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A more recent version of this article appeared on February 7, 2003
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M208954200v1
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Papers In Press, published online ahead of print December 9, 2002
J. Biol. Chem, 10.1074/jbc.M208954200
Submitted on September 3, 2002
Revised on December 4, 2002
Accepted on December 9, 2002

The TAR-RNA binding protein, TRBP, stimulates the expression of TAR-containing RNAs in vitro and in vivo independently of its ability to inhibit the dsRNA dependent kinase PKR

Dominique Dorin, Marion C. Bonnet, Sylvie Bannwarth, Anne Gatignol, Eliane F. Meurs, and Catherine M. Vaquero

INSERM U511, Paris 75013

Corresponding Author: vaquero{at}idf.ext.jussieu.fr

TRBP (TAR RNA Binding Protein) and PKR, the interferon-induced dsRNA-regulated protein kinase, contain two dsRNA binding domains in their N-terminus. They both bind to the transactivation response element (TAR) of HIV-1 RNAs through different sites. Binding to dsRNA activates PKR leading to eIF-2a phosphorylation and protein synthesis inhibition. TRBP and PKR can heterodimerize, which inhibits the kinase function of PKR and has a positive effect on HIV-1 expression. In this study, an in vitro reticulocyte assay revealed the poor expression of TAR containing CAT RNAs compared to CAT RNAs. Addition of TRBP restored translation efficiency of TAR-CAT RNA and decreased the phosphorylation status of eIF-2a. Unexpectedly, eIF-2a was phosphorylated in the presence of TAR CAT as well as CAT RNA. TRBP inhibited eIF-2a phosphorylation in both cases, suggesting that it restores the translation of TAR-CAT RNA independently to its ability to inhibit PKR. TRBP activity was then analyzed in a PKR-free environment using PKR-deficient murine embryo fibroblasts. In a transient reporter gene assay, TRBP stimulated the expression of a TAR containing luciferase 3.8 fold whereas mutated TAR structures or devoid of TAR were stimulated 1.5 to 2.4 fold. Overall, the activity of TRBP2 was higher when the 5' end of the mRNA was structured. Increasing concentrations of TRBP showed no significant modification of the luciferase RNA levels, suggesting that TRBP stimulates translation of TAR-containing RNAs. Therefore, TRBP acts as an important cellular factor for efficient translation of dsRNA containing transcripts, both by inhibiting PKR and in a PKR-independent pathway.


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