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Keyword
- ChIP-Seq1
- chromatin immunoprecipitation assays combined with DNA sequencing1
- chromatin structure1
- Co-IP1
- coimmunoprecipitation1
- DDR1
- DNA damage response1
- DNA mismatch repair1
- DNA replication1
- DNA transcription1
- DNA-protein interaction1
- FACS1
- fluorescence-activated cell sorting1
- H3K36me31
- KI1
- knock-in1
- mismatch repair1
- MMR1
- MSH61
- oxidative DNA damage1
- RIPA1
- ROS1
- SETD21
- TSS1
DNA and Chromosomes
2 Results
- Research ArticleOpen Access
Interplay between H3K36me3, methyltransferase SETD2, and mismatch recognition protein MutSα facilitates processing of oxidative DNA damage in human cells
Journal of Biological ChemistryVol. 298Issue 7102102Published online: June 3, 2022- Sida Guo
- Jun Fang
- Weizhi Xu
- Janice Ortega
- Chang-Yi Liu
- Liya Gu
- and others
Cited in Scopus: 0Oxidative DNA damage contributes to aging and the pathogenesis of numerous human diseases including cancer. 8-hydroxyguanine (8-oxoG) is the major product of oxidative DNA lesions. Although OGG1-mediated base excision repair is the primary mechanism for 8-oxoG removal, DNA mismatch repair has also been implicated in processing oxidative DNA damage. However, the mechanism of the latter is not fully understood. Here, we treated human cells defective in various 8-oxoG repair factors with H2O2 and performed biochemical, live cell imaging, and chromatin immunoprecipitation sequencing analyses to determine their response to the treatment. - DNA and ChromosomesOpen Access
H3K36me3-mediated mismatch repair preferentially protects actively transcribed genes from mutation
Journal of Biological ChemistryVol. 293Issue 20p7811–7823Published online: April 2, 2018- Yaping Huang
- Liya Gu
- Guo-Min Li
Cited in Scopus: 44Histone H3 trimethylation at lysine 36 (H3K36me3) is an important histone mark involved in both transcription elongation and DNA mismatch repair (MMR). It is known that H3K36me3 recruits the mismatch-recognition protein MutSα to replicating chromatin via its physical interaction with MutSα's PWWP domain, but the exact role of H3K36me3 in transcription is undefined. Using ChIP combined with whole-genome DNA sequencing analysis, we demonstrate here that H3K36me3, together with MutSα, is involved in protecting against mutation, preferentially in actively transcribed genomic regions.