as previously described (29).

GST Pulldown Assay—GST and GST-LXR{alpha} proteins were prepared using standard techniques according to the manufacturer's protocol. Briefly, E. coli (BL21, DE3) transformed with the GST or GST-LXR{alpha} expression vector were incubated before induction at room temperature for 4 h with 0.4 mM isopropyl 1-thio-beta-D-galactopyranoside. The cells were harvested by centrifugation and suspended in buffer A (25 mM HEPES (pH 7.9), 50 mM KCl, 6% glycerol, 5 mM EDTA, 5 mM MgCl2, 0.5% Triton X-100, protease inhibitor mixture, 1 mM DTT). The cells were lysed by sonication, and cellular debris was removed by centrifugation at 15,000 rpm at 4 °C for 10 min. Recombinant GST or GST-LXR{alpha} proteins were purified by glutathione-Sepharose beads according to the manufacturer's protocol (Amersham Biosciences). GST fusion proteins were eluted (50 mM Tris HCl (pH 8.0), 50 mM NaCl, 10 mM glutathione, protease inhibitor mixture, 1 mM DTT). Amounts and sizes of GST or GST-LXR{alpha} proteins were estimated by SDS-PAGE followed by Coomassie Blue staining and immunoblotting using anti-LXR antibody. GST or GST-LXR{alpha} and the PKA c subunit or equal amounts of bovine serum albumin were mixed in PKA buffer (50 mM Tris HCl (pH 7.5), 10 mM NaCl, 10 mM MgCl2, 1 mM DTT, 50 mM NaF, 20 mM beta-glycerophosphate) and incubated for 45 min at 30 °C. After adding glutathione beads and 35S-radiolabeled SRC-1 nuclear receptor interaction domain (amino acids 576–779) synthesized in vitro to samples and incubation for 2 h at 4 °C, beads were washed 3 times with ice-cold phosphate-buffered saline containing 0.1% Triton X-100. Proteins bound to beads were eluted with elution buffer (50 mM Tris-HCl (pH 8.0), 50 mM glutathione), resolved by SDS-PAGE, and visualized autoradiography.


    RESULTS
 TOP
 ABSTRACT
 INTRODUCTION
 EXPERIMENTAL PROCEDURES
 RESULTS
 DISCUSSION
 REFERENCES
 
PKA Represses Expression of SREBP-1 in Vivo—Expression of SREBP-1c in the liver is highly regulated by nutrition; it is suppressed at fasting and induced in a refed state as previously reported (6). One potential mechanism of this suppression at fasting could be mediated through the cAMP/PKA system that mediates the glucagon signal. C57BL/6J mice in a refed state were administrated with dibutyryl-cAMP and theophylline for activation of PKA to mimic fasting signal. The SREBP-1c mRNA that was highly induced by refeeding was robustly repressed by cAMP/theophylline administration (Fig. 1A). Reciprocally, phosphoenolpyruvate carboxykinase, a gene that controls gluconeogenesis and a well known target of the glucagon/cAMP/PKA signal, was suppressed by refeeding but restored by these PKA activators. The reduction of SREBP-1 mRNA level by PKA activation was associated with a robust decrease in active SREBP-1c protein in hepatic nuclear extracts (Fig. 1B). SREBP-1c expression is dominantly controlled by LXR/RXR that binds directly to the two LXREs in the SREBP-1c promoter (8, 9). As shown in Fig. 1B, the expression of LXR/RXR was not affected by the PKA activation. Therefore, SREBP-1c suppression by PKA was not due to reduction in the amounts of LXR/RXR.


Figure 1
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FIGURE 1.
Effects of PKA activation on expression of mouse hepatic SREBP-1. C57BL6/J mice fasted for 24 h (Fasted) followed by refeeding with a high sucrose high fat diet for 12 h (Refed) were intravenously treated with vehicle or a combination of PKA activators, dbcAMP (35 mg/kg) and theophylline (30 mg/kg) (PKA). Two hours post-injection mice were sacrificed, and total liver RNA and nuclear extracts were prepared. Total RNA (10 µg) and nuclear extracts (40 µg of protein) were subjected to Northern (panel A) and immunoblotting (panel B), respectively.

 
PKA Activation Represses LXR-mediated SREBP-1 Induction—The effect of PKA on LXR activation of SREBP-1c was estimated. In rat primary hepatocytes, the SREBP-1c mRNA level was essentially undetectable but was highly induced by T0901317, an LXR agonist. This induction was substantially suppressed by the addition of dibutyryl-cAMP whereas expression of LXR and RXR was not increased at the mRNA level (Fig. 2). These data suggest that PKA repression of SREBP-1c was mediated not through changes in LXR expression but through modulating the LXR activity. Meanwhile, LXR agonist-induced expression of ABCA1 (ATP binding cassette transporter A1), an LXR target gene, was only slightly affected by PKA activation.


Figure 2
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FIGURE 2.
Effects of PKA on mRNA level of SREBP-1 induced by the synthetic LXR ligand, T0901317. Rat primary hepatocytes were incubated in medium containing vehicle or T0901317 (1 µM) in the presence or absence of dbcAMP (30 µM) for 24 h. Cells were harvested for extraction of total RNA followed by northern blotting as described under "Experimental Procedures." PEPCK, phosphoenolpyruvate carboxykinase.

 
LXRE Response Element Is Responsible for PKA Inhibition of SREBP-1c Promoter—To further investigate the PKA effect on SREBP-1 transcription, in vitro reporter assays for SREBP-1c promoter were performed. Luciferase reporters linked to different sizes of SREBP-1c promoter region around the LXR-binding sites (LXREs) and expression vectors of LXR{alpha} and the PKA catalytic subunit for PKA activation were transfected into HepG2 cells (Fig. 3A). PKA expression did not affect the basal level of SREPB-1c promoter activity in HepG2 cells. Meanwhile, PKA co-expression strongly suppressed LXR{alpha}-mediated activation of SREBP-1c promoter. This was only observed in LXRE-containing promoters (–2.6 kilobase pairs and –550 bp). The shorter construct lacking LXREs (90 bp) did not show LXR activation or PKA inhibition. Thus, the inhibitory effect of PKA on SREBP-1c promoter was conceivably mediated through LXREs. This was supported by the LXRE enhancer construct assays, demonstrating that endogenous PKA activation by forskolin, an adenylate cyclase activator, dose-dependently inhibited LXRE enhancer activity induced by the LXR ligand, and this inhibitory effect was abolished by co-expression of the PKA regulatory subunit dominant negative form (Fig. 3B). The mechanism against the PKA suppression of LXR activity was further explored the using Gal4 DNA binding domain (DBD) protein fused to LXR{alpha} LBD in HepG2 (Fig. 3C). LXR-LBD was highly activated in this system by the LXR synthetic ligand as previously reported. This activation was completely abolished by co-transfection of PKA, suggesting that PKA activation inhibits ligand-mediated activation of LXR. PKA-mediated inhibition of LXR transcriptional activity was supported by luciferase assays using the promoter of ABCA1, another LXR target gene. Mouse ABCA1 promoter activity was also dose-dependently inhibited by PKA expression in both basal and LXR-induced conditions (Fig. 3D).


Figure 3
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FIGURE 3.
Effects of PKA on SREBP-1c promoter activity induced by LXR{alpha}. A, HepG2 cells were transfected with SREBP-1c promoter Luc vector (300 ng/well), CMV Renilla luciferase vector as an internal reference (2.5 ng/well), expression vectors for LXR{alpha} (100 ng/well), and PKA catalytic subunit (100 ng/well). After transfection, the cells were further incubated with the medium containing vehicle or T0901317 (T, 1 µM) for 20 h. kbp, kilobase pairs. RLU, relative light units. B, HepG2 cells were transfected with LXRE enhancer Luc vector (200 ng/well), CMV Renilla luciferase vector (2.5 ng/well), and expression vectors for LXR{alpha} (100 ng/well) and PKA regulatory subunit dominant negative form (DN PKA) (300 ng/well). After transfection cells were incubated in medium containing vehicle or T0901317 (1 µM) and forskolin (0, 0.1, 0.3, 1, 3 µM) for 20 h. Assays were performed as described under "Experimental Procedures." C, HepG2 cells were transfected with expression vectors for Gal4-DBD-LXR{alpha} ligand binding domain (150 ng/well), PKA Gal4 RE LUC vector (150 ng/well), PKA (3, 10, 30, 100, 200 ng/well), and CMV Renilla luciferase vector (2.5 ng/well). After each transfection cells were incubated in medium containing vehicle or T0901317 (1 µM)) for 20 h and subjected luciferase and Renilla reporter assays as in described under "Experimental Procedures." D, 293 cells were transfected with human ABCA1 promoter Luc vector (300 ng/well), expression vector for LXR{alpha} (100 ng/well), PKA (0, 3, 10, 30, 100 ng/well), and CMV Renilla luciferase vector for internal reference (2.5 ng/well). After each transfection cells were incubated in medium containing vehicle or T0901317 (1 µM) for 20 h.

 
LXR{alpha} Is Phosphorylated by PKA in Vitro—These data led us to speculate that PKA modulates LXR activity, most likely through direct phosphorylation of LXR{alpha}. To test this hypothesis, in vitro kinase assays of LXR{alpha} were performed. Purified recombinant protein of histidine-tagged LXR{alpha} was incubated with the PKA catalytic subunit. LXR{alpha} protein was phosphorylated by PKA as well as PKA autophosphorylation and histone H1 phosphorylation as positive controls of PKA target protein (Fig. 4A). Functional domains of the LXR{alpha} protein were also tested using this in vitro kinase assay (Fig. 4B). Every domain of LXR{alpha} was significantly phosphorylated. In the amino acid sequence of PKA, there are two potential PKA target sites (serines 195 and 196; threonine 290 and serine 291) in the LBD/heterodimerization domain. Introduction of mutation in which these serine residues were replaced by alanine caused resistance to PKA inhibition of SREBP-1c promoter activation (Fig. 4C). To assess whether LXR{alpha} is phosphorylated by PKA in vivo, COS7 cells were transfected with expression vector for HA-tagged LXR{alpha} and subsequently labeled with [32P]orthophosphate. After treatment with PKA activators, the phosphorylation state of LXR{alpha} was examined by autoradiography. As evident from autoradiography and immunoblots (Fig. 4D), PKA stimulation induced the phosphorylation state of LXR{alpha}. These results indicate that PKA directly phosphorylates LXR protein, which is crucial for PKA inhibition of LXR activity.

DNA Binding Activity of LXR/RXR Heterodimer Was Decreased by PKA Phosphorylation of LXR{alpha}—The effect of LXR{alpha} phosphorylation by PKA on DNA binding was tested by EMSA assays (Fig. 5A). Recombinant LXR{alpha} protein requires RXR for its binding to LXRE. The signal of LXR/RXR bound to LXRE was partially decreased by PKA treatment of LXR. This effect required the incubation of LXR with PKA at 30 °C, indicating the PKA inhibition was mediated through its kinase activity. To confirm this effect in vivo, nuclear extracts of livers from dibutyryl-cAMP/theophylline-administrated mice were prepared and subjected to EMSA assay (Fig. 5B). PKA activation in these nuclear extracts was confirmed by phosphorylation of CREB, a well known PKA target in mouse livers, as shown by immunoblot analysis. EMSAs of these nuclear extracts demonstrated that the signal of LXRE binding mainly from LXR/RXR, as confirmed by supershift with LXR and RXR antibodies, was dose-dependently diminished by PKA administration. Next, to determine whether PKA activation reduced DNA binding activity of LXR/RXR heterodimer, ChIP assay analysis on extracts from H2.35 cells, a mouse hepatocyte-derived cell line, was conducted. Anti-RXR antibody for immunoprecipitation of LXR/RXR heterodimer, and primers to detect LXRE on SREBP-1c promoter for PCR were used. As shown in Fig. 5C, the interaction of LXR/RXR heterodimer with LXRE was decreased upon PKA activation in vivo. These data suggest that the modification of LXR activity by PKA is attributed to reduction of DNA binding activity of LXR/RXR heterodimer via PKA phosphorylation of LXR{alpha}.


Figure 4
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FIGURE 4.
Direct phosphorylation of recombinant LXR{alpha} (rLXR{alpha}) protein at the serine or threonine residues in the ligand binding domain is crucial for inhibition of LXR signaling by dbcAMP. A, in vitro kinase assay of full-length LXR{alpha}. Histone H1 or recombinant histidine-tagged LXR{alpha} were incubated with PKA and [32P]ATP and resolved by SDS-PAGE (8% gel). Phosphorylated protein was visualized by autoradiography. Phosphorylation of histone H1 and PKA itself was shown as a positive control of PKA target protein. B, in vitro kinase assay of several fragments of LXR{alpha}. Amino acids 1–163, 162–326, and 325–445, corresponding amino acids sequences of LXR{alpha} protein, respectively, were incubated with PKA. Samples were resolved by SDS-PAGE (12% gel) and electrophoretically transferred to PVDF membranes. Phosphorylated proteins were visualized by autoradiography. LXR{alpha} proteins were estimated by immunoblotting with anti-histidine antibody. WB, Western blot. C, substitution of serine or threonine amino acid residues for alanine in LXR{alpha} abolished the PKA-dependent repression of a luciferase reporter derived by LXRE. Expression vectors for wild type LXR{alpha} (wt LXR{alpha}) or an LXR{alpha} mutant with S195A and S196A (195A196A) or with T290 and S290A (290A 291A) (100 ng/well) and CMV Renilla luciferase vector (2.5 ng/well) were cotransfected with LXRE enhancer reporter plasmid (100 ng/well) into 293 cells. After transfection dbcAMP was added into the medium followed by incubation for 20 h. Luciferase activity was measured. Relative activity compared with each control was plotted. wt, wild type. D, PKA activation increases phosphorylation of LXR{alpha} in vivo. COS7 cells transfected with HA-tagged LXR{alpha} were metabolically labeled with [32P]orthophosphate and incubated for 30 min with PKA activators (10 µM, forskolin, 1 mM dibutyryl-cAMP, 1 mM isobutylmethylxanthine) before harvesting. Protein samples were immunoprecipitated (IP) with anti-HA antibody (ab). Labeled proteins resolved by SDS-PAGE were autoradiographed and immunoblotted. [35S]Met is methionine-labeled LXR{alpha}, used for the positive control.

 


Figure 5
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FIGURE 5.
Phosphorylation of LXR{alpha} by PKA decreases binding of LXR{alpha}/RXR to LXRE. A, decreased binding of LXR{alpha}/RXR to LXRE by PKA treatment with LXR{alpha} in electrophoretic mobility shift assays. Increasing amounts of recombinant LXR{alpha} (rLXR{alpha}, left panel) were incubated with bovine serum albumin (used as nonspecific protein control) or PKA catalytic subunit and then incubated with radiolabeled LXRE probe and in vitro synthesized RXR for EMSA as described under "Experimental Procedures." In the right panel, recombinant LXR{alpha} was preincubated with bovine serum albumin or PKA at 30 or 0 °C (on ice) (right panel) and then incubated with radiolabeled LXRE probe and in vitro synthesized RXR for EMSA as described under "Experimental Procedures." IVT, in vitro translated. B, in vivo PKA activation decreased the DNA binding activity of LXR/RXR complex in EMSA (left panel). The various doses of PKA activators (vehicle, 35 mg/kg dbcAMP + 30 mg/kg theophylline, 105 mg/kg dbcAMP + 30 mg/kg theophylline) were administrated to refed C57BL6/J mice. Nuclear protein extracts prepared from livers were incubated with the 32P-labeled LXRE probe. The signal from LXR/RXR was confirmed by supershift assays after the addition of LXR and RXR antibodies (ab) to the incubations. Nuclear protein (30 µg/lane) was resolved by SDS-PAGE (10% gel) and subjected to immunoblotting with anti phospho (P)-CREB, anti-CREB, and anti-LXR{alpha} antibodies (right panel). C, PKA activation decreases DNA binding of LXR/RXR complex to LXRE on SREBP-1c promoter in vivo. H2.35 cells were treated with PKA activators (10 µM forskolin, 100 µM dibutyryl-cAMP) or vehicle for 60 min. Because LXR antibody suitable for immunoprecipitation is not currently available (43), ChIP analysis was performed with anti-RXR antibody or control IgG. Primers specific to the LXRE region of mouse SREBP-1c promoter were used for PCR analysis. As a positive control (3% INPUT), the assay was performed with the same primers on the genomic DNA on which the ChIP assays were performed.

 
Coactivator or Corepressor Recruitments of LXR{alpha} Are Reciprocally Modified by LXR{alpha} Phosphorylation by PKA—It was reported that in LXR{alpha} or beta-mediated transcription of SREBP-1c; SRC-1 works as a coactivator, and NcoR1 works as a corepressor (33). To test the possibility of involvement of these cofactors in PKA inhibition of LXR activity, mammalian two-hybrid assays were preformed. The system detects the binding of VP16-AD-LXR{alpha} fusion protein and Gal4-DBD-SRC-1-NID (a functional region that interacts with nuclear receptors (34)) in 293 cells. The addition of the LXR ligand markedly activated the signal, as evidenced by recruitment of SRC-1 to LXR. PKA co-expression markedly and dose-dependently inhibited the recruitment of SRC-1 (Fig. 6A). Inversely, PKA co-expression increased the recruitment of NcoR1-NID to AD-LXR{alpha} (Fig. 6B). Inhibition of the binding between LXR{alpha} and SRC-1 NID by PKA was directly confirmed in pulldown assays. The labeled SRC-1-NID was pulled down by GST-LXR{alpha}, and the signal was reduced by PKA phosphorylation (Fig. 6C). These data suggest that PKA activation modifies LXR and enhances dissociation of coactivator and recruitment of corepressor, leading to repression of LXR transcriptional activity.


Figure 6
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FIGURE 6.
PKA modulates recruitment of coactivator and corepressor for LXR{alpha}. A, inhibition of recruitment of SRC-1 to LXR{alpha} by PKA in the mammalian two-hybrid system. 293 cells were transfected with Gal4 RE Luc vector, CMV Renilla luciferase vector (2.5 ng/well), and expression vectors for VP-16-LXR{alpha} (amino acids 1–445). Gal4-DBD-SRC-1, DBD of Gal4 fused to NID of SRC-1 and PKA. Four hours after transfection the cells were further incubated with medium containing vehicle or T0901317 (1 µM) for 20 h. AD, activation domain. B, activation of recruitment of NcoR-1 to LXR{alpha} by PKA. 293 cells were transfected with Gal4 RE Luc vector, SV40 Renilla luciferase vector (25 ng/well), and expression vectors for VP-16 LXR{alpha} ((amino acid 1–445), Gal4-DBD-NcoR1, and PKA. 4 h after transfection the cells were further incubated with medium containing vehicle or T0901317 (1µM) for 20 h. C, PKA treatment inhibited the interaction of LXR{alpha} with SRC-1 in vitro. Recombinant GST-LXR{alpha} fusion protein was treated with PKA or bovine serum albumin (used as nonspecific control protein) at 30 °C and then incubated with 35S-radiolabeled SRC-1-NID synthesized in vitro and glutathione-Sepharose beads. Pulled-down proteins were resolved by SDS-PAGE (12% gel) as described under "Experimental Procedures."

 
LXR{alpha}/RXR Interaction Is Impaired by PKA—Finally, the effect of PKA on heterodimerization of LXR/RXR was estimated by co-immunoprecipitation in vivo. Myc-tagged LXR{alpha} and RXR were co-expressed in COS7 with or without PKA activation (Fig. 7A). RXR was co-immunoprecipitated with the tagged LXR{alpha}. This binding between LXR{alpha} and RXR was nearly eliminated by PKA activation. In contrast, PKA increased the co-immunoprecipitation of FLAG-tagged CBP and HA-tagged CREB, well characterized targets of PKA (Fig. 7B). These data demonstrated that the interaction of LXR{alpha} and RXR is impaired by PKA activation, explaining at least partly PKA inhibition of LXR transactivation.


Figure 7
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FIGURE 7.
PKA prevents interaction between LXR{alpha} and RXR in vivo. A, PKA inhibition of co-immunoprecipitation of LXR{alpha} and RXR. B, PKA activation of co-immunoprecipitation of CREB and CBP. Cos7 cells were transfected with expression vector for Myc-tagged LXR{alpha} and RXR (A) or for FLAG-tagged CBP and HA-tagged CREB (B). After incubation for 48 h, cells were treated with medium containing PKA activators (100 µM dbcAMP, 10 µM forskolin, 100 µM isobutylmethylxanthine) for 30 min and harvested. Immunoprecipitation (IP) and immunoblotting (WB) with the indicated antibodies (ab) were performed as described under "Experimental Procedures." Proteins were extracted by lysis buffer and resolved by SDS-PAGE (8% gel for LXR and RXR, 4% gel for CBP, and 10% gel for CREB). There is different exposure time between lysate and immunoprecipitation samples for detection of FLAG-tagged CBP because intensity of protein amount of FLAG-tagged CBP in lysate was too strong.

 
Contribution of RXR to PKA Inhibition of LXR/RXR Effect on LXRE in SREBP-1c Promoter—In a previous report, RXR is shown as a substrate of PKA in vitro, and serine 27 is shown as essential for cAMP-mediated down-regulation of RXR transcriptional activation in COS cells by assessed in luciferase assay (35). Therefore, the effect of PKA on RXR activity to regulate activity of SREBP-1c promoter was tested. HepG2 cells were transfected with wild type RXR or mutant RXR (S27A). As a result (Fig. 8), both wild type and mutant RXRs activate the LXRE-luciferase reporter in response to LG268, a synthetic RXR agonist, with a only slight (~25%) decrease in both basal and ligand-stimulated response by the RXR mutation. PKA activation dose-dependently inhibited this RXR-mediated LXRE reporter. The RXR mutation modestly prevented this negative effect of PKA on RXR function especially at low dose dbcAMP(10, 30 µM) but less at high dose dbcAMP(100 µM). These results indicate that RXR phosphorylation is at least in part involved in suppression of SREBP-1c promoter activity by cAMP/PKA signals.


    DISCUSSION
 TOP
 ABSTRACT
 INTRODUCTION
 EXPERIMENTAL PROCEDURES
 RESULTS
 DISCUSSION
 REFERENCES
 
Our current studies demonstrate that PKA directly phosphorylates LXR{alpha} protein and inhibits its signaling, resulting in suppression of SREBP-1c transcription both in vitro and in vivo. Phosphorylation of LXR{alpha}, presumably through its conformational change, causes two consequences; suppression of RXR dimerization leading to decreased binding to LXRE and suppression of the ligand activation followed by decreased recruitment of coactivator SRC-1 and increased recruitment of corepressor NcoR1. Both events lead to repression of LXR transactivation for SREBP-1c. PKA inhibition was more prominent for LBD activation of LXR than for its binding to LXRE.


Figure 8
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FIGURE 8.
PKA modifies RXR activity induced by RXR ligand on LXRE in SREBP-1c promoter. 293T cells were transfected with LXRE enhancer Luc vector (300 ng/well), CMV Renilla luciferase vector (2.5 ng/well), and expression vector for wild type RXR{alpha} or mutant RXR (400 ng/well). After transfection cells were incubated for 20 h in medium containing vehicle or T0901317 (1 µM), LG268 (30 nM), or dbcAMP (0, 3, 10, 30, 100 µM) and subjected to luciferase and Renilla reporter assays. RLU, relative light units.

 
Post-translational modification of transcription factors by phosphorylation provides a rapid cellular response to environmental changes. We now show that the ligand-induced transactivation of LXR can be regulated in vivo, ex vivo, and in vitro by PKA-dependent phosphorylation. The catalytic subunit of PKA has been identified in the nucleus and phosphorylates numerous transcription factors, modulating their transcriptional activities positively such as hepatocyte nuclear factor-4{alpha} and negatively such as L-type PK (28). Now, LXR can be added to the list of PKA-modulating factors. Although PKA-dependent phosphorylation sites (RX0–2(S/T)) lie within all domains of LXR, the 195–196 serines and 290–291 threonine and serine residues might be crucial for ligand-induced conformational change since these sites in human LXR{alpha} completely match the most preferable consensus sequence (R(R/K)X(S/T)). It is also possible that phosphorylation states of these critical sites control other potential phosphorylation sites. LXR/RXR also transactivate other genes such as the ABCA1 (36) and the ABCG family (37, 38). The LXR{alpha}-induced activity of the ABCA1 promoter containing LXRE was also repressed by PKA similarly to the SREBP-1c promoter. However, the inhibitory effect of PKA on the ABCA1 mRNA level was minimal in our sets of experiments in livers and hepatic cells. Conversely, expression of ABCA1 in murine macrophage cell line RAW 264 cells was reported to be up-regulated by dbcAMP (39, 40), although its responsible regulatory motif in the ABCA1 promoter has not been identified. This undetermined cAMP-dependent activation mechanism might unmask LXR-mediated suppression of ABCA1 promoter by PKA in the liver.

It has been reported that the glucagon/cAMP signal suppresses the expression of SREBP-1c in rat primary hepatocytes (24). Our current data clarify its molecular mechanism. The hypothesis that PKA suppresses SREBP-1c through LXR signal is supported by the following observations. 1) LXR/RXR is a dominant activator for SREBP-1c. 2) PKA inhibition of SREBP-1c promoter activity was more prominent in its activation by the LXR agonist than in the basal level. 3) Deletion studies with SREBP-1c promoter luciferase constructs revealed that LXRE is responsible for PKA inhibition. Based upon our findings the glucagon/cAMP/PKA signal could at least partially explain fasting suppression of SREBP-1c through LXR/RXR and LXRE. In support, it was reported that the effect of insulin on SREBP-1c expression could be mediated by LXR and LXRE (41). Further studies are needed to fully determine the extent to which the glucagon/cAMP/PKA signal contributes to fasting regulation of hepatic metabolic genes including SREBP-1c.

In a recent report it is observed that LXR{alpha} and -beta are phosphorylated in HEK293 cells by an unknown kinase(s) (42). In their data basal and ligand-stimulated LXR{alpha} activity to induce ABCA1 promoter were not altered by substitution of phosphorylation residue to alanine. However, the response of mutant LXR{alpha} to potential kinases remains to be tested. Our study for the first time suggests the possibility that LXR mediates a nutritional signal via phosphorylation by PKA. Further study is needed to more precisely identify the physiological function in LXR phosphorylation.

In summary, transcriptional activity of LXR{alpha} on SREBP-1c promoter was decreased by PKA. Direct phosphorylation of LXR{alpha} by PKA resulted in a decrease of DNA binding and coactivator recruitment of LXR. This first demonstration of modification of LXR activity by phosphorylation suggests that reduction of mRNA level of SREBP-1c in fasting conditions might be mechanistically at least in part through LXR phosphorylation.


    FOOTNOTES
 
* This work was supported by grants-in-aid from the Ministry of Science, Education, Culture, and Technology of Japan. The costs of publication of this article were defrayed in part by the payment of page charges. This article must therefore be hereby marked "advertisement" in accordance with 18 U.S.C. Section 1734 solely to indicate this fact. Back

1 To whom correspondence and requests should be addressed. Fax: 81-29-853-317; E-mail: shimano-tky{at}umin.ac.jp.

2 The abbreviations used are: SREBP, sterol regulatory element-binding protein; dbcAMP, dibutyryl-cAMP; NID, nuclear receptor interaction domain; DBD, DNA binding domain; LBD, ligand binding domain; LXR, liver X receptor {alpha}; PKA, protein kinase A; CREB, cAMP-response element-binding protein; CBP, CREB-binding protein; HA, hemagglutinin; CMV, cytomegalovirus; DTT, dithiothreitol; EMSA, electrophoretic mobility shift assay; ChIP, chromatin immunoprecipitation; LXRE, LXR responsive element; RE, responsive element. Back


    ACKNOWLEDGMENTS
 
We are grateful to Alyssa H. Hasty for critical reading of this manuscript and Drs. Tomoaki Morioka and Hidenori Koyama for help in generation of expression plasmid of mutated (dominant negative) form of the regulatory type 1 subunit of cyclic AMP-dependent protein kinase.



    REFERENCES
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 ABSTRACT
 INTRODUCTION
 EXPERIMENTAL PROCEDURES
 RESULTS
 DISCUSSION
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