JBC Anatrace, Inc.

HOME HELP FEEDBACK SUBSCRIPTIONS ARCHIVE SEARCH
 QUICK SEARCH:   [advanced]


     


A more recent version of this article appeared on November 22, 2000
This Article
Right arrow Full Text (Accepted Manuscript)
Right arrow All Versions of this Article:
275/48/38067    most recent
M002010200v1
Right arrow Alert me when this article is cited
Right arrow Alert me if a correction is posted
Services
Right arrow Email this article to a friend
Right arrow Similar articles in this journal
Right arrow Similar articles in PubMed
Right arrow Alert me to new issues of the journal
Right arrow Download to citation manager
Right arrow reprints & permissions
Citing Articles
Right arrow Citing Articles via HighWire
Right arrow Citing Articles via Google Scholar
Google Scholar
Right arrow Articles by Takahara, T.
Right arrow Articles by Akanuma, H.
Right arrow Search for Related Content
PubMed
Right arrow PubMed Citation
Right arrow Articles by Takahara, T.
Right arrow Articles by Akanuma, H.
Social Bookmarking
 Add to CiteULike   Add to Complore   Add to Connotea   Add to Del.icio.us   Add to Digg   Add to Reddit   Add to Technorati  
What's this?

Papers In Press, published online ahead of print September 5, 2000
J. Biol. Chem, 10.1074/jbc.M002010200
Submitted on March 9, 2000
Accepted on September 5, 2000

Heterogeneous Sp1 mRNAs in human HepG2 cells include a product of homotypic trans-splicing

Terunao Takahara, Shin-ichi Kanazu, Shuichi Yanagisawa, and Hiroshi Akanuma

Department of Life Sciences (Chemistry), The University of Tokyo, Tokyo 153-8902

Corresponding Author: csyanag{at}mail.ecc.u-tokyo.ac.jp

Sp1 is one of the well-documented transcription factors, but the whole structure of human Sp1 has not been determined yet. In the present study, we isolated several cDNAs representing two forms of human Sp1 mRNA with different 5? terminal structures in HepG2 cells. Isolation of a genomic clone established that one of the cDNAs represents the mRNA having consecutive alignment of exons, which allowed to deduce the complete amino acid sequence for human Sp1. Another cDNA clone had a surprising structure, which possessed an alignment of exons 3-2-3. Both RT-PCR and RNase protection assays confirmed accumulation of two forms of Sp1 mRNA in HepG2 cells. Since Southern blot analysis suggested that exon 3 is of a single copy in the genome, the cDNA clone having the duplicated sequences for exon 3 appeared to reflect an unusual RNA editing mechanism, i.e., trans-splicing between identical pre-mRNAs of human Sp1.


Add to CiteULike CiteULike   Add to Complore Complore   Add to Connotea Connotea   Add to Del.icio.us Del.icio.us   Add to Digg Digg   Add to Reddit Reddit   Add to Technorati Technorati    What's this?


This article has been cited by other articles:


Home page
ScienceHome page
H. Li, J. Wang, G. Mor, and J. Sklar
A Neoplastic Gene Fusion Mimics Trans-Splicing of RNAs in Normal Human Cells
Science, September 5, 2008; 321(5894): 1357 - 1361.
[Abstract] [Full Text] [PDF]


Home page
RNAHome page
K. D. Viles and B. A. Sullenger
Proximity-dependent and proximity-independent trans-splicing in mammalian cells
RNA, June 1, 2008; 14(6): 1081 - 1094.
[Abstract] [Full Text] [PDF]


Home page
Genome ResHome page
M. B. Gerstein, C. Bruce, J. S. Rozowsky, D. Zheng, J. Du, J. O. Korbel, O. Emanuelsson, Z. D. Zhang, S. Weissman, and M. Snyder
What is a gene, post-ENCODE? History and updated definition
Genome Res., June 1, 2007; 17(6): 669 - 681.
[Abstract] [Full Text] [PDF]


Home page
BioinformaticsHome page
R. J. Dixon, I. C. Eperon, and N. J. Samani
Complementary intron sequence motifs associated with human exon repetition: a role for intragenic, inter-transcript interactions in gene expression
Bioinformatics, January 15, 2007; 23(2): 150 - 155.
[Abstract] [Full Text] [PDF]


Home page
BioinformaticsHome page
X. Shao, V. Shepelev, and A. Fedorov
Bioinformatic analysis of exon repetition, exon scrambling and trans-splicing in humans
Bioinformatics, March 15, 2006; 22(6): 692 - 698.
[Abstract] [Full Text] [PDF]


Home page
Nucleic Acids ResHome page
R. J. Dixon, I. C. Eperon, L. Hall, and N. J. Samani
A genome-wide survey demonstrates widespread non-linear mRNA in expressed sequences from multiple species
Nucleic Acids Res., October 19, 2005; 33(18): 5904 - 5913.
[Abstract] [Full Text] [PDF]


Home page
Nucleic Acids ResHome page
R. Rigatti, J.-H. Jia, N. J. Samani, and I. C. Eperon
Exon repetition: a major pathway for processing mRNA of some genes is allele-specific
Nucleic Acids Res., January 22, 2004; 32(2): 441 - 446.
[Abstract] [Full Text] [PDF]


Home page
Genes Dev.Home page
T. Horiuchi, E. Giniger, and T. Aigaki
Alternative trans-splicing of constant and variable exons of a Drosophila axon guidance gene, lola
Genes & Dev., October 15, 2003; 17(20): 2496 - 2501.
[Abstract] [Full Text] [PDF]


Home page
Genes Dev.Home page
X. Wang, H. Su, and A. Bradley
Molecular mechanisms governing Pcdh-gamma gene expression: Evidence for a multiple promoter and cis-alternative splicing model
Genes & Dev., August 1, 2002; 16(15): 1890 - 1905.
[Abstract] [Full Text] [PDF]


Home page
J. Biol. Chem.Home page
C. Finta and P. G. Zaphiropoulos
Intergenic mRNA Molecules Resulting from trans-Splicing
J. Biol. Chem., February 15, 2002; 277(8): 5882 - 5890.
[Abstract] [Full Text] [PDF]


Home page
Mol Biol EvolHome page
S. C. Warner, C. Finta, and P. G. Zaphiropoulos
Intergenic Transcripts Containing a Novel Human Cytochrome P450 2C Exon 1 Spliced to Sequences from the CYP2C9 Gene
Mol. Biol. Evol., October 1, 2001; 18(10): 1841 - 1848.
[Abstract] [Full Text] [PDF]


Home page
J. Biol. Chem.Home page
M. Nicolas, V. Noe, K. B. Jensen, and C. J. Ciudad
Cloning and Characterization of the 5'-Flanking Region of the Human Transcription Factor Sp1 Gene
J. Biol. Chem., June 15, 2001; 276(25): 22126 - 22132.
[Abstract] [Full Text] [PDF]




HOME HELP FEEDBACK SUBSCRIPTIONS ARCHIVE SEARCH
 All ASBMB Journals   Molecular and Cellular Proteomics 
 Journal of Lipid Research   ASBMB Today 
Copyright © 2000 by the American Society for Biochemistry and Molecular Biology.