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M202127200v1
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Papers In Press, published online ahead of print June 26, 2002
J. Biol. Chem, 10.1074/jbc.M202127200
Submitted on March 4, 2002
Revised on May 31, 2002
Accepted on June 25, 2002

Long CTG•CAG repeats from myotonic dystrophy are preferred sites for intermolecular recombination

Anna Pluciennik, Ravi R. Iyer, Marek Napierala, Jacquelynn E. Larson, Marcin Filutowicz, and Robert D. Wells

Center for Genome Research, Institute of Biosciences & Technology, Houston, TX 77030

Corresponding Author: rwells{at}ibt.tamu.edu

Homologous recombination was shown to enable the expansion of CTG•CAG repeat sequences. Other prior investigations revealed the involvement of replication and DNA repair in these genetic instabilities. Herein, we used a genetic assay to measure the frequency of homologous intermolecular recombination between two CTG•CAG tracts. When compared with non-repeating sequences of similar lengths, long (CTG•CAG)n repeats recombine with a ~60 fold higher frequency. Sequence polymorphisms which interrupt the homogeneity of the CTG•CAG repeat tracts reduce the recombination frequency as compared to the pure uninterrupted repeats. The orientation of the repeats relative to the origin of replication strongly influenced the recombination frequency. This suggests the involvement of DNA replication in the recombination process of triplet repeats. We propose that DNA polymerases stall within the CTG•CAG repeat tracts causing nicks or double strand breaks which stimulate homologous recombination. The recombination process is RecA dependent.


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