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J. Biol. Chem., Vol. 282, Issue 17, 12590-12597, April 27, 2007
2,3,7,8-Tetrachlorodibenzo-p-dioxin Induces Premature Activation of the KLF2 Regulon during Thymocyte Development*
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| ABSTRACT |
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15-fold induction of KLF2 as early as the TN2 (CD44+, CD25+) stage of development and immediately precedes acute cell loss in the TN3, TN4, and double positive (CD4+, CD8+) cell stages. Induction of KLF2 occurs within 12 h of TCDD exposure and is fully dependent on expression of the aryl hydrocarbon receptor. In addition, TCDD exposure alters the expression of several factors comprising the KLF2 regulon, including Edg1/S1P1,
7 integrin, CD52, Cdkn2d (cyclin-dependent kinase inhibitor 2D), s100a4, and IL10R
. These findings indicate that the pollutant TCDD interferes with early thymopoeisis via ectopic expression of the KLF2 regulon. | INTRODUCTION |
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The thymus is the primary source of the T cell repertoire and thus a critical part of the adaptive immune system. Within this organ, T cell development occurs in a series of highly regulated differentiation events (7). At the beginning of this developmental process, the thymus is seeded with pluripotent bone marrow progenitors. Interactions with resident stromal cells then induce T lineage commitment and V(D)J rearrangement of the genes encoding the
and
chains of the T cell receptor (TCR) (7). Several surface markers are coordinately regulated during this developmental process and are commonly used to represent specific stages of thymopoeisis (see Fig. 1A). The earliest progenitors within the thymus are negative for the mature surface markers CD4, CD8, and CD3 (8). These "triple negative" (TN) cells can be further categorized into four ordered developmental stages during which the TCR
gene is rearranged and then expressed at the cell surface: TN1 (CD44+, CD25-)
TN2 (CD44+, CD25+)
TN3 (CD44-, CD25+)
TN4 (CD44-, CD25-) (8). If TCR
rearrangement is successful, thymocytes then initiate recombination of TCR
as well as CD4 and CD8 expression (7). Although "double positive" (DP; CD4+, CD8+) cells comprise
80% of all thymocytes, the vast majority of these cells fail to generate an appropriate TCR
signaling complex (7). Only cells that pass both positive and negative TCR selection are released into the bloodstream as CD4 helper or CD8 cytotoxic single positive (SP) T cells.
The process of TN development is highly sensitive to TCDD. Exposure to this environmental pollutant results in proliferation arrest of the TN3 and TN4 stages of development (9), as well as premature emigration of TN3-like thymocytes (10). Several lines of evidence suggest that these TN defects are due to cell autonomous changes in gene transcription. Prior research has demonstrated that thymocyte, but not stromal, expression of the AHR signaling pathway is required for TCDD-induced atrophy (9, 11, 12). Moreover, mutant constructs of the Ah receptor have demonstrated that AHR/DNA interactions are required for thymic toxicity (13). Overall, these results are consistent with the idea that TCDD dysregulates TN expression of a gene, or genes, with a critical role in thymocyte proliferation and/or emigration.
In this report, we demonstrate that TCDD triggers misexpression of the KLF2 (Kruppel-like factor 2) regulon in an AHR-dependent manner. During normal thymocyte development, KLF2 is expressed exclusively in the mature SP populations and enforces (i) egress to the peripheral lymphoid organs and (ii) peripheral T cell quiescence (1419). Here, we show that the environmental contaminant TCDD induces ectopic expression of the KLF2 transcription factor and its associated regulon during TN thymopoeisis.
| EXPERIMENTAL PROCEDURES |
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TCDD Treatment57-week-old males were injected once intraperitoneally with 100 µg/kg body weight TCDD. Me2SO was used as vehicle control at a dose of 1.25 ml/kg body weight. Animals from age-matched litters were used for each experiment.
Thymocyte PreparationEach thymus was homogenized by gentle grinding in low glucose Dulbecco's modified Eagle's medium supplemented with 5% fetal bovine serum (Invitrogen) and passage through a 20-gauge needle. Red blood cells were lysed in ammonium chloride buffer (0.17 M NH4Cl, 10 mM KHCO3, and 1 mM EDTA, pH 7.4) for 5 min on ice. Thymocyte samples were then pelleted and resuspended in phosphate-buffered saline supplemented with 0.5% (w/v) bovine serum albumin and 0.1% (w/v) sodium azide (both from Sigma).
Cell CountingThymus cell count was determined using a BD Biosciences FACSCalibur flow cytometer (Franklin Lakes, NJ). Each thymocyte sample was acquired for 15 s at a 0.2 µl/s flow rate, gated based on forward and side scatter, and then enumerated.
AntibodiesThe following monoclonal antibodies were purchased from Ebioscience (San Diego, CA) or Pharmingen (Franklin Lakes, NJ) and used at a saturating concentration: fluorescein isothiocyanate (FITC)-conjugated CD4 (clone GK1.5; Ebioscience) and CD44 (IM7; Ebioscience); PE-conjugated CD8
(53-6.7; Pharmingen) and CD25 (3C7; Pharmingen); PE-Cy5-conjugated CD3
(145-2C11; Pharmingen) and
7 integrin (FIB504; Pharmingen); APC-conjugated CD3
(145-2C11; Ebioscience), CD11
(M1/70; Ebioscience), CD8
(53-6.7; Ebioscience), CD4 (RM4-5; Ebioscience).
Flow CytometryThymocytes were incubated in staining buffer (phosphate-buffered saline plus 0.5% bovine serum albumin and 0.1% NaN3) with the appropriate antibodies for 30 min at 4 °C. Each thymocyte sample was stained using two independent antibody mixtures. The CD4/CD8 double positive and single positive cells were analyzed using fluorescein isothiocyanate-CD4 and PE-CD8 antibodies. Triple negative cells were analyzed using fluorescein isothiocyanate-CD44, PE-CD8, PE-Cy5 or APC-CD3
, APC-CD8
, APC-CD4, APC-CD45R, and APC-CD11
antibodies. All cells negative for CD4/8/3/11
/CD45R staining were used for triple negative gating based on CD44 and CD25 expression. After antibody incubation, each sample was washed once with staining buffer and resuspended in staining buffer plus 1% (w/v) formaldehyde. Data were acquired using a FACSCalibur cytometer after calibrating for fluorescence channel overlap using the appropriate staining controls. Quantitation analysis was completed on BD Biosciences Cellquest software. The flow cytometry figures used in this publication were created using WinMDI 2.8 (Scripps Institute, La Jolla, CA) or FloJo (Ashland, OR) software.
RNA Isolation and qRT-PCRUnfixed cells were sorted at 4 °C using a BD Biosciences FacsVantage SE flow cytometer. Sorting accuracy was determined to be greater than 98% in each experiment. Total RNA was isolated from each cell sample using RNeasy kits with DNase treatment (Qiagen, Valencia, CA). Quantitect RT-PCR kits (Qiagen) were then used for combined reverse transcription and amplification of samples with gene-specific primers (IDT (Coralville, IA) and Applied Biosystems (Foster City, CA)). At least three replicate reactions were assayed for each sample using the ABI Prism 7900 system (Applied Biosystems, Foster City, CA). Equal amounts of total RNA were added to each well as measured by the 2100 Bioanalyzer (Agilent, Foster City, CA); RNA loading was further normalized to endogenous levels of hypoxanthine-guanine phosphoribosyl transferase. -Fold change was calculated as 2(
CT). RT-PCR primers are provided in the supplemental materials.
Microarray ProfilingTotal RNA (
100 ng) was isolated from TN2/TNX (CD44int, CD25high/int) cells, which were sorted from a pool of Rag-1 null mice treated with TCDD or Me2SO for 48 h (n = 8 for each treatment). Microarray comparisons were performed by the Genomics Institute of the Novartis Research Foundation (San Diego, CA), as previously described (see Refs. 22 and 23 and references therein). Briefly, each RNA was split into duplicate samples, linearly amplified, and then hybridized to GeneAtlas GNF1M high density oligonucleotide arrays (22, 23). Fluorescence values were normalized by global median scaling. Experimental variations due to differences in RNA amplification or hybridization were assessed using a two-tailed t test between each microarray data set. Expression changes with a p value greater than 0.05 were discarded.
StatisticsThe analysis of
7 integrin expression (Fig. 4B) was performed using a two-tailed t test. Time course data (Fig. 2) were analyzed using a two-way analysis of variance with a Bonferroni posttest for differences between treatment groups.
| RESULTS |
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We next set out to determine the relationship between TNX formation and TCDD-induced thymic cell loss. Toward this end, we first determined total thymus cellularity over a time course of TCDD exposure. We found that thymocyte cell number was significantly decreased within 72 h in TCDD treated animals; a
90% loss of control cell number was observed by 7 days (Fig. 2A). We then asked if cell loss occurred across all thymocyte populations or was specific to select developmental stages. In order to accurately enumerate each population, we designed our fluorescence gating to exclude TNX cells from all other TN populations (Fig. 2B). We then calculated the relative number of cells in each developmental stage by multiplying the percentage of cells in each stage by the previously determined total thymus cell count. Using this method, we observed that TCDD does not significantly affect the cellularity of the TN1 and early TN2 (CD44high) stages of development (Fig. 2C). The cell populations developmentally subsequent to the TN2/TNX stage, however, were significantly reduced in cell number. The TN3, TN4, and DP cell populations each exhibited acute cell loss within 48 h of TCDD exposure.
In order to elucidate the molecular events that lead to cell loss, we set out to determine the transcriptional profile of the late TN2 (CD44int) population in both its normal and TCDD-exposed states. To obtain enough RNA for microarray analysis, we sorted TN2/TNX cells from a pool of mice, which were treated with TCDD or Me2SO for 48 h (n = 8 for each treatment). The Rag-1 null genotype was utilized for these experiments due to fluorescence overlap between the TNX and TN4 population, which is present in wild type but not Rag-1 null mice. Total RNA was isolated from each cell population and used to determine global gene expression using high density oligonucleotide microarrays (22, 23). Treatment with TCDD was found to alter the expression of
2000 genes greater than 1.5-fold and
350 genes greater than 5-fold in each of two arrays. The top 20 up- and down-regulated expression changes are presented in Tables 1 and 2, respectively. The entire data set is available as supplemental material.
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7 integrin using a fluorochrome-labeled antibody against this epitope. Exposure to TCDD was found to increase protein levels exclusively in TN thymocytes (Fig. 4A). In order to determine which TN populations were affected, we further examined
7 expression using fluorescent gating similar to that shown in Fig. 2B. We observed that
7 expression was induced by TCDD exclusively in TN2 and TN3 stage cells (Fig. 4B). Although the relative increase in
7 expression was similar in both stages (
6-fold), the TN2 population was found to have the highest absolute levels of
7 expression by at least 1 order of magnitude. Next, we confirmed the microarray results (shown in Table 3) at the mRNA level using qRT-PCR. Due to the rarity of the TN2/TNX population, cells were sorted from a pool of Rag-1 null mice treated for 48 h with TCDD or Me2SO control (n = 5 for each treatment). This experiment was repeated to obtain two independent RNA samples for each treatment, which are referred to as RT-PCR sets "A" and "B" in Fig. 4C. Using qRT-PCR, we verified that TCDD exposure alters expression of
7 integrin, s100a4, Edg1 (endothelial differentiation, sphingolipid G-protein-coupled receptor 1)/S1P1, Cdkn2d, Emp3 (epithelial membrane protein 3), IL10R
, CD52, and Ptpn13 (protein-tyrosine phosphatase, nonreceptor type 13) mRNA; the direction and magnitude of each change was similar to our previous microarray results (Fig. 4C).
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| DISCUSSION |
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A series of flow cytometry experiments established that TCDD impairs thymopoeisis as early as the TN2 stage of development (Figs. 1 and 2). In initial studies, we observed that TCDD exposure induces the formation of a novel phenotypic derivative of the TN2 stage of development, which we termed TNX (Fig. 1, B and C). Moreover, we found that the three developmental stages downstream of TN2/TNX exhibit acute TCDD-induced cell loss, whereas the developmental stages upstream of TN2/TNX exhibit no change in cell number (Fig. 2C). These results suggested that TCDD-induced cell loss could be precipitated via interference in the transition from the TN2 to TN3 stage of thymopoeisis.
Microarray studies of TN2 cells in both their normal and TCDD-induced states (TNX) confirmed that TCDD substantially alters TN2 thymopoeisis. We found that TCDD alters the expression of over 350 genes by at least 5-fold and
2000 genes by at least 1.5-fold. As expected, many known AHR-regulated genes were found to be induced by TCDD exposure, such as Cyp1b1 (27), Lgals3 (24), PON1 (28), NQO1 (29), AHRR (30), and Scin (25). The preponderance of gene expression changes, however, has not been previously identified as TCDD-inducible. Since the AHR is thought to be a relatively nonpromiscuous regulator of transcription, we hypothesized that this massive change in gene expression could be preceded by misexpression of a central regulator of T lineage biology.
We observed that KLF2, a member of the Sp1 family of transcription factors, is ectopically expressed in TN2 and TN3 stage thymocytes within 12 h and 24 h of TCDD exposure, respectively (Fig. 3). Similar to other members of the Sp1/KLF family, KLF2 is a potent and promiscuous regulator of transcription that binds to CACC and GC-rich regions in gene promoters (26). Although KLF2 expression is limited to specific cell lineages (31), it has been demonstrated to be a master regulator of cellular function in these cell types, including vascular endothelial cells (3234), adipocytes (33, 35), monocytes (36), and T lymphocytes, in which the KLF2 regulon has a dual role in controlling both T cell migration and proliferation (1519). In normal T cell development, KLF2 is first expressed in mature SP thymocytes (14, 15) and triggers emigration to the peripheral immune organs via transcriptional control of a gene battery, which includes Edg1/S1P1 and
7 integrin (18). In the peripheral T cell population, KLF2 is constitutively expressed in the absence of TCR stimulation and is a negative regulator of T lineage activation/proliferation (15, 16). It has been demonstrated that forced expression of KLF2 is sufficient to program T cell quiescence (16), whereas deficiency results in spontaneous activation (15).
In TCDD-treated mice, induction of KLF2 occurs concomitantly with misexpression of numerous KLF2-regulated genes (Fig. 4). This phenotype includes robust activation of Edg1/S1P1 and
7 integrin, which have a critical role in thymocyte egress (18, 3739), as well as Cdkn2d, which negatively regulates cell cycle entry (40) (Fig. 4). Moreover, these genes likely represent only a small portion of the total number affected by premature expression of KLF2. Previous studies in vascular endothelial cells have indicated that upwards of 1000 genes are transcriptionally controlled through the expression level of KLF2 (33). These results indicate that ectopic expression of KLF2 may have a widespread effect on the TN transcriptome. Although the cumulative effects of these transcriptional changes on TN biology are uncertain, it is interesting to note that TCDD has been previously demonstrated to induce both premature emigration (10) and proliferation arrest of TN cells (9). Due to the prominent role of the KLF2 regulon in enforcing these phenotypes in SP biology (1517), it is tempting to speculate that ectopic expression of KLF2 may have a similar effect on TN stage cells. Overall, these results suggest that premature expression of KLF2 has a substantial effect on TN thymopoeisis. Although these results do not deny the possible importance of additional factors, the current study identifies KLF2 as a promising molecular link between TCDD exposure and thymic toxicity.
The full mechanism underlying the interplay between TCDD and the KLF2 signaling pathways is currently unclear. Although KLF2 induction occurs during the nascent stage of TCDD toxicity and is AHR-dependent (Fig. 3B), we have not yet been able to demonstrate direct AHR/promoter interaction. Chromatin immunoprecipitation studies are highly intractable for TN stage cells, and we have not yet identified a more suitable cell line or tissue that exhibits a KLF2 response to TCDD. In the absence of such data, it remains possible that KLF2 is induced by TCDD via an indirect AHR-mediated protein and/or lipid response. Independent of mechanism, it is plausible that nonthymocyte cell populations are also affected by AHR/KLF2 interplay. Due to the substantial role of KLF2 in determining cell phenotype, future studies should be conducted to determine if AHR/KLF2 interactions influence additional end points of TCDD toxicity and/or endogenous biology. Of particular interest is vascular physiology, wherein both the AHR and KLF2 have a central role in the transcriptional response to shear stress (33, 41, 42).
| CONCLUSIONS |
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| FOOTNOTES |
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The on-line version of this article (available at http://www.jbc.org) contains supplemental Figs. S1S4. ![]()
1 To whom correspondence should be addressed: McArdle Laboratory for Cancer Research, University of Wisconsin-Madison, 1400 University Ave., Madison, WI 53706-1599. Tel.: 608-262-1209; Fax: 608-262-2824; E-mail: bradfield{at}oncology.wisc.edu.
2 The abbreviations used are: TCDD, 2,3,7,8-tetrachlorodibenzo-p-dioxin; AHR, aryl hydrocarbon receptor; DP, double positive; SP, single positive; TCR, T cell receptor; TN, triple negative; TNX, triple negative X; PE, phycoerythrin; RT, reverse transcription; qRT, quantitative reverse transcription. ![]()
| ACKNOWLEDGMENTS |
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| REFERENCES |
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