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Originally published In Press as doi:10.1074/jbc.M710288200 on February 25, 2008
J. Biol. Chem., Vol. 283, Issue 17, 11625-11632, April 25, 2008
Amino Acid Residues That Confer High Selectivity of the 6 Nicotinic Acetylcholine Receptor Subunit to -Conotoxin MII[S4A,E11A,L15A]*
Layla Azam 1,
Doju Yoshikami , and
J. Michael McIntosh
From the
Departments of Biology and Psychiatry, University of Utah, Salt Lake City, Utah 84112
Received for publication, December 18, 2007
, and in revised form, February 15, 2008.
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ABSTRACT
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Nicotinic acetylcholine receptors (nAChRs) containing 3 and β2 subunits are found in autonomic ganglia and mediate ganglionic transmission. The closely related 6 nAChR subtype is found in the central nervous system where changes in its level of expression are observed in Parkinson's disease. To obtain a ligand that discriminates between these two receptors, we designed and synthesized a novel analog of -conotoxin MII, MII[S4A,E11A,L15A], and tested it on nAChRs expressed in Xenopus oocytes. The peptide blocked chimeric 6/ 3β2β3 nAChRs with an IC50 of 1.2 nM; in contrast, its IC50 on the closely related 3β2 as well as non- 6 nAChRs was three orders of magnitude higher. We identified the residues in the receptors that are responsible for their differential sensitivity to the peptide. We constructed chimeras with increasingly longer fragments of the N-terminal ligand binding domain of the 3 subunit inserted into the homologous positions of the 6 subunit, and these were used to determine that the region downstream of the first 140 amino acids was involved. Further mutagenesis of this region revealed that the 6 subunit residues Glu-152, Asp-184, and Thr-195 were critical, and replacement of these three residues with their homologs from the 3 subunit increased the IC50 of the peptide by >1000-fold. Conversely, when these key residues in 3 were replaced with those from 6, the IC50 decreased by almost 150-fold. Similar effects were seen with other 6-selective conotoxins, suggesting the general importance of these 6 residues in conferring selective binding.
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INTRODUCTION
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Nicotinic acetylcholine receptors (nAChRs)2 are members of the large family of Cys-loop ligand-gated ion channels (1). They are pentameric proteins composed of subunits alone (homopentamers) or in combination with β subunits (heteropentamers). In the case of the heteromeric receptors, different combinations of and β subunits yield receptors with different pharmacological and electrophysiological properties (2). To date, nine and three β subunits have been discovered and cloned from mammalian nervous tissue. Of these, 2 through 6 can form receptors in combination with β2 through β4, leading to a large assortment of different receptor subtypes.
The 6 subunit has a limited distribution within the brain, largely being expressed by catecholaminergic neurons (3, 4) at presynaptic endings where its activity modulates release of dopamine (5, 6) and norepinephrine (7). Chronic exposure to nicotine has been shown to selectively affect the expression and function of nAChRs on striatal dopaminergic terminals containing this subunit (8-10). Furthermore, 6 nAChRs appear to play a role in the pathophysiology of Parkinson's disease, a disease involving the loss of dopaminergic neurons. In animal models of Parkinson's disease, 1-methyl 4-phenyl 1,2,3,6-tetrahydropyridine-induced injury of dopaminergic neurons is associated with a selective loss of 6*3 nAChRs in both rodents and monkeys (10-12). In addition, there is selective loss of 6 nAChRs in human Parkinson's disease. Thus, ligands that selectively target 6β2* nAChRs potentially represent a novel class of therapeutic agents (13).
However, it is difficult to pharmacologically distinguish 3β2 from 6β2* nAChRs due to the close structural similarities of the subunits. 3β2* nAChRs are found on peripheral autonomic ganglia where they modulate cardiac and enteric functions (14, 15). Therapeutic agents targeting CNS 6β2* nAChRs would need to be devoid of activity on 3β2 nAChRs to avoid cardiovascular and intestinal side effects. -Conotoxin (CTX) MII, a 16-amino acid peptide, is the signature ligand for 6β2* nAChRs; however, -CTX MII also blocks 3β2 nAChRs with high affinity (16). This is not surprising, given the overall high sequence homology between 6 and 3 subunits and the conservation of residues responsible for interaction with -CTX MII (17). In this study, we created a novel ligand, based on -CTX MII, that discriminates between 6/ 3β2β3 and 3β2 nAChRs by a factor of 1000 ( 6/ 3 is a chimera that contains the N-terminal binding region of the 6 subunit and the remaining fragment of the 3 subunit, see "Experimental Procedures"). We constructed receptor chimeras and mutants and determined the non-homologous residues near the ligand binding sites of 6 and 3 that are responsible for this selectivity. The results of the present study provide insight into the nAChR-ligand interaction and may aid in development of 6* nAChR-selective therapeutics.
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EXPERIMENTAL PROCEDURES
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Materials—Acetylcholine chloride, atropine, and bovine serum albumin were obtained from Sigma. -CTXs were synthesized as described previously (16, 18, 19). Clones of 2- 7 and β2-β4 cDNAs were kindly provided by S. Heinemann (Salk Institute, San Diego, CA). Clones of β2 and β3 subunits in the high expressing pGEMHE vector were kindly provided by Chuck Luetje (University of Miami, Miami, FL). cDNA clones encoding rat 9 and 10 were provided by Belen Elgoyhen (Universidad de Buenos Aires, Argentina).
Construction of Chimeras—Chimeras were made by PCR using the primer sequences shown in Table 1. Because the 6 subunit does not form functional receptors, we used a functional surrogate formed by splicing the N-terminal extracellular ligand-binding region of the 6 subunit with the remaining fragment of the 3 subunit as previously described (19). Hence, all chimeras of 6 used in this study had portions of the N-terminal ligand-binding region of the 6 subunit replaced with the corresponding region of the 3 subunit. The notation for these chimeras is the length of the 3 sequence at the N-terminal portion, followed by the remaining 6/ 3 sequence, which makes up the C-terminal portion. Primers were designed to amplify each length of the extracellular region of the 3 subunit plus a 25-bp 3'-overhang homologous to the remaining extracellular region of the 6 subunit. Similarly, each 6/ 3 subunit fragment was amplified that contained a 25-bp 5'-overhang homologous to the 3 subunit. Amplifications of the 3 and 6/ 3 fragments were carried out by using Taq DNA polymerase (Promega, Madison, WI). Each corresponding 3 and 6/ 3 PCR fragment (containing the overhangs) was first hybridized and subsequently extended by PCR, using primers specific for a 5'-segment of the 3 sequence (containing an NotI site: 5'-AAGGAAAAAAGCGGCCGCGACATGGGTGTTGTGCTGCTC-3') and a 3'-segment of the 6/ 3 sequence (containing an XbaI site: 5'-GTCCATCTAGACACAGGTGAGCCTCGATG-3'), using PfuTurbo DNA polymerase (Stratagene, La Jolla, CA). The amplified 31-x 6/ 3 PCR products were cloned into pT7TS plasmid (a modified pGEM4Z plasmid containing a 5' anda3' Xenopus globin untranslated region), using the NotI and SpeI sites. The ligated products were transformed into either DH10B or HB101 competent cells and grown overnight, and the cDNA was isolated using a miniprep kit (Qiagen, Valencia, CA) and subsequently sequenced.
Construction of Point Mutations—Point mutants were made by PCR using primers shown in Table 1. Primers containing the desired point mutation flanked by 15 bases on either side were synthesized. Using the non-strand displacing action of PfuTurbo DNA polymerase, the mutagenic primers were extended and incorporated by PCR. The methylated, non-mutated parental cDNA was digested with DpnI. The mutated DNA was transformed into DH10B or DH5 competent cells and isolated using the Qiagen miniprep kit and sequenced to ascertain the incorporation of the desired mutation.
cRNA Preparation and Injection—Capped cRNA for the various subunits were made using the mMessage mMachine in vitro transcription kit (Ambion, Austin, TX) following linearization of the plasmid. The chimeras/point mutants made from the original 6/ 3 chimera were linearized with SalI, and point mutants originally made from the 3 subunit were linearized with EcoRI, and transcribed with T7 and SP6, respectively. The cRNA was purified using an RNeasy kit (Qiagen). The concentration of cRNA was determined by absorbance at 260 nm. cRNA of each chimera and point mutant were combined with cRNA of high expressing β2 and β3 subunits (in the pGEMHE vector) to give 167-500 ng/µl of each subunit cRNA. 100 nl of this mixture was injected into each Xenopus oocyte with a Drummond microdispenser (Drummond Scientific, Broomall, PA), as described previously (16), and incubated at 17 °C. Oocytes were injected within 1 day of harvesting, and recordings were made 2-4 days post-injection.
Voltage Clamp Recording—Oocytes were voltage-clamped and exposed to ACh and peptide as described previously (16). Briefly, the oocyte chamber consisting of a cylindrical well ( 30 µl in volume) was gravity-perfused at a rate of 2 ml/min with ND-96 buffer (96.0 mM NaCl, 2.0 mM KCl, 1.8 mM CaCl2, 1.0 mM MgCl2, 5 mM HEPES, pH 7.1-7.5) containing 1 µM atropine and 0.1 mg/ml bovine serum albumin. In the case of the 9 10 subtype, the ND96 contained no Mg2+ and no atropine, and the oocytes were incubated in 1,2-bis(2-aminophenoxy)ethane-N,N,N',N'-tetraacetic acid tetrakis (acetoxymethyl ester) for 3-4 h prior to recording. The oocyte was subjected once a minute to a 1-s pulse of 100 µM ACh. For screening of receptor chimeras and mutants, for toxin concentrations of 1 µM and lower, once a stable baseline was achieved, either ND-96 alone or ND-96 containing varying concentrations of the -conotoxins was perfusion-applied, during which 1-s pulses of 100 µM ACh were applied every minute until a constant level of block was achieved. For toxin concentrations of 10 µM and higher, the buffer flow was stopped and the toxin was bath-applied and allowed to incubate with the oocyte for 5 min, after which the ACh pulse was resumed.
ACh Dose Response—To acquire ACh dose-response data, the conventional oocyte chamber was replaced by a chamber constructed from a disposable 200-µl polypropylene pipette tip with a length of 50 mm and an internal diameter of 0.5 mm at the upstream or intake end and 5 mm at the downstream or exhaust end. The chamber was mounted horizontally with its intake end connected to the perfusion supply, while its exhaust end had a vertical meniscus whose location was dictated by the tip of a sipper made from a 27-gauge hypodermic needle connected to a vacuum line. The chamber had two apertures in its dorsal wall: 1) a 1.5-mm circular hole centered 13 mm downstream from the intake, and 2) a 2.5 x 5 mm (longitudinal) oval centered 14 mm downstream from the hole (i.e. a total of 27 mm from the intake end). The oocyte was introduced into the chamber through the oval aperture and secured against the chamber floor by the two voltage clamp glass microelectrodes that impaled the oocyte. The chamber was perfused at a rate of 2 ml/min. To introduce ACh into the chamber, the perfusion was halted and 20 µl of ACh was manually applied to the chamber via the small circular hole upstream from the oocyte. This volume was too small for ACh to reach the oocyte unless the perfusion was resumed. Upon resumption of perfusion (which was started immediately following the introduction of ACh into the chamber), the bolus of ACh rapidly engulfed the oocyte and washed past it in a matter of seconds, as judged by the time course of ACh response. This process was repeated with different concentrations of ACh with a time interval between applications long enough to avoid desensitization.
Data Analysis—For the baseline response, at least three ACh responses were averaged. To determine the percent block induced by toxin, two to three ACh responses, obtained after a steady-state block had been achieved, were averaged, and the value was divided by the pre-toxin baseline value to yield a % response. The dose-response data were fit to the equation, Y = 100/(1 + 10^((log EC50 - log [Toxin]) x nH where nH is the Hill coefficient, by non-linear regression analysis using GraphPad Prism (GraphPad Software, San Diego, CA). Each data point is mean ± S.E.M. from at least three oocytes. For ACh dose-response curves, the response to a given ACh concentration was normalized to the response to 100 µM ACh, which served as an internal control.
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RESULTS
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-CTX MII[S4A,E11A,L15A] Is a Selective Antagonist of 6* nAChRs— -CTX MII is a two-disulfide bridge peptide with the sequence, GCCSNPVCHLEHSNLC-amide. It has high, but similar, potency in blocking both 6β2- and 3β2-containing nAChRs (IC50 values of 0.39 and 2.2 nM, respectively (19)). Structure-function studies of -conotoxin MII indicate that several of the non-Cys residues are less important for activity against 6 versus 3 nAChRs (19). We replaced three of these residues, Ser-4, Glu-11, and Leu-15, with Ala and tested them against heterologously expressed 3β2 and 6/ 3β2β3 nAChRs. Because the 6 subunit does not form functional receptors, we used a functional surrogate formed by splicing the N-terminal extracellular ligand-binding region of the 6 subunit with the remaining fragment of the 3 subunit. The pharmacology of this chimera has previously been shown to match that of native 6β2* nAChRs for -CTX MII binding (19). The combined Ala substitutions resulted in a peptide with >600-fold lower activity against 3β2 nAChRs but only 3-fold lower activity against 6/ 3β2β3 nAChRs compared with native -CTX MII (Table 2). Thus, the resulting analog has >1000-fold preference for 6/ 3β2β3 over 3β2 nAChRs (Table 2). The rate of recovery from block was slower for 6/ 3β2β3 than for 3β2 nAChRs (Fig. 1). A 1-min wash was sufficient for recovery of 3β2 nAChRs, whereas full recovery of 6/ 3β2β3 nAChRs required a 5-min wash. Table 2 also shows the effect of -CTX MII[S4A,E11A,L15A] on other subtypes of rat nAChRs.
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TABLE 2 IC50 values for block of various rat nAChR subtypes by -CTX MII[S4A, E11A, L15A]
CI, confidence interval; nH, Hill coefficient.
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Amino Acids Downstream of the First 140 Residues of the N-terminal Region of the 6 Subunit Confer the High Preference of -CTX MII[S4A,E11A,L15A] for 6/ 3β2β3 versus 3β2 nAChR—The N-terminal binding region (NTR) of 6 and 3 nAChR subunits displays 80% homology (Fig. 2). To determine the residues responsible for the differential interaction with the peptide, a series of chimeras were constructed, each with a progressively longer fragment of the NTR of the 6 subunit replaced by the corresponding region of the 3 subunit. Replacing the first 140 amino acids of the 6 subunit with the 3 subunit ( 31-140 6/ 3) did not affect the IC50 (Table 3). However, replacing the first 160 residues ( 31-160 6/ 3) decreased the potency of the toxin by 50-fold (Table 3), suggesting interaction of the toxin with amino acids located between residues 140 and 160 of the 6 NTR. Replacing an additional 10 amino acids of the 6 subunit with the 3 subunit ( 31-170 6/ 3) changed the susceptibility to the peptide only slightly. However, exchanging the first 180 amino acids ( 31-180 6/ 3; 24 amino acids shy of the entire NTR) further shifted the IC50 of the toxin toward that of the WT 3β2 nAChR (Table 3). These results suggest that amino acids downstream of the first 140 residues of the 6 subunit confer the high selectivity of -CTX MII[S4A,E11A,L15A] for 6/ 3β2β3 nAChRs.
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TABLE 3 IC50 values for -CTX MII[S4A,E11A,L15A] on different chimeras
CI, confidence interval; nH, Hill coefficient.
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Glu-152, Asp-184, and Thr-195 of 6 Subunit Interact with -CTX MII [S4A,E11A,L15A]—Spanning the region between residues 140 and 160 of the NTR are 5 amino acids that differ between the 6 and the 3 subunits (Fig. 2). To determine which residues of the 3 subunit should be substituted into the 6 subunit, the NTR of both 3 and 6 subunits were aligned with that of the 4 subunit, which does not show affinity for the -CTX MII analog (Fig. 2). Of the five residues that differ between the 6 and 3 subunits in the first 140-160 amino acids, three are shared by both 3 and 4 subunits (Met-141, Lys-152, and Val-156) and one is different in all three (Leu-157 in 3, which is a Ser in 4 and an Ile in 6). When each of these 3 residues was systematically substituted for the corresponding residue in 6, the 6Glu-152 substitution with Lys created the most substantial rightward shift in the dose-response curve, decreasing the potency of the -CTX MII[S4A,E11A,L15A] for the 6/ 3β2β3 mutant receptor by 8-fold relative to that of the WT receptor (Table 4).
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TABLE 4 IC50 values for -CTX MII[S4A,E11A,L15A] on mutant nAChRs
CI, confidence interval; nH, Hill coefficient. The three residue changes that have the largest effect on the IC50, and were subsequently changed simultaneously, are shown in bold.
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The next stretch of amino acids that affected potency of -CTX MII[S4A,E11A,L15A] was located in the region downstream of the first 170 amino acids (Table 3). Once again, residues that differed between the 6 and the 3 subunits, but were common to the 3 and the 4 subunits, were exchanged. There are 8 amino acids that differ between the 6 and 3 subunits in the region between residues 170 and 204 (Fig. 2). Although 6Val-176 (Ile in 3), 6Asp-177 (Lys in 3) and 6Phe-201 (Leu in 3) differ in the two subunits, they are shared by the 6 and 4 subunits and therefore were not examined. Of the eight different residues, only one is shared by 3 and 4 subunits (Gly-171). However, substituting this residue for Ser found in the 6 NTR did not markedly affect the susceptibility of the receptor to toxin. As for the remaining residues, only substitutions of 6Asp-184 to Glu and 6Thr-195 to Gln decreased the receptor's susceptibility to -CTX MII[S4A,E11A,L15A], by 8-fold and 9-fold, respectively (Table 4). When the three residues that markedly affected the potency of the -CTX MII analog were simultaneously changed ( 6E152KD184ET195Q/ 3), the IC50 of -CTX MII[S4A,E11A,L15A] for the triple receptor mutant was approximately equal to the IC50 obtained for the WT 3β2 receptor (Table 4 and Fig. 3A).

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FIGURE 4. ACh dose response on WT and mutant receptors. Both mutant receptors exhibited similar sensitivity to acetylcholine relative to their WT counterparts. Values are mean ± S.E.M. from five to eight separate oocytes.
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To ascertain whether the decreased toxin susceptibility of the 6E152KD184ET195Q/ 3 mutant involved changes in ACh affinity, ACh dose-response curves were obtained for the WT and mutant receptors. ACh activated the WT and mutant receptors with similar potencies, with an EC50 of 7.7 µM (95% CI: 5-12 µM) and 14 µM (95% CI: 12-16 µM) for the WT and mutant receptor, respectively (Fig. 4).
Next, the critical residues identified in the 6 subunit were substituted into 3 to assess for gain of function with respect to toxin susceptibility. Residues Glu-152, Asp-184, and Thr-195 of 6 were substituted for the homologous residues in the 3 subunit NTR. The resulting 3 mutant, designated as 3K152EE184DQ195T, was co-expressed with β2 subunit in oocytes. The 3K152EE184DQ195Tβ2 nAChR was 150-fold more sensitive to -CTX MII[S4A,E11A,L15A] compared with WT 3β2 nAChR (Table 4 and Fig. 3B), with no change in ACh sensitivity (EC50 on 3β2, 87 µM (CI: 62-121 µM); EC50 on 3K152EE184DQ195Tβ2, 64 µM (CI: 30-137 µM)) (Fig. 4).
6 Residues Glu-152, Asp-184, and Thr-195 Interact with Other 6-Selective -Conotoxins—We next investigated whether the identified residues were critical for the interaction with other 6*-selective conotoxins, specifically -CTX PIA and -CTX MII analogs -CTX MII[H9A,L15A] and -CTX MII[E11A]. When tested on 6E152KD184ET195Q/ 3β2β3, all three peptides were less potent against the mutant than the WT 6/ 3β2β3 nAChR (Table 5 and Fig. 5). Similarly, when tested on the mutant 3K152EE184DQ195Tβ2 nAChR, all three -conotoxins were more potent in blocking the mutant than the WT 3β2 nAChR, although the gain in sensitivity was much less for -CTX PIA than for the -CTX MII analogs (Table 5 and Fig. 5).
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TABLE 5 IC50 values for block by -CTX PIA, -CTX MII[H9A,L15A] and -CTX MII[E11A] of WT and mutant nAChRs
Numbers in parentheses are 95% confidence intervals.
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Positive Charge at Position 152 Disfavors Interaction of the 3 Subunit with -CTX MII[S4A,E11A,L15A]—Among the residues that affected the potency of -CTX MII [S4A,E11A,L15A], there is a charge reversal, from Glu-152 in 6 to a Lys-152 in 3; the residue exchange caused an 8-fold reduction in the potency of the peptide for the 6/ 3 subunit. To determine whether this change in potency was due to a charge reversal or to a change in the side-chain length, 6Glu-152 was systematically replaced with an Arg, Gln, or Met. The Arg mutation retains the charge reversal, but has a longer side chain, whereas Gln replacement retains the side-chain length of Glu, but eliminates the negative charge. Met has a straight side chain, similar to Lys, but is not charged. As with the 6E152K/ 3 mutant, the 6E152R/ 3 mutant had a lower sensitivity to -CTX MII[S4A,E11A,L15A] (IC50:23nM (95% CI: 19-29 nM)) (Fig. 6). Both 6E152Q/ 3 and 6E152M/ 3 mutations only slightly changed the IC50 of the analog relative to the WT receptor, with IC50 values of 5.9 nM (95% CI: 5.0-7.0 nM) and 4.3 nM (95% CI: 3.5-5.5 nM), respectively (Fig. 6).
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DISCUSSION
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We have designed and synthesized a novel, high affinity ligand that discriminates between the closely related 6/ 3β2β3 and 3β2 nAChRs. The new peptide is a triple mutation of -CTX MII, with Ala substituted at positions 4, 11, and 15. The parent peptide, -CTX MII, does not distinguish well between 3β2 and 6/ 3β2β3 nAChRs. Conversely, the Ala-substituted peptide retained activity against 6/ 3β2β3 nAChR, but dramatically lost activity against 3β2 nAChR, i.e. compared with -CTX MII, the new peptide is only 3-fold less active against 6/ 3β2β3 nAChRs but 1700-fold less active against 3β2 nAChRs. These changes shift the selectivity ratio (IC50 3β2:IC50 6/ 3β2β3) of 5.6 for the parent peptide to >1000 for the mutant, clearly indicating that the receptors can be well differentiated (Table 1).
Amino acid residues that determine the high potency of -CTX MII for the 3 subunit were previously characterized and are Lys-185 and Ile-188 (17). However, both of these residues are conserved between the 3 and the 6 subunits, which helps explain the similar high affinity of -CTX MII for 6/ 3β2β3 and 3β2 nAChRs. In this study, receptor mutagenesis was used to assess the residues in the extracellular region of the 6 versus the 3 subunit that confer selectivity of the new peptide -CTX MII[S4A,E11A,L15A] for the 6 subunit. These amino acids include Glu-152, Asp-184, and Thr-195. Receptors with 6 subunits in which all three residues were simultaneously exchanged with analogous residues of the 3 subunit had a >1000-fold higher IC50 for -CTX MII[S4A,E11A,L15A]. Conversely, replacing residues in 3 with the three key 6 residues increased sensitivity for -CTX MII[S4A,E11A,L15A] by 150-fold.

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FIGURE 6. Positive charge in position 152 adversely affects toxin binding. Replacement of Glu-152 with Arg reduced activity of -CTX MII[S4A,E11A,L15A] by 19-fold. In contrast, substitution of Glu-152 by Gln or Met did not have a large effect on potency. Values are mean ± S.E. from three to five oocytes.
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FIGURE 7. Side view of a single subunit of the Aplysia AChBP (Protein Data Bank ID: 2BYP), with the C-loop shown in the "open" orientation as found when bound to an -CTX. A, the position of the homologous residues in the 6 subunit (purple) that interact with MII[S4A,E11A,L15A] were determined by alignment of the N-terminal extracellular region of 6 with a subunit of the Aplysia AChBP. The numbers in parentheses indicate numbering according to Aplysia AChBP. The box indicates the region that is enlarged in B-D. B, the residues that interact with acetylcholine (numbering according to Aplysia AChBP) are shown in red (the "aromatic cage"), and the residues of the 6 subunit that interact with -CTX MII[S4A,E11A,L15A] are shown in purple. C, the residues of the Aplysia AChBP that interact with -CTX PnIA(A10L and D14K) are shown in green (from ref. 21), and the residues of the 6 subunit that interact with -CTX MII[S4A,E11A,L15A] are shown in purple. D, the residues of the Aplysia AChBP that interact with -CTX ImI are shown in blue (from ref. 27), and the residues of the 6 subunit that interact with -CTX MII[S4A,E11A,L15A] are shown in purple.
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Recent crystallographic structures of ACh binding proteins (AChBP) from Lymnea stagnalis, Aplysia californica, and Bulinus truncatus, which are used to model the nAChR in its ligand-bound state, as well as the high resolution structure of the Torpedo nAChR in the closed state, have aided greatly in understanding the ligand binding domain of nAChRs, and the structural changes that follow agonist and/or antagonist binding (20-23). The structures consist of an N-terminal -helix, two-short 310 helices, and a core of 10 β-sheets, β1-β10. An "aromatic cage" that forms the ACh binding pocket consists of loops A-F, with loops A-C belonging to the principal part (or the subunit in case of muscle and neuronal nAChRs) and loops D-F belonging to the complementary part (the β subunit, in neuronal heteromeric nAChRs) (20, 23). It has been proposed that upon agonist (e.g. ACh) binding, loop C moves in a counterclockwise motion, closing on the agonist like a "hinge," thus capping and trapping the agonist (23-26). However, binding of an antagonist would lock the C-loop in an open (i.e. resting) conformation and prevent opening of the channel. The change in the C-loop conformation has been confirmed in high resolution crystal structures of -CTX PnIA[A10L,D14K] and -CTX ImI bound to AChBP from A. californica (21, 27).
Lys-185 and Ile-188, the two residues in the 3 subunit that interact with -CTX MII (17), both reside in the β9 strand that precedes the C-loop, as determined from sequence comparison with both the Lymnea and Aplysia AChBPs (22, 27). Similarly, two of the residues that confer high selectivity of -CTX MII[S4A,E11A,L15A] for the 6 subunit, Asp-184 and Thr-195, are in the β9 and β10 strands, respectively, the former precedes and the latter follows the C-loop (Fig. 7). Therefore, subtle differences in the geometry of the C-loop may affect toxin binding. 3Gln-195 has previously been shown to interact with -CTX PnIA and -bungarotoxin, which block 3β2 nAChRs (28, 29). In addition, an Ile at this position in the Aplysia AChBP is involved in interaction with -CTX ImI (27). The present study, however, indicates that -CTX MII[S4A,E11A,L15A] prefers a Thr at this position, as found in the 6 ligand binding domain. Gln and Thr both have polar, but uncharged side chains. However, the side chain of Gln is longer than that of Thr. Therefore, it is possible that the slightly longer side chain of Gln-195 sterically hinders the binding of -CTX MII[S4A,E11A,L15A] to the 3β2 nAChR. Similarly, Glu at position 184 of the 3 subunit may sterically hinder binding of the -CTX MII analog, because the shorter Asp at this position, as found in the 6 subunit, favors the binding of the toxin.
The other residue in the 6 subunit that was found to influence the binding of -CTX MII[S4A,E11A,L15A], Glu-152, although not directly in the β9-β10 sheets, lies in close proximity (Fig. 7). Additionally, this residue, which is in a homologous position to that of Glu-151 in the A. californica AChBP, has been shown to be critical for binding of the PnIA variant -CTX PnIA[A10L,D14K] (21). Both the 3 and the 4 subunits, which are not sensitive to -CTX MII[S4A,E11A,L15A], have a Lys at the homologous position. When the negatively charged 6Glu-152 is replaced with positively charged Lys or Arg, the resulting mutant is 8 and 19-fold, respectively, less sensitive to -CTX MII[S4A,E11A,L15A], suggesting that either the negative charge might be important for conferring high selectivity to the toxin, or that introduction of a positive charge might be unfavorable to binding of the toxin. To address the former possibility, 6Glu-152 was replaced with the isosteric, but uncharged Gln. This substitution caused an 5-fold decrease in sensitivity to -CTX MII[S4A,E11A,L15A], thus suggesting that the negative charge may have a role in conferring the high affinity of the toxin to the 6 subunit. To address the possibility that the introduction of a positive charge may be unfavorable, 6Glu-152 was replaced with Met, which is structurally similar to Lys but lacks the positive charge. This substitution caused a 3.5-fold decrease in the potency of the analog, as opposed to 8- and 19-fold decrease when either a Lys or Arg is present (see above), thus suggesting that the positive charge may contribute to the unfavorable interaction with the -CTX MII[S4A,E11A,L15A].
In conclusion, we have created a high affinity MII analog that, unlike the parent peptide, is highly selective for 6/ 3β2β3 over 3β2 nAChRs. Through receptor mutagenesis we have identified amino acid residues in the 6 subunit that are responsible for the differences in toxin affinity between these receptors. Considering the location of these residues with respect to residues that interact with ACh (Fig. 7B), it is likely that -CTX MII[S4A,E11A,L15A] acts competitively to antagonize ACh binding. These residues are distinct from those previously determined as important to -CTX MII interaction with the 3 subunit (17, 29) and provide further information for distinguishing among these structurally related nAChRs that have distinct roles in the peripheral and central nervous systems.
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FOOTNOTES
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* This work was supported by Kirschstein-National Research Service Award Postdoctoral Fellowship DA 016835 (to L. A.) and by National Institutes of Health Grant MH53631 (to J. M. M.) and Grant GM48677 (to D. Y.). The costs of publication of this article were defrayed in part by the payment of page charges. This article must therefore be hereby marked "advertisement"in accordance with 18 U.S.C. Section 1734 solely to indicate this fact. 
1 To whom correspondence should be addressed: Dept. of Biology, University of Utah, 257 South 1400 East, Salt Lake City, UT 84112. Tel.: 801-581-5907; Fax: 801-585-5010; E-mail: layla_azam{at}yahoo.com.
2 The abbreviations used are: nAChR, nicotinic acetylcholine receptor; AChBP, acetylcholine-binding protein; CTX, conotoxin; NTR, N-terminal binding region; CI, confidence interval. 
3 Asterisk indicates presence of additional subunits. 
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ACKNOWLEDGMENTS
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We thank Dr. Pradip Bandyopadhyay and Dr. Grzegorz Bulaj for helpful discussions.
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