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Papers In Press, published online ahead of print May 31, 2005
UMR 8601 CNRS, Université René Descartes, Paris Cedex 06 75270
Corresponding Author: jean-pierre.girault{at}univ-paris5.fr
J. Biol. Chem, 10.1074/jbc.M501628200
Submitted on February 11, 2005
Revised on May 31, 2005
Accepted on May 31, 2005
STD and TRNOESY NMR studies on the conformation of the oncogenic protein
-catenin containing the phosphorylated motif DpSGXXpS bound to the
-TrCP protein
-TrCP is the F-box protein component of an Skp1/Cul1/F-box (SCF)-type ubiquitin ligase complex. Biochemical studies have suggested that
-TrCP targets the oncogenic protein
-Catenin for ubiquitination and followed by proteasome degradation. To further elucidate the basis of this interaction, a complex between a 32-residue peptide from
-Catenin containing the phosphorylated motif DPSGXXPS (P-
-Cat17-48) and
-TrCP was studied using Saturation Transfer Difference (STD) Nuclear Magnetic Resonance (NMR) experiments. These experiments make it possible to identify the binding epitope of a ligand at atomic resolution. An analysis of STD spectra provided clear evidence that only a few of the 32 residues receive the largest saturation transfer. In particular, the amide protons of the residues in the phosphorylated motif appear to be in close contact to the amino acids of the
-TrCP binding pocket. The amide and aromatic protons of the His24 and Trp25 residues also receive a significant saturation transfer. These findings are in keeping with a recently published X-ray structure of a shorter
-Catenin fragment with the
-TrCP1-Skp1 complex, and with the earlier findings from mutagenesis and activity assays. To better characterize the ligand-protein interaction, the bound conformation of the phosphorylated
-Catenin peptide was obtained using TRansfer Nuclear Overhauser Effect SpectroscopY (TRNOESY) experiments. Finally, we obtained the bound structure of the phosphorylated peptide showing the protons identified by STD NMR as exposed in close proximity to the molecule surface.
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