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J. Biol. Chem., Vol. 282, Issue 39, 28566-28576, September 28, 2007
Commonality and Biosynthesis of the O-Methyl Phosphoramidate Capsule Modification in Campylobacter jejuni*
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| ABSTRACT |
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-D-GalfNAc residue, whereas Cj1422 transfers the MeOPN to C-4 of D-glycero-
-L-gluco-heptopyranose. CPS produced by the 11168H strain was found to be extensively modified with variable MeOPN, methyl, ethanolamine, and N-glycerol groups. These findings establish the importance of the MeOPN as a diagnostic marker and therapeutic target for C. jejuni and set the groundwork for future studies aimed at the detailed elucidation of the MeOPN biosynthetic pathway. | INTRODUCTION |
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The capsular polysaccharides (CPS)5 produced by C. jejuni are known to be important virulence factors that are involved in colonization and invasion (9, 10). CPS expression was shown to be necessary for diarrheal disease in ferrets, mediating mouse and chicken colonization, increasing resistance to human serum, as well as increasing adherence and invasion of human epithelial cells (9). The CPSs produced by C. jejuni are the major antigenic component of Penner's serotyping system (10). There are now more than 60 serostrains described for this bacterium. Although not every strain has been examined, it is thought that each one produces a CPS having a different structure (11, 12). Furthermore, there can be extensive phase-variable structural modifications such as the incorporation of methyl, ethanolamine, and aminoglycerol groups on CPS sugars (13-15). It is thought that these extensive modifications may allow the bacterium to evade host defenses (14, 15).
The most unusual CPS modification is the O-methyl phosphoramidate CH3OP(O)(NH2)(OR) (MeOPN) group, which is a labile phosphorylated structure. Nitrogen-phosphorus bonds are rare in nature, and we reported the first example of such a structure produced by a bacterium in the CPS of C. jejuni NCTC11168 (HS:2) (13) (Fig. 1). Since this initial study, the G1 (HS:1), NCTC12517 (HS:19) and 81-176 (HS:23/26) strains of C. jejuni have been shown to produce MeOPN (14-16) and a related structure has been identified on the lipooligosaccharide of Xanthomonas campestris, a Gram-negative plant pathogen (17). Preliminary structural analyses of CPS from different C. jejuni serotypes suggested the presence of the MeOPN modification on a diverse range of CPS sugars (18). This observation prompted us to isolate and elucidate the CPS structure from the G1 and NCTC12517 strains. The G1 CPS was subsequently shown to have a [-4)-
-D-Galp-(1-2)-(R)-Gro-(1-P]n repeating unit with two labile
-D-fructofuranose branches at C-2 and C-3 of Gal. Each fructofuranose was further substituted at C-3 with MeOPN groups (14). Similarly, the NCTC12517 CPS was shown to have a [-4)-
-D-GlcA6NGro-(1-3)-
-D-GlcNAc-(1-]n repeating unit with a labile
-L-sorbofuranose branch at C-2 of GlcA and an MeOPN at C-4 of GlcNAc (15). For both strains, the keto sugars and MeOPN groups were found to be nonstoichiometric and were hypothesized to contribute to the overall structural heterogeneity of the CPS. Furthermore, the MeOPN was found to be variably methylated in the NCTC12517 strain thereby adding additional variability to an already structurally heterogeneous CPS. Most recently, Kanipes and co-workers (16) demonstrated that the 81-176 strain also has a MeOPN CPS modification and provided evidence to show that it most likely is found at C-2 of the galactose residue.
In a recent study, the CPS biosynthetic regions for selected strains of C. jejuni were sequenced, including 176.83 (HS:41), 81-176, ATCC43456 (HS:36), CCUG10954 (HS:23), NCTC12517, and G1 (18). Comparison of the CPS sequences for the NCTC12517, 176.83, and G1 strains to the genome-sequenced NCTC11168 strain provided evidence for multiple mechanisms of CPS variation, including exchange of capsular genes by horizontal transfer, gene duplication, deletion, fusion, and contingency gene variation. Interestingly, the study uncovered the presence of a highly conserved gene cluster (cj1415-cj1420) within those strains that produce the MeOPN CPS modification (NCTC11168, NCTC12517, G1, 81-176). Because these genes have no apparent role in sugar biosynthesis and because their presence coincides with the presence of MeOPN on CPS sugars, it was hypothesized that they might be involved in MeOPN biosynthesis. Furthermore, in our recent study we demonstrated that 1H and one-dimensional 1H-31P HSQC high resolution magic angle spinning (HR-MAS) NMR can be used to quickly detect MeOPN from microliter amounts of intact bacterial cells (19).
In this study, we explore the commonality of the MeOPN modification among C. jejuni strains by using HR-MAS NMR as a rapid, high throughput means to directly examine several animal and human isolates from diverse clinical presentations and geographical locations. A chicken model was then developed to evaluate MeOPN expression within the natural avian host. Finally, genes implicated in MeOPN biosynthesis were identified by using HR-MAS NMR to compare a library of CPS mutants for the presence of MeOPN. The identity of two MeOPN transferases was then established using genetic complementation together with high resolution NMR and mass spectrometric studies of purified CPS.
| EXPERIMENTAL PROCEDURES |
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High Resolution Magic Angle Spinning (HR-MAS) NMR Spectroscopy—Bacterial cells were prepared and analyzed by HR-MAS NMR spectroscopy as described previously (13, 19). HR-MAS NMR experiments were performed using a Varian Inova 500-MHz (1H) spectrometer (Varian, Palo Alto, CA) equipped with a Varian 4-mm indirect detection gradient nano-NMR probe with a broadband decoupling coil. Samples were spun at 3 kHz, and spectra were recorded at ambient temperature (23 °C). HR-MAS NMR experiments were generally performed with suppression of the HOD signal using presaturation as described previously (13). 1H NMR spectra of bacterial cells were acquired using the Carr-Purcell-Meiboom-Gill pulse sequence (90-(
-180-
)n acquisition) to remove broad signals originating from lipids and solid-like materials (22) and were typically obtained using 256 transients (11 min). The total duration of the Carr-Purcell-Meiboom-Gill pulse (n x 2
) was 10 ms with
set to 1/MAS spin rate. One-dimensional 1H-31P HSQC spectra were acquired using the standard Varian HSQC pulse sequence with one-dimensional spectra representing the first increment of the standard HSQC experiment. All 1H NMR spectra were referenced to an internal 3-(trimethylsilyl)propionic-2,2,3,3-d4 acid sodium salt standard (
H 0.00 ppm).
Bacterial Colonization of Specific Pathogen-free Leghorn Chicks—The inoculum for each chick colonization experiment was prepared by harvesting C. jejuni 11168H cells, grown for 18 h into a 0.1 M (pH 7.4) phosphate-buffered saline solution (supplemented with 0.14 M NaCl and 0.002 M KCl). One-day-old specific pathogen-free chicks were orally gavaged with 300 µl of inoculum containing
3 x 1010 bacterial cells. Because chicks typically do not consume feed during the first 48 h after hatching (23), cecal contents were analyzed 48 h post oral gavage to minimize the amount of particulate matter within the cecal contents that could potentially interfere with HR-MAS NMR. Furthermore, only adherent bacteria should be present at 48 h post oral gavage because the rate of passage through the gastrointestinal tract of leghorns is
4 h (24). All chicks were euthanized by cervical dislocation according to the approved guidelines of the Canadian Council for Animal Care. Cecal contents were then serially plated onto Karmali agar (Oxoid, Ontario, Canada) and examined for the presence of C. jejuni and for MeOPN using HR-MAS NMR spectroscopy. In total, the cecal contents from 39 chicks were examined (13 chicks from three independent experiments).
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Complementation Studies of the cj1421/cj1422 Double Mutant—cj1421 and cj1422 were PCR-amplified using chromosomal DNA obtained from the 11168H strain and high fidelity Taq polymerase (Accuprime Taq HiFi, 95 °C 15 s, 30 cycles of 95 °C for 15 s, 55 °C for 15 s, and 68 °C for 2 min) (Invitrogen) using the primers listed in supplemental Table 2. PCR fragments containing complete gene copies were then used for complementation studies using the pRED1 integrational expression vector according to Karlyshev and co-workers (25). To produce the delivery plasmids pRR1421 and pRR1422, a 0.7-kb gfp-SwaI/XbaI fragment of pRED1 was replaced with a 1.9-kb PCR product that was digested with PmeI/XbaI. As a precaution, pRR1421 and pRR1422 were sequenced because cj1421 and cj1422 contain homopolymeric G tracts that are prone to length variation (18). Following electroporation of the delivery constructs into the appropriate mutants, complemented strains were selected on blood agar plates and supplemented with Kan (50 µg/µl) and chloramphenicol (15 µg/µl). Integration of the cmr cj1421 and cmr cj1422 gene fusions into the rRNA gene cluster on the 11168H chromosome was confirmed by PCR as described previously (25).
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High Resolution NMR Spectroscopy of Purified CPS—For NMR spectroscopy of CPS isolated from the C. jejuni 11168H wild type and the cj1421 mutant,
3 mg of pure CPS was suspended in 200 µl of 99% buffered D2O (50 mM NH4HCO3, pD 8.0) and placed in a 3-mm NMR tube. NMR experiments were performed using a Varian Inova 500 MHz (1H) spectrometer equipped with a Varian Z-gradient 3-mm triple resonance (1H, 13C, 31P) probe, or a Varian 600 MHz (1H) spectrometer equipped with a Varian 5-mm, Z-gradient triple resonance cryogenically cooled probe (cold probe). One-dimensional 31P spectra were acquired using a Varian Mercury 200-MHz (1H) spectrometer and a Nalorac 5-mm four nuclei probe. NMR experiments were typically performed at 25 °C with suppression of the HOD resonance at 4.78 ppm. Standard homo- and heteronuclear correlated two-dimensional pulse sequences from Varian were used for general assignments. Selective one-dimensional total correlation spectroscopy and NOESY experiments with a Z-filter were used for complete residue assignment as well as for measuring JH,H coupling constants and nuclear Overhauser enhancements (26, 27). Proton and carbon resonances were referenced to an internal acetone standard (
H 2.225 ppm,
C 31.07 ppm), whereas phosphorus signals were referenced to an external 85% phosphoric acid standard (
P 0.00 ppm).
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90 cm of bare-fused silica capillary (360 µm outside diameter x 50 µm inner diameter, Polymicro Technologies, Phoenix, AZ) using 15 mM ammonium acetate/ammonium hydroxide in deionized water, pH 9.0, containing 5% MeOH as the separation buffer. A voltage of 20 kV was typically applied during CE separation, and +5 kV was used as electrospray voltage. Mass spectra were acquired with dwell times of 3.0 ms per step of 0.1 m/z-1 unit in full mass scan mode using an orifice voltage of +400 V. Fragment ions formed by collision activation of selected precursor ions with nitrogen in the RF-only quadrupole collision cell were then mass-analyzed by scanning the third quadrupole.
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| RESULTS |
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H 3.77 ppm and
H 3.79 ppm with phosphorus scalar couplings of approximately JH,P 12.0 Hz (Fig. 2a, note that the partial overlap of the doublet signal from each MeOPN results in the appearance of three peaks). Signals originating from the anomeric protons of the CPS sugars
-D-Ribp (A1),
-D-GlcpA (B1),
-D-GalfNAc (C1), and D-glycero-
-L-gluco-heptopyranose (D1) were observed in agreement with the CPS structure reported for the NCTC11168 strain (Fig. 1 and Fig. 2a) (8, 13). Two anomeric signals were observed for residue C as a result of structural heterogeneity generated by the phase variable MeOPN group at C-3 of this sugar (13). Furthermore, a clear singlet was observed for the -OCH3 group (OMe) located at C-6 of residue D. In contrast, the HR-MAS 1H NMR spectrum of the cecal contents harvested from one of the C. jejuni colonized chicks was complicated by signals originating from cecal matter that overlapped with CPS signals (Fig. 2b). To specifically probe for the MeOPN, a one-dimensional, 31P decoupled, 1H-31P HSQC HR-MAS NMR experiment was used that attenuates signals from cecal matter (15, 19). Using this experiment to examine plate-grown intact cells, two clear signals could be observed originating from both MeOPN groups at
H 3.77 and 3.79 ppm (Fig. 2a, inset). In a similar fashion, analysis of the cecal contents of C. jejuni colonized chicks revealed that both MeOPN signals could be readily detected in all samples examined (see Fig. 2B, inset, for a representative spectrum).
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H 3.77 and 3.79 ppm originating from both MeOPN groups with 31P scalar couplings of approximately JH,P 12.0 Hz each (Fig. 3a). In contrast, MeOPN signals were not detected for the cj1415, cj1416, cj1417, and cj1418 mutants that clearly implicated these genes in the synthesis or transfer of MeOPN (Fig. 3, b-e). Of importance, all of the mutants examined produced CPS as indicated by the anomeric resonances that are observable within the HR-MAS 1H NMR spectra (Fig. 3, labels A1-D1). HR-MAS 1H NMR and one-dimensional 1H-31P HSQC analyses of the cj1419 and cj1420 mutants revealed signals from both MeOPN groups thereby negating a role for these genes in MeOPN biosynthesis (Fig. 3f). In contrast, spectra for the cj1421 mutant showed the loss of the MeOPN signal at
H 3.77 ppm, whereas that for cj1422 revealed the loss of the MeOPN signal at
H 3.79 ppm thereby implicating the products of these genes in MeOPN biosynthesis or transfer (Fig. 3, g-i). Based on these findings, it was concluded that cj1415, cj1416, cj1417, cj1418, cj1421, and cj1422 are involved in MeOPN biosynthesis or transfer.
Structure Elucidation of CPS Purified from C. jejuni 11168H—Compared with the CPS structure reported for the genome-sequenced NCTC11168 strain (8, 13), the HR-MAS 1H NMR spectrum for 11168H intact cells revealed important structural differences such as a novel MeOPN modification at
H 3.79 ppm (Fig. 2a). To characterize these structural differences in detail, purified CPS was investigated with NMR at 500 MHz (1H) or 600 MHz (1H) with a cold probe for optimal sensitivity (Fig. 4) and with mass spectrometry (Fig. 5).
The proton spectrum for purified 11168H CPS closely resembled that observed for intact cells in that signals originating from anomeric sugars (A1-D1) and both MeOPN groups were clearly discernible (Fig. 4a). By comparing proton and carbon chemical shift data, as well as correlation patterns obtained using total correlation spectroscopy, correlated spectroscopy, NOESY experiments (not shown), and an 1H-13C HSQC experiment (Fig. 4c) to those reported for NCTC11168 CPS (8, 13), nearly all resonances were assigned for 11168H CPS sugars (Table 2). Two individual spin systems were identified for residue C; one for C that is substituted at the 3-position with a MeOPN group (Fig. 4, labeled *C) and another where the MeOPN is absent (Fig. 4, labeled C). Because of weak signals and spectral overlap, we were able to make only partial NMR assignments for residue *C (Table 2). These observations are in good agreement with our previous work that showed the MeOPN is a phase-variable CPS modification in the NCTC11168 strain (13). A 1H-31P HMQC experiment revealed the location of the novel MeOPN group to be at C-4 of D-glycero-
-L-gluco-heptopyranose (Fig. 4b). This finding is supported by the proton chemical shifts for 11168H CPS sugars that are nearly identical to those reported for the NCTC11168 CPS (8, 13) with the exception of H-4 of residue D that is down-fielded by 0.76 ppm. This downfield shift is consistent with the effects of phosphoramidation reported for H-3 of the
-D-GalfNAc CPS sugar in the NCTC11168 strain (0.64 ppm), and H-3 of the
-D-Fruf residue in the G1 strain of C. jejuni (0.74 ppm) (8, 13, 14). Resonances observed for N-glycerol, ethanolamine, an -OCH3 group (D9) at C-6 of residue D, and a novel -OCH3 group (D8) that was determined to be located at C-3 of residue D (using heteronuclear multiple-bond correlation and HMQCTOXY experiments; data not shown), indicated that the CPS produced by the 11168H strain is structurally heterogeneous. CE-ESI-MS/MS experiments of purified 11168H CPS were used to corroborate NMR findings, and to further characterize the extent of structural heterogeneity (Fig. 5 and Table 3). Fragment ions observed at m/z 1101 and 898 confirmed the location of the novel MeOPN and -OCH3 group on residue D (Fig. 5a). Ions observed at m/z 283, 415, 549, 634, 664, 867, 884, 947, 977, and 1180 demonstrated that both MeOPN groups can be variably methylated, whereas those observed at m/z 533, 665, and 791 showed that at least one -OCH3 group is variably present on residue D. Of particular interest, CE-ESI-MS/MS of m/z 991 established that at least some repeating units within the CPS have both MeOPN groups present (Fig. 5b). Based on these results, the CPS produced by C. jejuni 11168H was concluded to be structurally heterogeneous and to have the same repeating unit as the NCTC11168 strain with the addition of a novel -OCH3 group and MeOPN group at C-3 and C-4 of D-glycero-
-L-gluco-heptopyranose, respectively (Fig. 1).
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One-dimensional, 31P-decoupled, 1H-31P HSQC HR-MAS NMR analysis of 11168H wild type cells revealed the expected signals for the MeOPN groups at C-3 of residue C (
H 3.77 ppm) and the novel MeOPN at C-4 of residue D (
H 3.79 ppm) (Fig. 6a, note that spectra shown in Fig. 6 were 31P-decoupled to eliminate 31P scalar couplings resulting in the appearance of only one peak for each MeOPN). Mutation of cj1421 resulted in the loss of the MeOPN signal at
H 3.77 ppm which suggested this gene encodes a transferase that adds the MeOPN to residue C (Fig. 6b). To ensure that other CPS structures were not affected by this mutation, the cj1421 CPS was isolated and characterized using identical techniques described for the 11168H wild type CPS (see above). NMR and mass spectrometric analyses of purified cj1421 CPS confirmed that it is structurally identical to that produced by the 11168H wild type with the exception of missing the MeOPN at the 3-position of residue C (Fig. 1, Table 2, Supplemental Table 3, and Supplemental Figs. 1 and 2). In contrast, mutation of cj1422 resulted in the loss of the signal for the novel MeOPN group at
H 3.79 ppm that indicated this gene encodes a transferase responsible for adding the MeOPN to C-4 of residue D (Fig. 6c). By comparing the chemical shifts for the anomeric protons of cj1422 CPS sugars to those reported for NCTC11168 (13), it was concluded that other CPS structures were not affected by this mutation. Interestingly, mutation of cj1421 and cj1422 resulted in the complete loss of both MeOPN modifications (Fig. 6d). Complementation of cj1421 in cis in the double mutant background resulted in restoration of the MeOPN on residue C (Fig. 3e), whereas complementation of cj1422 in cis was found to restore the MeOPN found on residue D (Fig. 3f). Based on the results of these complementation studies, cj1421 and cj1422 were concluded to encode MeOPN transferases; Cj1421 adds the MeOPNto
-D-GalfNAc, whereas Cj1422 adds the MeOPN to D-glycero-
-L-gluco-heptopyranose.
| DISCUSSION |
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The majority of the C. jejuni isolates surveyed during this study were found to express the MeOPN CPS modification. This observation points to the commonality of the MeOPNin C. jejuni and is further corroborated by whole genome microarray studies that showed 61 of the 111 C. jejuni strains tested had positive hybridization reactions for genes cj1421 and cj1422 (30). The fact that none of the 18 C. coli strains examined in this study were found to express an MeOPN indicates that the MeOPN is specific for C. jejuni. Furthermore, that the MeOPN was readily detected from the cecal contents of colonized chicks indicates that the MeOPN is expressed by C. jejuni cells inhabiting the avian gastrointestinal tract and thus could potentially be used as a diagnostic marker for C. jejuni colonization. However, MeOPN expression is not necessary for C. jejuni colonization of chicks because MeOPN mutants in both 11168H and 81-176 backgrounds colonized as well as the wild type (results not shown).
Analysis of a library of CPS mutants resulted in the identification of genes that are directly implicated in the synthesis or transfer of MeOPN. The definitive role of many of these genes remains to be established, however; BLAST searches have provided putative functions (Table 4). For example, Cj1416 shows 32% identity to LicC, a protein found in Neisseria spp., Haemophilus influenzae, and Streptococcus pneumoniae (32). The lic genes are involved in the production of phosphorylcholine, a small phosphorus-containing molecule that decorates surface glycoconjugate structures. LicC is the cytidylyltransferase that activates phosphorylcholine, and thus it is possible that Cj1416 generates a nucleotide-linked MeOPN that is then recognized by the Cj1421 and Cj1422 transferases. Conserved domain searches for Cj1417 identified a type 1 glutamine amidotransferase. Glutamine amidotransferase activity catalyzes the transfer of ammonia from the amide side chain of glutamine to an acceptor substrate. Using isotope-labeled 15NH4Cl, we previously showed that 11168H is able to incorporate exogenous ammonia into the MeOPN moiety of its CPS (19). One could imagine a role for Cj1417 in transferring ammonia to a phosphorus atom thereby forming the MeOPN. Similarly, the Cj1415 and Cj1418 proteins resemble phosphate kinases and may therefore play a key role in phosphoramidate biosynthesis.
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-D-GalfNAc, whereas Cj1422 adds the MeOPNto D-glycero-
-L-gluco-heptopyranose. The different strains that are known to express the MeOPN modification have homologues of these genes within their CPS loci (18). The NCTC12517 strain (MeOPN attached at C-4 of
-D-GlcNAcp) (15) has HS19.07, which is a cj1421 homologue; the G1 strain (MeOPN attached at C-3 of
-D-Fruf sugars) (14) also has a cj1421 homologue, whereas the 81-176 strain (MeOPN attached at C-2 of
-D-Galp) (16) has HS23/36.07, which is a cj1422 homologue. cj1421 and cj1422, as well as other genes within the CPS biosynthesis loci, were shown to undergo phase variation because of the presence of homopolymeric tracts (21). This phase variability explains much of the structural heterogeneity within the CPS structures produced by C. jejuni and also why the NCTC11168 strain expresses only one MeOPN despite having the genetic potential to express both MeOPN groups.
In this study, we have shown that the second MeOPN group is located at C-4 of D-glycero-
-L-gluco-heptopyranose in the 11168H strain. The MeOPN groups are important sources of structural heterogeneity because they are variably methylated and because one or two MeOPN groups can be present within one repeat of the CPS. Based on the signals originating from the MeOPN groups on the cell surface that appeared in a 1:1 ratio (Fig. 2a), it can be concluded that there is an equal number of each MeOPN group within the 11168H CPS. In light of the variably methylated MeOPNs on
-D-GalfNAc and/or D-glycero-
-L-gluco-heptopyranose, variable N-glycerol or ethanolamine groups on
-D-GlcpA, and two variable -OCH3 groups on D-glycero-
-L-gluco-heptopyranose, the 11168H strain produces the most decorated and structurally heterogeneous CPS reported for C. jejuni. Using the visual molecular dynamics software (33), we constructed a model for the repeating unit of the CPS produced by the 11168H strain. As can be seen, these extensive CPS modifications would be prominent structural features on the cell surface (Fig. 7, darker color). One may infer that these CPS decorations contribute unique properties in terms of overall cell surface charge or surface epitopes and are of significance during host-pathogen interactions. Interestingly, when we first identified the MeOPN modification in C. jejuni, we demonstrated that a variant expressing this modification was less reactive with the heat-labile typing sera than the wild type strain without the MeOPN (13). This suggests that either the MeOPN group was not expressed on the surface of the HS:2 serostrain used for rabbit immunizations or that the presence of the MeOPN group prevents antibody recognition of the CPS.
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| FOOTNOTES |
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The on-line version of this article (available at http://www.jbc.org) contains supplemental Tables 1-3 and Figs. 1 and 2. ![]()
1 Recipient of funding from Dr. H. Jennings. ![]()
2 Both authors contributed equally to this work. ![]()
3 To whom correspondence may be addressed. Tel.: 613-993-5900; Fax: 613-952-9092; E-mail: harold.jarrell{at}nrc-cnrc.gc.ca. 4 To whom correspondence may be addressed. Tel.: 613-990-1569; Fax: 613-952-9092; E-mail: christine.szymanski{at}nrc-cnrc.gc.ca.
5 The abbreviations used are: CPS, capsular polysaccharide; MeOPN, O-methyl phosphoramidate CH3OP(O)(NH2)(OR); CE-ESI/MS, capillary electrophoresis electrospray ionization mass spectrometry; HMQC, heteronuclear multiple-quantum coherence; HMQCTOXY, heteronuclear multiple-quantum coherence total correlation spectroscopy; HR-MAS NMR, high resolution magic angle spinning nuclear magnetic resonance spectroscopy; HSQC, heteronuclear single-quantum coherence; NOESY, nuclear Overhauser effect spectroscopy; Kan, kanamycin. ![]()
| ACKNOWLEDGMENTS |
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| REFERENCES |
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