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M100998200v1
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Papers In Press, published online ahead of print March 20, 2001
J. Biol. Chem, 10.1074/jbc.M100998200
Submitted on February 2, 2001
Revised on March 14, 2001
Accepted on March 19, 2001

The pyrimidine ring-opened derivative of 1,N6-ethenoadenine is excised from DNA by the Escherichia coli Fpg and Nth glycosylases

Elzbieta Speina, Jaroslaw M. Ciesla, Jacek Wojcik, Monika Bajek, Jaroslaw T. Kusmierek, and Barbara Tudek

Institute of Biochemistry and Biophysics, Polish Academy of Sciences, Warsaw 02-106

Corresponding Author: tudek{at}ibb.waw.pl

It was previously shown that 1,N6-ethenoadenine (epsilon A) in DNA rearranges into a pyrimidine ring-opened derivative of 20-fold higher mutagenic potency in Escherichia coli (AB1157 lacdelta U169) than the parental epsilon A (Basu et al., (1993) Biochemistry, 32, 12793-12801). We have found that at pH 7.0, stability of the N-glycosidic bond in epsilon dA is 20-fold lower than in dA. In alkaline conditions, but also at neutrality epsilon dA depurinates or converts into products: epsilon dA->B->C->D. Compound B is a product of water molecule addition to the C(2)-N(3) bond, which is in equilibrium with a product of N(1)-C(2) bond rupture in epsilon dA. Compound C is a deformylated derivative of ring-opened compound B, which further depurinates yielding compound D. Ethenoadenine degradation products are not recognized by human N-alkylpurine-DNA glycosylase, which repairs epsilon A. Product B is excised from oligodeoxynucleotides by E. coli formamidopyrimidine-DNA glycosylase (Fpg) and endonuclease III (Nth). Repair by the Fpg protein is as efficient as that of 7,8-dihydro-8-oxoguanine, when the excised base is paired with dT and dC, but less favorable when paired with dG and dA. Ethenoadenine rearrangement products are formed in oligodeoxynucleotides also at neutral pH with the rate of about 2-3% per week at 37°C, so they may contribute to epsilon A mutations.


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