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J. Biol. Chem., Vol. 283, Issue 46, 31763-31775, November 14, 2008
Synaptotagmin C2B Domain Regulates Ca2+-triggered Fusion in VitroCRITICAL RESIDUES REVEALED BY SCANNING ALANINE MUTAGENESIS*
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| ABSTRACT |
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| INTRODUCTION |
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Syt 1 is localized to synaptic vesicles and large dense-core granules in neurons and neuroendocrine cells and is thought to function as a Ca2+ sensor for rapid synchronous release of neurotransmitter (3). Structurally, syt 1 consists of a short luminal tail, a single transmembrane domain, and a cytosolic region comprising two C2 domains, C2A and C2B, connected by a short linker (4). In response to binding Ca2+, both C2 domains of syt 1 partially penetrate into lipid bilayers that contain anionic phospholipids such as phosphatidylserine (PS) (5–7); these interactions play a critical role during membrane fusion (8). In addition, syt 1 binds to the t-SNAREs, syntaxin and SNAP-25, in a Ca2+-regulated manner (9–11), and these interactions are also thought to play a role in excitation-secretion coupling (3, 8, 11, 12), although this point is not universally accepted (13–15). An early model, bolstered by more recent data, indicates that syt 1 might act as a switch by clamping fusion under resting conditions and then accelerating fusion in response to Ca2+ (3, 16, 17).
Reconstitution experiments, using vesicles that harbor syb and vesicles that harbor syntaxin-SNAP-25 heterodimers, demonstrated that SNAREs are sufficient to mediate membrane fusion in vitro. However, fusion was slow and relatively inefficient (18). Addition of the cytosolic domain of syt 1 (C2AB), to the in vitro SNARE-mediated fusion assay, conferred Ca2+ sensitivity to the reaction and increased the rate and efficiency of fusion (17, 19). It was further demonstrated that C2AB was able to drive assembly of SNAP-25 onto membrane-embedded syntaxin, resulting in SNARE complexes that are competent to drive membrane fusion (20). These data demonstrate that Ca2+·C2AB is able to influence the structure and function of SNAREs and that C2AB is able to directly couple Ca2+ influx to vesicle fusion.
There are apparent disparities between data obtained from cell-based model systems as opposed to reconstituted fusion assays, relating to the relative importance that each C2 domain of syt 1 plays during fusion. Several studies concluded that the C2B domain, but not the C2A domain, is critical for syt 1 function in neurons. For example, mutations that completely abolish the Ca2+-sensing ability of C2A appear to have little effect on synaptic transmission, whereas similar mutations in C2B completely disrupt function (21–24). Moreover, deletion of the C2B domain dramatically reduced secretion in Drosophila mutants, and a point mutation in this domain shifted the Ca2+ dose response to the right (25). Finally, substitution of basic resides within C2B results in diminished t-SNARE binding activity and synaptic transmission (11, 26, 27). Although cell-based experiments indicate that C2B is the major determinant that enables syt to regulate fusion, in all published studies, the isolated C2B domain had no effect in the reconstituted fusion assay (19, 28, 29).
A second question concerns the interaction of syt 1 with SNARE proteins. Initial studies, as well as recent biophysical measurements, mapped this interaction largely to the C2B domain of syt 1 (30, 31). However, this is not a completely resolved issue, as others have suggested that isolated C2A mediates the t-SNARE-binding activity of syt 1 (32, 33). Indeed, a recent study used zero-length cross-linking between SNAP-25 and C2AB to identify residues within C2A that mediated Ca2+-dependent binding (12). In addition, neutralization of the positively charged residues R233Q and K366Q in the Ca2+-binding membrane penetration loops of C2A and C2B, respectively, reduce binding of C2AB to membranes and SNAP-25, indicating that these residues may make contacts between both the SNAREs and membranes during vesicle fusion (34). The emerging view is that both C2 domains participate in interactions with t-SNAREs, but C2B plays a more significant role in binding (3).
Other than the handful of domain mapping studies summarized above, relatively little is known regarding the precise interfaces that mediate the interaction of syt with t-SNAREs. High resolution structures for the C2 domains of syt 1, and for the core of the SNARE complex, have been determined, thus providing a framework to address this question via in-depth mutagenesis and modeling (35–37).
In this study, we demonstrate for the first time that the isolated C2B domain of syt 1 is able to drive Ca2+-dependent membrane fusion in the reconstituted SNARE-mediated fusion assay; isolated C2A had little effect. C2B-regulated fusion was strictly dependent upon the presence of PE in the reconstituted vesicles; PE also dramatically increased the rate of fusion regulated by C2AB. To further refine the regions in C2AB that are important for regulated fusion, we carried out scanning alanine mutagenesis of residues within both the C2A and C2B domains. This analysis revealed several mutations within the C2B domain of syt 1 that reduced Ca2+-dependent liposome fusion. In particular, Arg-398, which lies at the opposite end of C2B as the membrane penetration loops, appears to play an important role in syt-t-SNARE interactions and membrane fusion. Together, these results highlight the role of C2B in SNARE-catalyzed Ca2+-dependent fusion and identify a new region of C2B that is critical for syt 1 function during fusion.
| EXPERIMENTAL PROCEDURES |
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Protein Expression and Purification—To generate His-tagged syb and t-SNARE heterodimers, Escherichia coli were grown at 37 °C to an A600 of 0.8, and protein expression was induced with 0.4 mM isopropyl 1-thio-β-D-galactopyranoside. Four hours after induction the bacteria were collected by centrifugation, and the pellet was resuspended in resuspension buffer (25 mM HEPES-KOH, 400 mM KCl, 20 mM imidazole, and 5 mM 2-mercaptoethanol). Resuspended bacteria were subjected to sonication (2 x 45 s, 50% duty cycle). Triton X-100 (2%), protease inhibitors (1 mg of aprotinin, pepstatin, and leupeptin; 0.5 mM phenylmethylsulfonyl fluoride), and 0.1 mg/ml RNase and DNase were added to the sonicated material, and the mixture was incubated for 2–3 h with rotation at 4 °C. Insoluble material was removed by centrifugation (Beckman JA17 rotor, 17K rpm), and the supernatant was applied to a Ni2+ column using an AktaFPLCTM (GE-Amersham Biosciences). The column was washed extensively with resuspension buffer containing 1% Triton X-100 and then 1% n-octylglucoside wash buffer (25 mM HEPES-KOH, 400 mM KCl, 50 mM imidazole, 10% glycerol, 5 mM 2-mercaptoethanol, 1% n-octylglucoside). The bound protein was eluted using n-octylglucoside wash buffer with 500 mM imidazole.
For the C2AB point mutants, E. coli were grown as above, however, following addition of isopropyl 1-thio-β-D-galactopyranoside bacteria were grown for an additional 4 h at 30 °C. Bacteria were collected by centrifugation, resuspended in His6 buffer (25 mM HEPES-KOH, 500 mM NaCl, 20 mM imidazole), and sonicated as mentioned above. Samples were incubated with 1% Triton X-100 and protease inhibitors for 1 h followed by centrifugation to remove the insoluble material. The supernatant was incubated with Ni2+-Sepharose HP beads overnight. The following day, the Ni2+ beads were washed with 20 volumes of His6 buffer containing 1 M NaCl, 20 volumes His6 buffer supplemented with 0.1 mg/ml RNase and DNase, and eluted with 1.5 volumes of elution buffer (25 mM HEPES-KOH, 500 mM NaCl, 500 mM imidazole). Eluted protein was dialyzed against 50 mM HEPES-KOH, 150 mM NaCl, and 10% glycerol.
For glutathione S-transferase-tagged proteins, E. coli were grown as described above for the point mutants. However, they were resuspended in phosphate buffered-saline containing 10% glycerol and 1 mM dithiothreitol. Bacteria were sonicated, treated with Triton X-100, and protease inhibitors. Insoluble material was removed as described. The supernatant was collected, and incubated overnight at 4 °C with glutathione-Sepharose beads with rotation. Beads were washed extensively with phosphate buffered-saline (10% glycerol, 1 mM dithiothreitol) containing 0.1 mg/ml RNase and DNase, and the protein was removed by thrombin cleavage (50 units/ml of bead slurry for 2 h at 20 °C). The supernatant was collected and treated with phenylmethylsulfonyl fluoride to inactivate the thrombin.
All proteins were analyzed by SDS-PAGE and stained with Coomassie Blue to determine the purity and concentration against a bovine serum albumin standard curve. The concentration of C2A, C2B, and C2AB was verified using a BCA protein assay kit compatible with reducing agents.
Protein Reconstitution—Vesicles were prepared as described previously (19). Briefly, lipids supplied in chloroform were combined in various molar ratios (t-SNARE vesicles: 15% PS, 30% PE, 55% PC; v-SNARE vesicles: 15% PS, 27% PE, 55% PC, 1.5% NBD-PE, 1.5% Rhodamine-PE), dried under a stream of nitrogen, and subjected to vacuum for >1 h. Proteins to be reconstituted were diluted in elution buffer to yield
100 copies per vesicle. Syb was diluted to 0.19 mg/ml and the syntaxin·SNAP-25 complex was diluted to 0.8 mg/ml in elution buffer. The dried lipid film was solubilized using these respective protein mixes and subsequently diluted with reconstitution buffer (25 mM HEPES-KOH, 100 mM KCl, 10% glycerol, 1 mM dithiothreitol). Protein-free vesicles were prepared as described above; however, the protein was omitted.
Vesicles were dialyzed against reconstitution buffer overnight, changing the buffer once. The dialyzed vesicles were collected, mixed with 80% Accudenz, and transferred into ultra clear centrifuge tubes. A step gradient was prepared by addition of 30 and 0% Accudenz layers onto the vesicle layer. The samples were centrifuged at 41,000 rpm for 5 h (SW-41 rotor) or 55,000 rpm for 1.75 h (SW-55 rotor). Vesicles were collected from the 0–30% interface and analyzed by SDS-PAGE to verify protein incorporation.
Fusion Assays and Data Analysis—Fusion assays were carried out in white-bottom 96-well plates with total reaction volumes of 75 µl. Each reaction contained 45 µl of t-SNARE vesicles or protein-free vesicles, 5 µl of NBD-Rhodamine-labeled v-SNARE vesicles, and 1.5 µl of 10 mM EGTA. C2AB, C2A, or C2B were added to each reaction as indicated in the figures. Samples were preincubated at 37 °C for 20 min followed by injection of 5 µl of 18 mM Ca2+ to give a final concentration of 1 mM free Ca2+. Following Ca2+-injection fluorescence intensity was monitored for 60 min at 37 °C using a BioTek Synergy HT plate reader equipped with 460/40 excitation and 530/25 emission filters. The maximum fluorescence signal was obtained by addition of 25 µlof n-dodecyl β-D-maltoside to each reaction well; samples were monitored for an additional 30 min until a stable baseline was obtained.
The fusion data were normalized by setting the initial time point to 0% and the maximal fluorescence signal in detergent to 100%. All graphs and plots were generated and analyzed using Prism 4.0 software (GraphPad, Inc.).
Co-flotation and Assembly Assays—100-µl reactions were prepared containing 50 µM C2A or C2B or 10 µM C2AB, 45 µl of either t-SNARE heterodimer, syntaxin alone, or protein-free vesicles, 2 µl of 10 mM EGTA, and reconstitution buffer in the presence or absence of 1 mM free Ca2+. Components were incubated at room temperature for 30 min with shaking. Following incubation, the vesicles were mixed with 100 µl of 80% Accudenz (with or without Ca2+), transferred to ultra clear centrifuge tubes, and layered with 35%, 30%, and 0% Accudenz (with or without Ca2+) to form a step gradient. Gradients were centrifuged in a SW-55 rotor (55,000 rpm, 1.75 h), and 40 µl of vesicles was collected at the 0–30% interface and analyzed by SD-SPAGE and Coomassie staining or immunoblotting. Samples to be immunoblotted were transferred to nitrocellulose by the semi-dry method, nonspecific sites were blocked with 3% nonfat dry milk, and proteins were probed for with the indicated primary antibodies (diluted 1:1,000 in 1% nonfat dry milk) and a goat-anti mouse horseradish peroxidase-linked secondary antibody (diluted 1:20,000 in 1% nonfat dry milk). Blots were incubated with enhanced chemiluminescent substrate and exposed to film.
PS Binding Assays—Mutant syt 1 C2AB-glutathione S-transferase fusion proteins were expressed and purified as described above using glutathione-Sepharose beads, however, the protein was not eluted by thrombin cleavage. Sepharose beads containing 10 µg of bound protein were incubated with protein-free liposomes (15% PS, 29.25% PE, 55% PC, and 0.75% Rhod-aminePE) in the presence or absence of Ca2+ for 15 min with gentle agitation. All buffers contained 0.2 mM EGTA and Ca2+ concentrations were prepared from a 100 mM stock solution (Thermo Electron Corp, Beverly, MD) using WebMaxC (www.stanford.edu/~cpatton/webmaxcS.htm). Next, beads were washed three times with reconstitution buffer with the corresponding Ca2+ concentration. Bound liposomes were solubilized by addition of reconstitution buffer with 1% Triton X-100. The fluorescence intensity was measured using a BioTek Synergy HT plate reader equipped with 530/25 excitation and 590/35 emission filters. The resulting fluorescence was normalized to the maximum intensity as determined by nonlinear regression. The [Ca2+]
and Hill slope for each mutant were determined by fitting the normalized data with sigmoidal dose-response curves.
Dynamic Light Scattering—Phospholipid vesicles (15% PS, 30% PE, 55% PC) were prepared by drying the phospholipids under a stream of nitrogen, subjected to vacuum for >2 h, and suspended in HEPES-buffered saline (50 mM HEPES, pH 7.4, 0.1 M NaCl, 10% glycerol, 1 mM dithiothreitol). Small unilamellar liposomes were prepared using a mini-extruder (Avanti Polar Lipids) with a 50 nm pore size membrane (Whatman). Dynamic light scattering experiments were performed on an N4 plus Submicron Particle Size Analyzer (Beckman Coulter, Inc.), with a scattering angle of 90°. Data were analyzed with PCS software. Liposomes (0.05 mM phospholipids) were mixed with either 4 µM or 10 µM protein in HEPES-buffered saline. Samples were loaded into a cuvette, and all of the experiments were thermostatically controlled at 22 °C. To determine the kinetics of vesicle aggregation, the particle size in the lipid-protein mixture was estimated at 305, 535, 765, 995, 1225, and 1455 s after the addition of 1 mM Ca2+ or 0.2 mM EGTA. Particle size was measured again after addition of 5 mM EGTA.
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| RESULTS |
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Soluble C2AB, C2A, or C2B fragments of syt 1 were incubated with v- and t-SNARE vesicles for 20 min at 37 °C followed by injection of a Ca2+ bolus to give a final concentration of 1 mM (arrow). Consistent with previous work, PS was found to be an essential cofactor for C2AB-mediated fusion (20); vesicles composed of either 100% PC or 30% PE/70% PC did not support Ca2+-triggered fusion (Fig. 1B, left panels). C2AB was able to regulate fusion between vesicles composed of 15% PS/85% PC, however, this fusion was slow, and isolated C2A and C2B were without effect, as previously reported (19, 28, 29). PE was then included in the lipid mixture of the artificial vesicles to more closely mimic the endogenous synaptic vesicle and plasma membrane lipid composition (39, 40). PE itself, in the absence of syt 1, had a slight inhibitory effect on basal SNARE-mediated fusion. In contrast, inclusion of PE markedly increased the kinetics of C2AB-regulated fusion; the initial rate of fusion, upon addition of Ca2+, was increased >9-fold (Fig. 1B, right panels). Interestingly, PE also unmasked a previously unobserved regulatory activity mediated by the isolated C2B domain. C2B alone was able to clamp fusion in EGTA and to accelerate fusion in response to Ca2+. To our knowledge this is the first evidence for the autonomous function of C2B during membrane fusion in vitro (Fig. 1B).
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We note that syt 1 C2AB can bind to vesicles via interactions with either t-SNAREs or PS (19). Therefore, to selectively examine t-SNARE-binding activity, these experiments included vesicles that harbored t-SNAREs but lacked PS. Vesicles were incubated with either 10 µM C2AB, or 50 µM C2A or C2B, and floated through a density gradient (Fig. 1C). C2AB and isolated C2B, but not the isolated C2A domain, bound to PS-free t-SNARE vesicles in a Ca2+-dependent manner. Protein-free vesicles, for each lipid mixture, were run in parallel; C2AB, C2A, and C2B co-floated with vesicles that contained PS in response to Ca2+, consistent with the PS-binding activity of each fragment. Importantly, C2AB, C2A, or C2B failed to co-float with vesicles that lacked both t-SNARE heterodimers and anionic phospholipids (i.e. PS, data not shown); thus, none of these syt 1 fragments exhibited detectable PE-binding activity. These data confirm that, in our co-flotation assay, C2AB and isolated C2B, but not isolated C2A, assemble into readily detectable complexes with t-SNAREs via interactions that are strengthen by Ca2+ (30). Given the nature of the co-sedimentation assay, we cannot rule out a weak interaction of the isolated C2A domain with SNAREs, and we reiterate the finding that, when tethered to C2B, C2A acts to increase the affinity of syt 1 for syntaxin and SNAP-25 (11, 19, 30, 41).
The Isolated C2B Domain Exhibits Both Stimulatory and Fusion-clamping Activities—Titration experiments were performed to determine if C2A or C2B could give rise to similar levels of fusion as C2AB. In response to Ca2+, C2B drove fusion almost as efficiently as C2AB, but the EC50 for the isolated C2 domain (EC50 = 30.6 ± 1.0 µM) was 6-fold greater than for the tethered C2 domain fragment of syt (EC50 = 5.2 ± 1.1 µM). In contrast, even at the highest concentration of C2A tested, stimulation was not observed (Fig. 2A). We conclude that, although C2B is necessary and sufficient to regulate fusion, a tethered, adjacent C2A enhances the function of C2B.
In addition to Ca2+-stimulated fusion activity, the ability of each domain to inhibit basal SNARE-mediated fusion in EGTA was also analyzed. The IC50 values for C2AB, C2A, and C2B were 4.3 ± 1.5 µM, > 100 µM, and 9.8 ± 1.3 µM, respectively (Fig. 2B). So, although high concentrations of isolated C2A were ineffective at regulating Ca2+-triggered fusion, this domain did exhibit a slight ability to clamp SNARE-mediated fusion in the presence of EGTA, but only at concentrations
30 µM. This finding suggests that, in the absence of Ca2+, C2A might weakly interact with t-SNAREs causing an inhibition of basal SNARE-mediated fusion. Interestingly, the clamping activity of C2B was reduced only 2-fold as compared with C2AB. This is in marked contrast to the Ca2+-triggered activity of syt, where C2AB was 6-fold more effective than C2B. Therefore, although isolated C2B can clamp fusion under resting conditions and accelerate fusion in response to Ca2+, an adjacent C2A domain facilitates both of these activities, especially the activation of fusion.
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To confirm our observation that PE does not affect the ability of C2AB or C2B to bind t-SNAREs (Fig. 1), additional flotation assays were performed. PS-free t-SNARE vesicles containing 0, 10, 20, 30, 40, and 50% PE were incubated with 10 µM C2AB or 50 µM C2B in the absence or presence of Ca2+. Both C2AB and C2B bound t-SNAREs equally well at all PE concentrations tested (Fig. 3B). Protein-free vesicles were run in parallel, and no significant binding of either C2AB or C2B was detected (data not shown). Together with the data from Fig. 1, these results suggest that PE might affect a step immediately preceding fusion but after C2AB or C2B have bound to t-SNAREs.
To determine whether PE exerts its effect on C2B-regulated membrane fusion by acting at either the t- or v-SNARE membrane, experiments were carried out in which PE was omitted from each population of vesicles. When PE was omitted from the v-SNARE membrane, C2AB retained
74% of its maximal efficiency. In contrast, when PE was omitted from the t-SNARE vesicles alone, or both v- and t-SNARE vesicles together, only
32% of the maximal efficiency was retained (Fig. 3C). Thus, PE in the t-SNARE membrane largely mediates the enhanced rate and efficiency of fusion in the presence of Ca2+ and C2AB. This finding is consistent with previous studies indicating that syt acts on the target membrane to regulate fusion (7, 17).
Similar experiments were carried out for the isolated C2B domain, but with different results. Omission of PE from either the v- or t-SNARE vesicle alone resulted in a marked decrease in the rate and efficiency of C2B-regulated fusion; in either case, only
30% of the maximal extent of fusion persisted (Fig. 3C). The retention of some C2B activity, when PE is present in either the t- or v-SNARE membranes, indicates that PE is still able to enhance Ca2+-triggered fusion. However, unlike C2AB, optimal fusion activity of C2B requires PE in both t- and v-SNARE vesicle populations.
The Isolated C2B Domain of syt 1 Drives Assembly of SNAP-25 onto Membrane-embedded Syntaxin—A recent study demonstrated that C2AB drives assembly of functional t-SNARE heterodimers (20). To test whether the isolated C2B domain exhibits this activity, C2B was incubated with soluble SNAP-25 and membrane-embedded syntaxin in either EGTA or Ca2+ (supplemental Fig. S2). Under our assay conditions, little binding of SNAP-25 to membrane-embedded syntaxin was observed (18, 20). However, addition of 50 µM C2AB or C2B drove the assembly of SNAP-25 onto reconstituted syntaxin in a Ca2+-dependent manner (supplemental Fig. S2, B and C); hence, isolated C2B does "work" on SNARE proteins. In contrast, the isolated C2A domain (50 µM) was unable to assemble SNAP-25 onto syntaxin.
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15% at 100 µM C2A). In contrast, when C2A was titrated against 50 µM C2B, 90% of fusion was blocked by 100 µM C2A (Fig. 4B). These data suggest C2A might compete for binding sites on t-SNARE vesicle; however, preliminary experiments indicate that C2A cannot displace C2B from the fusion complex (data not shown). These findings raise the possibility that C2A co-assembles into fusion complexes to reduce their activity. Further biochemical characterization is needed to test this hypothesis. Scanning Alanine Mutagenesis of the Cytosolic Domain of syt 1—We next carried out scanning alanine mutagenesis to identify surfaces of syt 1 that may participate in regulated membrane fusion. Increased ionic strength disrupts syt 1-t-SNARE interactions (11, 43); therefore, we limited our mutations to charged residues that would affect electrostatic interactions. Also, given the newly discovered autonomous function of C2B, most of our mutations were focused on this domain. In total, 42 point mutants (10 in C2A and 32 in C2B) and 7 multiple mutant forms of C2AB were generated. These mutants were screened for function in the lipid mixing assay. We note that previous studies have suggested the sensitivity of the in vitro lipid mixing assay is relatively low. For instance, mutations within the linker of syt 1 yielded marked effects on secretion in PC12 cells, but had only modest effects when later analyzed in the reconstituted fusion assay (8, 11). The relative low sensitivity of the assay assures that only mutants with strong effects will be identified.
For each mutant the %Fmax at 60 min was normalized to data obtained using wild-type (wt) C2AB (Fig. 5A). In most cases no apparent change in Ca2+-triggered fusion or clamping activity was observed. However, several mutants could be grouped based on their distinct Ca2+-dependent and independent activities. These groups were visualized based on the percentage of wt fusion retained for each mutant following the addition of Ca2+ and plotted versus its change in clamping activity (fusion in EGTA) (Fig. 5B). From this analysis the mutants could be divided into four distinct populations.
The first set of mutations, T328 and E341, resulted in
20% loss of Ca2+-triggered fusion activity but no significant loss in Ca2+-independent clamping activity. These mutants bind t-SNARES and PS in a Ca2+-dependent manner (Figs. 6 and 7), indicating that they are not dramatically misfolded. The extent of t-SNARE binding was actually enhanced in both EGTA and Ca2+ conditions; however, the relative increase in t-SNARE binding in response to Ca2+ was lower. The T328A and E341A mutants had a reduced ability to drive the assembly of SNAP-25 onto membrane-embedded syntaxin (supplemental Fig. S3), suggesting defects in their ability to drive structural transitions in SNARE proteins. We note that Sr2+ triggers the binding of syt 1 to t-SNAREs but is unable to activate fusion (8). The ability of Sr2+ to uncouple C2AB·t-SNARE binding from regulated fusion is somewhat similar to the effect of the T328A and E341A mutations; these mutants also appear to dissociate t-SNARE-binding activity from the ability of syt to drive folding of t-SNAREs and to regulate membrane fusion.
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A third set of mutations (e.g. K326A, K327A, and K331A) displayed diminished clamping activity but did not exhibit dramatic changes in their ability to stimulate fusion in response to Ca2+. Finally, a fourth mutant, K313R/K325R/K327R, appeared to clamp fusion more effectively than wt C2AB, consistent with a slight increase in its t-SNARE binding (Fig. 6). We also note that this mutant exhibited a higher degree of cooperativity for binding to PS/PE/PC vesicles (Fig. 7; note that the cooperativity values reported in Fig. 7B are lower than in previous reports (11, 34) due to inclusion of PE in the vesicles and the use of lower amounts of PS). Together with T328A and E341A, these data demonstrate that the Ca2+-dependent stimulatory function of syt 1 can be uncoupled from its clamping activity in the absence of Ca2+.
| DISCUSSION |
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30–36% of the total phospholipid content of the plasma and SV membranes (39, 40) and is the only major phospholipid missing from previous fusion assays (8, 17–19).
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30% PE, suggesting that syt 1 may be tuned to operate at physiological levels of this lipid. Moreover, inclusion of PE resulted in a surprising and novel finding: under this condition, the isolated C2B domain of syt 1 was capable of facilitating fusion in response to Ca2+. The enrichment of PE in the inner leaflet of the plasma membrane (44) and its cone shape, which is conducive to membrane bending, may lower the free energy required to form a membrane stalk during the initial steps of vesicle fusion (45). The finding that PE enhances C2AB and C2B function, without altering their abilities to engage t-SNAREs (Fig. 3), is consistent with this model; C2B is able to regulate SNARE-mediated fusion in the presence of PE due to a lowered energy barrier.
The autonomous function of C2B reported here would seem to contradict recent studies, in which C2B alone was not able to regulate Ca2+-triggered fusion (19, 28, 29). Three significant differences in assay conditions between the current study and previous reports readily explain the apparent discrepancy. The first study, which characterized the effect of C2AB and C2A plus C2B in the fusion assay, did not include PE in the vesicles (19). Hence, C2B was without effect (Fig. 1). Second, simultaneous addition of equal molar amounts of both isolated domains, C2A plus C2B, results in an apparent lack of function, even in the presence of PE, due to the ability of C2A to block C2B-mediated stimulation (Fig. 4B). Third, the concentration of C2B required to yield fusion is
6-fold greater than for C2AB (Fig. 2B). Therefore, C2B-regulated fusion will not be detected if relatively low concentrations of C2B are tested (i.e. < 10 µM) (28, 29).
The C2A domain has distinctly different effects depending on how it is partnered with C2B. When tethered to C2B, C2A plays a positive role to enhance the activity of C2AB as compared with isolated C2B. However, when the linker connecting the two domains is severed, we found that not only is the synergy between these C2 domains lost but that C2A, in trans, now inhibits the action of C2B. Thus far, competition experiments with C2AB and C2B have not revealed C2A-mediated displacement from the fusion complex, raising the possibility that C2A co-assembles with the fusion machinery to disrupt function. Further biochemical/biophysical experiments will be required to discern the exact mechanism of C2A-mediated inhibition. Regardless of the mechanism of inhibition by C2A, these data provide additional support for the idea that the tandem C2 domains of syt 1 somehow interact with one another, in the context of the intact cytosolic domain of the protein (37), to enhance the function of syt during fusion. These findings are consistent with previously reported cooperative interactions between C2A and C2B, in terms of PS- and t-SNARE-binding activity (6, 11, 19, 30).
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To gain new insight into this question, we analyzed C2AB using scanning alanine mutagenesis to search for residues that might regulate fusion via forming contacts with t-SNAREs. Given the findings detailed above, we focused most of our mutations on the C2B domain. We chose to substitute charged residues on the surface of C2B (e.g. arginine, lysine, aspartate, and glutamate), because prevailing evidence indicates C2AB binds t-SNARE through electrostatic interactions (11, 43). The majority of mutations resulted in protein with no apparent change in activity when screened in the fusion assay; however, four separate groupings emerged (Fig. 5B).
The first group of mutations, T328A and E341A, displayed a loss of Ca2+-triggered fusion activity without a significant loss in Ca2+-independent clamping ability. Analysis of the protein structure of C2B indicates that Thr-328 and Glu-341 are in close proximity and might interact with each other (Fig. 8B). These two residues are highly conserved among C2 domains from the syt family, as well as C2 domains found in a variety of additional proteins (47). Biochemically, these mutants displayed an increase in t-SNARE binding and a diminished ability to assemble SNAP-25 onto syntaxin. Hence, these mutations appear to perturb the ability of C2AB to drive structural changes in t-SNAREs without disrupting binding per se.
The second group of mutations resulted in a concomitant loss of Ca2+-triggered fusion and clamping activity (D392A/M393I, R398A, and R399A (Fig. 8D)). Interestingly, R398A emerged as a mutation that might provide novel insight into the interactions between C2AB and t-SNAREs. This mutant exhibited losses in t-SNARE binding and assembly activity, but retained robust PS-binding activity (Fig. 7), indicating that it was correctly folded. In addition, the R398A mutant also retains the ability to aggregate vesicles (supplemental Fig. S4). The observation that Arg-398 lies on the opposite "end" of C2B from the Ca2+/membrane-binding loops indicates that syt 1 might possess distinct t-SNARE and membrane-binding interfaces (Fig. 8, E and F). This does not necessarily contradict previous models, which suggested that regions adjacent to the membrane penetration loops of C2AB interact with t-SNAREs (12, 34). In the case of the K366A mutation in C2B (34), the region lies roughly within the t-SNARE interaction "plane" described below (Fig. 8A). The finding that some of these mutations affect the activity of the adjacent C2B domain complicates interpretation of the effects of mutants in C2A (34). Finally, it should also be noted that syt 1 C2AB might engage individual, isolated t-SNAREs (which were used in most of the previous studies) in a manner that is distinct from the reconstituted t-SNARE heterodimers studied here.
The third group of mutations (i.e. R281A, K326A, K327A, and K331A) appears to diminish Ca2+-independent clamping ability of without greatly affecting Ca2+-triggered fusion activity. In contrast, the fourth group had no significant change in Ca2+-triggered fusion activity but exhibited enhanced clamping activity (i.e. K313R/K325R/K327R and E350A). Together, these findings indicate that the ability of syt 1 to inhibit SNARE function in EGTA can be separated, via mutations, from the ability of syt 1 to stimulate fusion in the presence of Ca2+. Thus, this analysis has provided a useful panel of mutant syts for cell-based functional analysis. Structurally, these findings argue for distinct modes of binding under resting and stimulating conditions; one to clamp and one to trigger fusion (17).
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From the data reported here, we propose a new mechanism by which syt 1 binds to t-SNAREs via two distinct modes of interaction. Early in the assembly pathway, Ca2+-independent interactions mediated by Arg-281, the polylysine regions, Lys-331, and Arg-398 might clamp SNARE-complex assembly and arrest fusion (17). Following Ca2+ influx, syt 1 penetrates membranes and drives final assembly of the SNARE complex, or changes the orientation of the fully assembled SNARE complex relative to the plane of the lipid bilayer, to trigger the opening and dilation of fusion pores (48). Regardless of the state of the SNARE complex, Ca2+-triggered fusion seems to be regulated through direct interactions, or protein transitions, involving Thr-328, Glu-341, Arg-398, and the polybasic motif of syt 1.
In summary, we have demonstrated that inclusion of PE into SNARE-bearing vesicles results in two dramatic effects. First, PE enhances the initial rate of C2AB-regulated Ca2+-triggered fusion by 9-fold. Second, PE unmasked the previously unobserved autonomous functions of the isolated C2B domain of syt 1. In the presence of PE, the isolated C2B domain, but not C2A domain, retains much of the regulatory activity of the intact cytosolic domain of the protein, including its ability to clamp SNARE-mediated fusion prior to the Ca2+ signal.
In addition, scanning alanine mutagenesis analysis of syt 1 C2AB revealed several point mutations within the C2B domain that dissociate the Ca2+-independent clamping and Ca2+-dependent stimulatory activities of the protein. Interestingly, the mutations that decreased syt 1 regulated fusion activity lie on one face of the C2B domain, suggesting syt 1 interacts with SNAREs via an extended binding surface. Hence, the data described here indicate it will be crucial to direct attention to previously unappreciated surfaces on the C2B domain of syt 1. Next, it will be important to determine whether the mutations reported here can tune the efficacy of Ca2+-triggered exocytosis and/or alter the frequency of spontaneous SV fusion events (17).
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The on-line version of this article (available at http://www.jbc.org) contains supplemental Figs. S1–S5. ![]()
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1 To whom correspondence should be addressed: 1300 University Ave., 129 SMI, Madison, WI 53706. Tel.: 608-263-5512; Fax: 608-265-5512; E-mail: chapman{at}physiology.wisc.edu.
2 The abbreviations used are: SV, synaptic vesicle; SNARE, soluble N-ethylmaleimide-sensitive factor attachment protein receptor; syt 1, full-length synaptotagmin 1; C2AB, cytosolic domain of syt 1; C2A, membrane proximal C2 domain of syt 1; C2B, membrane distal C2 domain of syt 1; NBD-PE, 1,2-dipalmitoyl-sn-glycero-3-phosphoethanolamine-N-(7-nitro-2–1,3-benzoxadiazol-4-yl); Rhodamine-PE, 1,2-dipalmitoyl-sn-glycero-3-phosphoethanolamine-N-(lissamine rhodamine B sulfonyl); PS, 1,2-dioleoyl-sn-glycero-3-[phospho-L-serine]; PC, 1-palmitoyl-2-oleoyl-sn-glycero-3-phosphocholine; PE, 1-palmitoyl-2-oleoyl-sn-glycero-3-phosphoethanolamine; wt, wild type; syb, synaptobrevin. ![]()
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