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J. Biol. Chem., Vol. 282, Issue 5, 3188-3195, February 2, 2007
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From the Department of Pharmaceutics, University of Washington, Seattle, Washington 98195
Received for publication, October 5, 2006 , and in revised form, November 20, 2006.
| ABSTRACT |
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| INTRODUCTION |
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We recently discovered an interesting functional divergence in the equilibrative nucleoside transporter (ENT) family, SLC29. The human and rodent genomes encode four SLC29 isoforms, SLC29A14. SLC29A13, known as ENT13, are nucleoside transporters that specifically transport nucleosides (e.g. uridine, adenosine, etc.) and their structural analogs (4, 5). ENT1 and ENT2 play important roles in nucleoside salvage pathways, regulation of adenosine signaling, and cellular disposition of anticancer and antiviral nucleoside analogs (4, 5). ENT3 is an intracellular nucleoside transporter, which may play a role in lysosomal transport of nucleosides (6). The fourth member, SLC29A4, was originally identified as ENT4 and was expected to function as a nucleoside transporter (7). However, our recent cloning and characterization work clearly showed that SLC29A4 functions as a polyspecific organic cation transporter that transports prototype organic cations (e.g. 1-methyl-4-phenylpyridinium (MPP+), tetraethylammonium, and biogenic amines) but minimally interacts with nucleosides or nucleoside analogs (8, 9). Because its typical endogenous substrates are monoamine neurotransmitters (e.g. dopamine, serotonin), we have proposed a functional name, plasma membrane monoamine transporter (PMAT), for SLC29A4 (9). The substrate selectivity of PMAT is strikingly similar to that of the organic cation transporters (OCTs) in the SLC22 family (1013). In humans, PMAT may play a role in regulating central nervous system homeostasis of monoamine neurotransmitters (9, 14), as well as in tissue-specific transport of organic cations (8, 15).
The unique substrate selectivity of PMAT in the SLC29 family has brought up intriguing questions: why does PMAT behave so differently from the ENTs (i.e. ENT13) and is PMAT structurally related to the ENTs or to the OCTs? At the protein level, human and rodent PMATs exhibit a low overall sequence identity (
20%) to the ENTs (9) (Table 1), which is on the borderline of classifying a transporter into a specific gene family. However, in the TM regions, sequence identity between PMAT and the ENTs significantly increases (up to 3540%), and PMAT does not show significant sequence homology to other known gene families (9). Its sequence identity to the OCTs is only 1114% (Table 1). Moreover, PMAT and ENTs both possess an 11-transmembrane topology (9, 16). Finally, Barnes et al. (17) recently showed that PMAT also transports adenosine at acidic pH. These data suggest an intrinsic relationship in protein structure between PMAT and the ENTs. In this study, we investigated the molecular determinants and structural elements underlying the unique substrate selectivity of PMAT in the SLC29 family.
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| EXPERIMENTAL PROCEDURES |
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Generation of Chimeric and Mutant ConstructsTo facilitate the determination of membrane localization, chimeras and mutants were constructed using yellow fluorescence protein (YFP)-tagged wild type (WT) PMAT and hENT1 as templates. The WT PMAT and hENT1 cDNAs (9) were subcloned into the YFP vector pEYFP-C1 (Clontech, Palo Alto, CA) using the BglII/XbaI and BglII/KpnI sites, respectively. To construct chimeras T16 and T711, an internal EcoRI site of hENT1 in the loop region between TM6 and 7 was used. An engineered EcoRI site was introduced into WT PMAT cDNA by site-directed mutagenesis, and chimeras were generated using a method described by Wang and Giacomini (18). To generate additional chimeras with smaller replacement, an engineered site was introduced into both WT human PMAT and hENT1. Junctions in all chimeras were made within homologous regions. No foreign amino acid was introduced to any of the chimera constructs. For site-directed mutagenesis, mutants were generated using the QuikChange kit (Stratagene) as described previously (19). The sequence of each chimera and mutant was confirmed by DNA sequencing in the Department of Biochemistry at the University of Washington.
Stable Expression in MDCK CellsYFP-tagged chimera and mutant constructs were transfected into MDCK cells using a Lipofectamine (Invitrogen) method as previously described (9, 15). Stably transfected cell lines were obtained by culturing cells in minimal essential medium containing 10% fetal bovine serum and G418 (1000 µg/ml). Empty pEYFP-C1 vector was transfected into MDCK cells to obtain the control cell line. After 23 weeks selection, fluorescence-positive cells were purified by a FACS Vantage SE sorter (BD Biosciences) at the Cell Analysis Center at the University of Washington Health Science Center. The sorted cells were cultured and maintained in minimal essential medium containing G418 (200 µg/ml).
Confocal Fluorescence MicroscopyTo determine the cellular localization of YFP-tagged chimeric and mutant transporters, 106 cells were grown in two-well Lab-Tek borosilicated coverglass chambers (Nalge Nunc International Corp.) and visualized with a Leica Spectral confocal microscope equipped with a krypton/argon laser as the light source. Images were captured by excitation at 488 nm and emission at 610640 nm.
Functional Characterization in MDCK CellsStably transfected MDCK cells were plated in 24-well plates and allowed to grow for 3 days. Transport assays were performed at 37 °C in Krebs-Ringer-Henseleit buffer (5.6 mM glucose, 125 mM NaCl, 4.8 mM KCl, 1.2 mM KH2PO4, 1.2 mM CaCl2, 1.2 mM MgSO4, 25 mM HEPES, pH 7.4) containing a 3H-labeled ligand. [3H]5-HT (5-hydroxy-[1,2-3H]tryptamine creatinine sulfate, 27.1 Ci/mmol) and [3H]dopamine (3,4-dihydroxy-[2,5,6-3H]phenylethylamine, 59.7 Ci/mmol) were from PerkinElmer Life Sciences, Inc. [3H]MPP+ (39.3 Ci/mmol) and [3H]uridine ([5,6-3H]uridine, 30.0 Ci/mmol) were from American Radiolabeled Chemicals, Inc. (St. Louis, MO). Uptake was terminated by washing the cells three times with ice-cold Krebs-Ringer-Henseleit buffer. Cells were then solubilized and the radioactivity was quantified by liquid scintillation counting. Protein content in each uptake well was measured using a BCA protein assay kit (Pierce) and the uptake in each well was normalized to its protein content. In all studies, cells transfected with an empty vector were served as a background control. Transporter-specific uptake was calculated by subtracting the background uptake in vector-transfected cells.
Isolation of Plasma Membrane Proteins by Cell Surface BiotinylationConfluent cells were washed twice with 3 ml of ice-cold phosphate-buffered saline/CM (pH 8.0). Biotinylation was carried out on ice by incubation with 1 ml of ice-cold phosphate-buffered saline/CM containing a membrane-impermeable biotinylation reagent NHS-SS-biotin (0.5 mg/ml). After two successive 20-min incubations on ice with freshly prepared NHS-SS-biotin and gentle shaking, cells were briefly rinsed with 3 ml of phosphate-buffered saline/CM containing 100 mM glycine. Cells were then incubated on ice with the same solution for 20 min to ensure complete quenching of the unreacted NHS-SS-biotin. Cells were then solubilized on ice by incubating in 400 µl of lysis buffer (10 mM Tris, 150 mM NaCl, 1 mM EDTA, 0.1% SDS, 1% Triton X-100, protease inhibitors phenylmethylsulfonyl fluoride, 200 µg/ml, leupeptin, 3 µg/ml, pH 7.4) for 1 h. Fifty microliters of streptavidin-agarose beads was then added to the supernatant to isolate cell membrane protein, which are subjected to Western blot using a mouse monoclonal anti-yellow fluorescent protein antibody (JL-8) (BD Biosciences) with 1:1000 dilution, followed by horseradish peroxidase-conjugated goat anti-mouse IgG (1:20,000 dilution).
Helical Wheel AnalysisThe helical wheel was generated using the Wisconsin Package version 10.3-UNIX as described before (19). The transmembrane domain is assumed to be a standard
-helix (3.6 residues/helical turn). Each residue in TM is plotted every 100° around the center of a circle. The projection of the positions of the residues was shown on a plane perpendicular to the helical axis. Hydrophobicity and hydrophilicity are assigned according to the consensus scale of Eisenberg et al. (20).
Data AnalysisAll uptake experiments were performed in triplicate and repeated three times. Data were expressed as mean ± S.D. Statistical significance was determined by Student's t test, and the kinetic parameters were determined by nonlinear least squares regression fitting as described previously (8).
| RESULTS |
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1.52-fold) transport activity. Mutants E242A and T220A exhibited reduced transport activity that was about 30% of the WT PMAT. In contrast, mutants D107A, D154A, D163A, E206A, and D336A completely lost transport activity toward all three tested substrates. Cellular Localization of Alanine MutantsThe observed change in the uptake activity of an alanine mutant could be due to a change in intrinsic transport activity or an alteration of cell surface expression levels of the functional transporter. To distinguish these two circumstances, confocal microscopy was used to visualize the cellular localization of all tested alanine mutants (Fig. 4). For mutants D91A, E128A, T220A, E227A, E242A, and E375A, which retained full or partial transport activity, a predominant plasma membrane localization pattern was observed (Fig. 4). Mutants D107A, D154A, D163A, and D336A, which are not functional in MDCK cells, displayed altered cellular localization. D154A and D336A were localized intracellularly to perinuclear membrane network, indicating that substitutions with alanine affected PMAT trafficking to the plasma membrane. The other two mutants, D107A and D163A, showed diffused fluorescence throughout the cytoplasm, which was similar to the distribution of YFP. Western blot analysis revealed degraded protein products in cells expressing D107A and D163A (data not shown), suggesting that the alanine substitutions at these two positions may have affected protein stability. Most importantly, mutant E206A, which showed complete loss of transporter activity (Fig. 3), exhibited normal plasma membrane expression (Fig. 4). These data suggest that unlike D107A, D154A, D163A, and D336A, the loss of function in the E206A mutant is not caused by protein trafficking or stability problems, but rather is due to a defect in transport activity.
Role of Glu206 in the Interactions with MPP+ and Monoamine NeurotransmittersTo further investigate the role of Glu206 in PMAT interactions with cationic substrates, three additional mutants, E206Q, E206D, and E206R, were constructed and stably expressed in MDCK cells. All mutants exhibited plasma membrane expression patterns similar to that of the WT PMAT (Fig. 5a). Cell surface biotinylation followed by Western analysis with anti-yellow fluorescent protein antibody also revealed comparable membrane expression of the 75-kDa YFP-tagged fusion protein in all Glu206 mutant cell lines (Fig. 5b). Functional analysis showed that elimination of the negative charge (E206Q) or switching to a positively charged residue (E206R) resulted in complete loss of transporter activity (Fig. 6). In contrast, substitution of Glu206 with a charge-conserved residue (E206D) generated a fully functional transporter (Fig. 6) with similar transport efficiency toward various cationic substrates (Table 2). These data strongly suggest that the negative charge at position 206 is essential for the transport function of PMAT, and organic cation binding to PMAT may involve electrostatic interaction with Glu206.
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2-fold increase in uridine uptake as compared with WT PMAT (Fig. 7a). In marked contrast, the E206D mutant, which retained PMAT activity toward cationic substrates (Fig. 6), showed no activity toward uridine (Fig. 7a). In addition, other plasma membrane-expressed PMAT mutants (e.g. D91A and T220A), which carry the equivalent ENT1 residues, showed no uptake activity toward uridine (data not shown). These data provided further evidence that Glu206 plays an essential role for the cation selectivity of PMAT, and this negatively charged residue may serve as a filter to exclude uncharged molecules such as the nucleosides. However, when its equivalent residue in ENT1, Gln180, was replaced with Glu or Asp, the resulting mutants behaved like WT ENT1, transporting uridine (Fig. 7b) but not MPP+ (data not shown). These data suggest that whereas Glu206 is essential for the cation selectivity in PMAT, changing the equivalent residue in ENT1, Gln180, to a negatively charged residue is not sufficient to make ENT1 accommodate an organic cation as a substrate. Effect of Mutations at Thr220The above study identified that Glu206 in TM5 is essential for the cation selectivity of PMAT. Another residue, Thr220, whose alanine mutant showed reduced transport activity toward organic cations, is also located in TM5. Compared with WT PMAT, the plasma membrane expression level of T220A did not decrease as suggested by both confocal microscopy imaging and cell surface biotinylation and Western analysis (Figs. 4 and 5). Therefore, the reduced activity of this mutant indicates that Thr220 may also participate in interactions with substrates. To further elucidate the functional role of Thr220, we generated two additional mutants, T220S and T220I. The serine (Ser) mutation conserved the hydroxyl group of threonine (Thr) but shortened the side chain by one carbon length. The isoleucine (Ile) mutation eliminated the hydroxyl group and also increased the side chain volume. When stably expressed in MDCK cells, both mutants exhibited plasma membrane expression (Fig. 5a) with cell surface expression levels comparable with that of WT PMAT (Fig. 5b). Like T220A, T220S exhibited a significantly decreased activity (Fig. 6). Kinetic analysis of T220A and T220S mutants showed that the reduced activity was mainly due to a decrease in Vmax (Table 2), suggesting that substitution of Thr220 may have affected the turnover rates of the transporter. Mutant T220I exhibited normal plasma membrane localization but had no uptake activity toward all three tested substrates, suggesting that substitution of Thr220 by a bulky side chain abolished transporter activity (Fig. 6).
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| DISCUSSION |
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Our observation that chimera T16 maintained the substrate specificity of PMAT (Fig. 1) provides strong evidence that TM16 contains the key domains for substrate recognition/translocation. Whereas it is possible that some TMs in the C-terminal half of PMAT may also participate in the formation of the substrate permeation pathway, the functional property of chimera T16 suggested that the major site(s) determining the organic cation selectivity is located within TM16. The importance of this region is further supported by our mutagenesis data, which identified that key residues for substrate recognition are located in TM5. Our data are consistent with results from chimeric studies of the ENTs, which also showed that the N-terminal half (TM16) of ENT1 and -2 contains critical domains for substrate/inhibitor recognition (21, 22). Together, these results indicate that despite the distinct substrate selectivity and low sequence homology, PMATs and the ENTs share a similar protein modular organization. In contrast, a series of studies on the OCTs suggested that the C-terminal half of the OCTs play a more important role in substrate selectivity (2426). Thus, despite the large similarity in substrate selectivity shared by PMAT and OCTs, the structural mechanisms governing their organic cation transport functions may be fundamentally different.
To further identify key residues in PMAT, we employed a site-directed mutagenesis approach based on multiple sequence alignment. We mainly focused on negatively charged residues (Glu or Asp) because we have previously demonstrated that carrying a positive charge is essential for a compound to be recognized by PMAT (8). Of the 33 negatively charged Glu or Asp in PMAT, 10 residues were selected for mutational analysis based on multiple sequence alignment with the ENTs. Of these 10 candidate residues, only Glu206 was identified to be essential for the organic cation transport activity of PMAT. Other residues were either not absolutely required for the transport activity (Asp91, Glu128, Glu227, Glu242, and Glu375) or appeared to have affected membrane trafficking (Asp107 and Asp163) or protein stability (Asp154 and Asp336). In contrast, changing Glu206 to Gln, Ala, or Arg led to a complete loss of organic cation transport activity without affecting plasma membrane expression (Figs. 4, 5, 6). Furthermore, changing Glu206 to a charge conserved residue (Asp) restored organic cation transport activity (Fig. 6). More interestingly, whereas mutant E206Q, which possesses the equivalent residue in ENT1, completely lost transport activity toward MPP+, it gained the ability to transport the ENT substrate, uridine (Fig. 7a). These results strongly suggest that Glu206 is essential for the cation selectivity of PMAT and may function as the charge sensor for cationic substrates. Recently, Barnes et al. (17) reported that PMAT is able to transport adenosine, a nucleoside, at acidic pH. Because adenosine can be protonated at the nitrogen atom in the imidazole ring at low pH, this may "camouflage" adenosine to be cationic and recognized by residue Glu206.
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Both Glu206 and Thr220 are located on TM5, suggesting that this TM is a key component of the substrate permeation pathway. The importance of TM5 is further supported by helical wheel analysis, which revealed a distinct amphipathic pattern and suggested that one side of TM5 may face an aqueous pore for substrate recognition and translocation. Residues Glu206 and Thr220 are located in the center of the hydrophilic face, and their side chains may protrude into the pore and interact with the substrates. However, we have no experimental evidence regarding how the TM helices are packed to form the substrate permeation pathway. Therefore, the exact role of TM5 in substrate recognition and translocation requires further investigation.
In summary, our studies revealed the key structural and molecular elements that underlie the transport function of PMAT. Furthermore, the integrated information gained from our study provides unique insights into the structure and function relationships of transporters in the SLC29 family.
| FOOTNOTES |
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1 Supported in part by a predoctoral fellowship from the Eli Lilly and Company Foundation. ![]()
2 Present address: Merck KGaA, Institute of Drug Metabolism and Pharmacokinetics, Am Feld 32, D-85567 Grafing, Germany. ![]()
3 To whom correspondence should be addressed: H272J, Health Sciences Bldg., Seattle, WA 98195-7610. Tel.: 206-221-6561; Fax: 206-543-3204; E-mail: jowang{at}u.washington.edu.
4 The abbreviations used are: SLC, solute carrier; PMAT, plasma membrane monoamine transporter; ENT, equilibrative nucleoside transporter; OCT, organic cation transporter; YFP, yellow fluorescent protein; MPP+, 1-methyl-4-phenylpyridinium; MDCK, Madin-Darby canine kidney; WT, wild type. ![]()
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