Introduction
A number of host proteins possessing antiviral activity have evolved as the first line of defense to suppress the replication of viruses in a cell-autonomous manner. These host proteins, which are often referred to as restriction factors, include APOBEC and SERINC family members, TRIM5α, SAMHD1, and tetherin. Many of these antiviral factors are either expressed constitutively or are induced by type-I interferon (IFN)
3The abbreviations used are:
IFN
interferon
TM
transmembrane
CT
cytoplasmic tail
CC
coiled-coil
GPI
glycosylphosphatidylinositol
SIV
simian immunodeficiency virus
Y2H
yeast two-hybrid
SGTA
small glutamine-rich tetratricopeptide repeat–containing protein α
V-ATPase
vacuolar H+-ATPase
TR
transferrin receptor
hCMV
human cytomegalovirus
EV71
enterovirus 71
HA
hemagglutinin
DMEM
Dulbecco's modified Eagle's medium
FBS
fetal bovine serum
VRE
virus release efficiency.
(in the case of the so-called IFN-stimulated genes, or ISGs) as a component of the innate immune system (
1- Colomer-Lluch M.
- Ruiz A.
- Moris A.
- Prado J.G.
Restriction factors: from intrinsic viral restriction to shaping cellular immunity against HIV-1.
,
2- Forlani G.
- Shallak M.
- Ramia E.
- Tedeschi A.
- Accolla R.S.
Restriction factors in human retrovirus infections and the unprecedented case of CIITA as link of intrinsic and adaptive immunity against HTLV-1.
,
3HIV suppression by host restriction factors and viral immune evasion.
,
4- D Urbano V.
- De Crignis E.
- Re M.C.
Host restriction factors and human immunodeficiency virus (HIV-1): a dynamic interplay involving all phases of the viral life cycle.
). Tetherin (also known as bone marrow stromal antigen-2 (BST-2), cluster of differentiation 317 (CD317), or HM1.24) is an IFN-inducible, type II transmembrane (TM) glycoprotein that interferes with the late stage of the virus replication cycle by tethering virions to the cell surface (
5- Neil S.J.
- Zang T.
- Bieniasz P.D.
Tetherin inhibits retrovirus release and is antagonized by HIV-1 Vpu.
,
6- Van Damme N.
- Goff D.
- Katsura C.
- Jorgenson R.L.
- Mitchell R.
- Johnson M.C.
- Stephens E.B.
- Guatelli J.
The interferon-induced protein BST-2 restricts HIV-1 release and is downregulated from the cell surface by the viral Vpu protein.
). Tetherin was originally identified as a marker for bone marrow stromal cells; it is expressed constitutively in terminally differentiated B cells and T cells, monocytes, and dendritic cells and is up-regulated in some cancer cells (
7- Cai D.
- Cao J.
- Li Z.
- Zheng X.
- Yao Y.
- Li W.
- Yuan Z.
Up-regulation of bone marrow stromal protein 2 (BST2) in breast cancer with bone metastasis.
,
8- Erikson E.
- Adam T.
- Schmidt S.
- Lehmann-Koch J.
- Over B.
- Goffinet C.
- Harter C.
- Bekeredjian-Ding I.
- Sertel S.
- Lasitschka F.
- Keppler O.T.
In vivo expression profile of the antiviral restriction factor and tumor-targeting antigen CD317/BST-2/HM1.24/tetherin in humans.
,
9- Goto T.
- Kennel S.J.
- Abe M.
- Takishita M.
- Kosaka M.
- Solomon A.
- Saito S.
A novel membrane antigen selectively expressed on terminally differentiated human B cells.
,
10- Grützmann R.
- Boriss H.
- Ammerpohl O.
- Lüttges J.
- Kalthoff H.
- Schackert H.K.
- Klöppel G.
- Saeger H.D.
- Pilarsky C.
Meta-analysis of microarray data on pancreatic cancer defines a set of commonly dysregulated genes.
,
11- Ishikawa J.
- Kaisho T.
- Tomizawa H.
- Lee B.O.
- Kobune Y.
- Inazawa J.
- Oritani K.
- Itoh M.
- Ochi T.
- Ishihara K.
Molecular cloning and chromosomal mapping of a bone marrow stromal cell surface gene, BST2, that may be involved in pre-B-cell growth.
,
12- Walter-Yohrling J.
- Cao X.
- Callahan M.
- Weber W.
- Morgenbesser S.
- Madden S.L.
- Wang C.
- Teicher B.A.
Identification of genes expressed in malignant cells that promote invasion.
). Tetherin comprises 180 amino acids and is localized in lipid rafts at the cell surface and on intracellular membranes (
11- Ishikawa J.
- Kaisho T.
- Tomizawa H.
- Lee B.O.
- Kobune Y.
- Inazawa J.
- Oritani K.
- Itoh M.
- Ochi T.
- Ishihara K.
Molecular cloning and chromosomal mapping of a bone marrow stromal cell surface gene, BST2, that may be involved in pre-B-cell growth.
,
13- Kupzig S.
- Korolchuk V.
- Rollason R.
- Sugden A.
- Wilde A.
- Banting G.
Bst-2/HM1.24 is a raft-associated apical membrane protein with an unusual topology.
). Tetherin has an unusual topology: it contains an N-terminal cytoplasmic tail (CT), an α-helical TM domain followed by an extracellular coiled-coil (CC) domain, and a putative C-terminal glycosylphosphatidylinositol (GPI) anchor. Because tetherin has two membrane anchors (TM and GPI-anchor), it is associated with the plasma membrane, specifically in cholesterol- and sphingolipid-rich membrane microdomains (
13- Kupzig S.
- Korolchuk V.
- Rollason R.
- Sugden A.
- Wilde A.
- Banting G.
Bst-2/HM1.24 is a raft-associated apical membrane protein with an unusual topology.
). The CC ectodomain of human tetherin contains three Cys residues that are essential for the formation of homodimers via disulfide bonding and two Asn residues that are modified with
N-linked oligosaccharides (
13- Kupzig S.
- Korolchuk V.
- Rollason R.
- Sugden A.
- Wilde A.
- Banting G.
Bst-2/HM1.24 is a raft-associated apical membrane protein with an unusual topology.
,
14- Ohtomo T.
- Sugamata Y.
- Ozaki Y.
- Ono K.
- Yoshimura Y.
- Kawai S.
- Koishihara Y.
- Ozaki S.
- Kosaka M.
- Hirano T.
- Tsuchiya M.
Molecular cloning and characterization of a surface antigen preferentially overexpressed on multiple myeloma cells.
,
15- Perez-Caballero D.
- Zang T.
- Ebrahimi A.
- McNatt M.W.
- Gregory D.A.
- Johnson M.C.
- Bieniasz P.D.
Tetherin inhibits HIV-1 release by directly tethering virions to cells.
). Both membrane anchors, and CT and CC domains, and the three Cys residues in the CC domain are essential for the antiviral activity of tetherin (
5- Neil S.J.
- Zang T.
- Bieniasz P.D.
Tetherin inhibits retrovirus release and is antagonized by HIV-1 Vpu.
,
15- Perez-Caballero D.
- Zang T.
- Ebrahimi A.
- McNatt M.W.
- Gregory D.A.
- Johnson M.C.
- Bieniasz P.D.
Tetherin inhibits HIV-1 release by directly tethering virions to cells.
,
16- Andrew A.J.
- Miyagi E.
- Kao S.
- Strebel K.
The formation of cysteine-linked dimers of BST-2/tetherin is important for inhibition of HIV-1 virus release but not for sensitivity to Vpu.
). We reported previously that high-mannose modification of a single asparagine residue is necessary and sufficient, whereas complex-type glycosylation is dispensable, for cell-surface expression and antiviral activity of tetherin (
17- Waheed A.A.
- Gitzen A.
- Swiderski M.
- Freed E.O.
High-mannose but not complex-type glycosylation of tetherin is required for restriction of HIV-1 release.
). Tetherin inhibits the release of a variety of enveloped viruses, including not only HIV-1 but also other lentiviruses, other retroviruses, and alphaviruses, filoviruses, arenaviruses, paramyxoviruses, rhabdoviruses, flaviviruses, orthomyxoviruses, orthohepadnaviruses, and herpesviruses (reviewed in Refs.
18- Mahauad-Fernandez W.D.
- Okeoma C.M.
The role of BST-2/tetherin in host protection and disease manifestation.
,
19The antiviral activities of tetherin.
,
20Counteraction of the multifunctional restriction factor tetherin.
).
Several lentiviral proteins have acquired the ability to counteract the antiviral activity of tetherin. The envelope (Env) glycoprotein of HIV-2 and some strains of simian immunodeficiency virus (SIV) counteracts tetherin by sequestering it in a perinuclear compartment, thereby down-regulating its expression from the cell surface (
21- Gupta R.K.
- Mlcochova P.
- Pelchen-Matthews A.
- Petit S.J.
- Mattiuzzo G.
- Pillay D.
- Takeuchi Y.
- Marsh M.
- Towers G.J.
Simian immunodeficiency virus envelope glycoprotein counteracts tetherin/BST-2/CD317 by intracellular sequestration.
,
22- Hauser H.
- Lopez L.A.
- Yang S.J.
- Oldenburg J.E.
- Exline C.M.
- Guatelli J.C.
- Cannon P.M.
HIV-1 Vpu and HIV-2 Env counteract BST-2/tetherin by sequestration in a perinuclear compartment.
,
23Antagonism to and intracellular sequestration of human tetherin by the human immunodeficiency virus type 2 envelope glycoprotein.
). The Nef proteins from SIVcpz and SIVgor antagonize the respective nonhuman primate tetherin orthologs by decreasing their cell-surface expression without inducing their degradation, possibly by intracellular sequestration (
24- Götz N.
- Sauter D.
- Usmani S.M.
- Fritz J.V.
- Goffinet C.
- Heigele A.
- Geyer M.
- Bibollet-Ruche F.
- Learn G.H.
- Fackler O.T.
- Hahn B.H.
- Kirchhoff F.
Reacquisition of Nef-mediated tetherin antagonism in a single in vivo passage of HIV-1 through its original chimpanzee host.
,
25- Jia B.
- Serra-Moreno R.
- Neidermyer W.
- Rahmberg A.
- Mackey J.
- Fofana I.B.
- Johnson W.E.
- Westmoreland S.
- Evans D.T.
Species-specific activity of SIV Nef and HIV-1 Vpu in overcoming restriction by tetherin/BST2.
,
26- Zhang F.
- Wilson S.J.
- Landford W.C.
- Virgen B.
- Gregory D.
- Johnson M.C.
- Munch J.
- Kirchhoff F.
- Bieniasz P.D.
- Hatziioannou T.
Nef proteins from simian immunodeficiency viruses are tetherin antagonists.
). The glycoprotein M of herpes simplex virus 1, the Env glycoproteins of equine infectious anemia virus, feline immunodeficiency virus, and HERV-K human endogenous retrovirus, K5 of Kaposi's sarcoma-associated herpesvirus, and the nonstructural protein 1 of chikungunya virus antagonize tetherin by distinct mechanisms (
27- Blondeau C.
- Pelchen-Matthews A.
- Mlcochova P.
- Marsh M.
- Milne R.S.
- Towers G.J.
Tetherin restricts herpes simplex virus 1 and is antagonized by glycoprotein M.
,
28- Jones P.H.
- Maric M.
- Madison M.N.
- Maury W.
- Roller R.J.
- Okeoma C.M.
BST-2/tetherin-mediated restriction of chikungunya (CHIKV) VLP budding is counteracted by CHIKV non-structural protein 1 (nsP1).
,
29- Lemaître C.
- Harper F.
- Pierron G.
- Heidmann T.
- Dewannieux M.
The HERV-K human endogenous retrovirus envelope protein antagonizes Tetherin antiviral activity.
,
30- Morrison J.H.
- Guevara R.B.
- Marcano A.C.
- Saenz D.T.
- Fadel H.J.
- Rogstad D.K.
- Poeschla E.M.
Feline immunodeficiency virus envelope glycoproteins antagonize tetherin through a distinctive mechanism that requires virion incorporation.
,
31- Yin X.
- Hu Z.
- Gu Q.
- Wu X.
- Zheng Y.H.
- Wei P.
- Wang X.
Equine tetherin blocks retrovirus release and its activity is antagonized by equine infectious anemia virus envelope protein.
). HIV-1 Vpu antagonizes human, chimpanzee, and gorilla tetherin but is relatively inactive against tetherin orthologs from other nonhuman primates and nonprimate species (
25- Jia B.
- Serra-Moreno R.
- Neidermyer W.
- Rahmberg A.
- Mackey J.
- Fofana I.B.
- Johnson W.E.
- Westmoreland S.
- Evans D.T.
Species-specific activity of SIV Nef and HIV-1 Vpu in overcoming restriction by tetherin/BST2.
,
32- McNatt M.W.
- Zang T.
- Hatziioannou T.
- Bartlett M.
- Fofana I.B.
- Johnson W.E.
- Neil S.J.
- Bieniasz P.D.
Species-specific activity of HIV-1 Vpu and positive selection of tetherin transmembrane domain variants.
,
33- Sauter D.
- Schindler M.
- Specht A.
- Landford W.N.
- Münch J.
- Kim K.A.
- Votteler J.
- Schubert U.
- Bibollet-Ruche F.
- Keele B.F.
- Takehisa J.
- Ogando Y.
- Ochsenbauer C.
- Kappes J.C.
- Ayouba A.
- et al.
Tetherin-driven adaptation of Vpu and Nef function and the evolution of pandemic and nonpandemic HIV-1 strains.
). Non-mutually exclusive mechanisms by which Vpu antagonizes tetherin include (i) removing it from virus budding sites, (ii) promoting its degradation, and/or (iii) down-regulating its cell-surface expression.
The accessory protein Vpu is a 16-kDa, 81-amino acid type I integral membrane phosphoprotein containing a short luminal N-terminal domain, a 23-amino acid TM domain, and a long CT (
34- Maldarelli F.
- Chen M.Y.
- Willey R.L.
- Strebel K.
Human immunodeficiency virus type 1 Vpu protein is an oligomeric type I integral membrane protein.
,
35- Strebel K.
- Klimkait T.
- Martin M.A.
A novel gene of HIV-1, vpu, and its 16-kilodalton product.
). The CT of Vpu consists of two α-helices linked by a short loop that contains two serine residues (Ser-52 and Ser-56) that undergo phosphorylation. Vpu is primarily localized in the endoplasmic reticulum, the
trans-Golgi network, the endosomal membranes, and, to some extent, the plasma membrane (
36- Pacyniak E.
- Gomez M.L.
- Gomez L.M.
- Mulcahy E.R.
- Jackson M.
- Hout D.R.
- Wisdom B.J.
- Stephens E.B.
Identification of a region within the cytoplasmic domain of the subtype B Vpu protein of human immunodeficiency virus type 1 (HIV-1) that is responsible for retention in the golgi complex and its absence in the Vpu protein from a subtype C HIV-1.
,
37- Varthakavi V.
- Smith R.M.
- Martin K.L.
- Derdowski A.
- Lapierre L.A.
- Goldenring J.R.
- Spearman P.
The pericentriolar recycling endosome plays a key role in Vpu-mediated enhancement of HIV-1 particle release.
). Two main functions have been attributed to Vpu: (i) proteasomal degradation of newly synthesized CD4 receptor (
38- Chen M.Y.
- Maldarelli F.
- Karczewski M.K.
- Willey R.L.
- Strebel K.
Human immunodeficiency virus type 1 Vpu protein induces degradation of CD4 in vitro: the cytoplasmic domain of CD4 contributes to Vpu sensitivity.
,
39- Schubert U.
- Antón L.C.
- Bacík I.
- Cox J.H.
- Bour S.
- Bennink J.R.
- Orlowski M.
- Strebel K.
- Yewdell J.W.
CD4 glycoprotein degradation induced by human immunodeficiency virus type 1 Vpu protein requires the function of proteasomes and the ubiquitin-conjugating pathway.
,
40- Willey R.L.
- Maldarelli F.
- Martin M.A.
- Strebel K.
Human immunodeficiency virus type 1 Vpu protein induces rapid degradation of CD4.
) and (ii) down-regulation of tetherin from virus assembly sites to promote the release of viral particles (
5- Neil S.J.
- Zang T.
- Bieniasz P.D.
Tetherin inhibits retrovirus release and is antagonized by HIV-1 Vpu.
,
6- Van Damme N.
- Goff D.
- Katsura C.
- Jorgenson R.L.
- Mitchell R.
- Johnson M.C.
- Stephens E.B.
- Guatelli J.
The interferon-induced protein BST-2 restricts HIV-1 release and is downregulated from the cell surface by the viral Vpu protein.
). The interaction of Vpu and CD4 via their CTs leads to the recruitment of β-transducin repeat–containing protein, followed by CD4 ubiquitylation and proteasomal degradation (
41- Margottin F.
- Bour S.P.
- Durand H.
- Selig L.
- Benichou S.
- Richard V.
- Thomas D.
- Strebel K.
- Benarous R.
A novel human WD protein, h-β TrCp, that interacts with HIV-1 Vpu connects CD4 to the ER degradation pathway through an F-box motif.
), whereas interaction between Vpu and tetherin is mediated by their TM domains (
32- McNatt M.W.
- Zang T.
- Hatziioannou T.
- Bartlett M.
- Fofana I.B.
- Johnson W.E.
- Neil S.J.
- Bieniasz P.D.
Species-specific activity of HIV-1 Vpu and positive selection of tetherin transmembrane domain variants.
). Other functions of Vpu include down-regulation of a number of host cell proteins, including major histocompatibility complex class II, tetraspanin family proteins, and P-selectin glycoprotein ligand-1, from the cell surface (
42- Haller C.
- Müller B.
- Fritz J.V.
- Lamas-Murua M.
- Stolp B.
- Pujol F.M.
- Keppler O.T.
- Fackler O.T.
HIV-1 Nef and Vpu are functionally redundant broad-spectrum modulators of cell surface receptors, including tetraspanins.
,
43- Hussain A.
- Wesley C.
- Khalid M.
- Chaudhry A.
- Jameel S.
Human immunodeficiency virus type 1 Vpu protein interacts with CD74 and modulates major histocompatibility complex class II presentation.
,
44- Lambelé M.
- Koppensteiner H.
- Symeonides M.
- Roy N.H.
- Chan J.
- Schindler M.
- Thali M.
Vpu is the main determinant for tetraspanin downregulation in HIV-1-infected cells.
,
45- Liu Y.
- Fu Y.
- Wang Q.
- Li M.
- Zhou Z.
- Dabbagh D.
- Fu C.
- Zhang H.
- Li S.
- Zhang T.
- Gong J.
- Kong X.
- Zhai W.
- Su J.
- Sun J.
- et al.
Proteomic profiling of HIV-1 infection of human CD4+ T cells identifies PSGL-1 as an HIV restriction factor.
). Vpu-mediated down-regulation of CD4 and tetherin from the cell surface helps to protect HIV-1–infected cells from antibody-dependent cell-mediated cytotoxicity (
42- Haller C.
- Müller B.
- Fritz J.V.
- Lamas-Murua M.
- Stolp B.
- Pujol F.M.
- Keppler O.T.
- Fackler O.T.
HIV-1 Nef and Vpu are functionally redundant broad-spectrum modulators of cell surface receptors, including tetraspanins.
,
43- Hussain A.
- Wesley C.
- Khalid M.
- Chaudhry A.
- Jameel S.
Human immunodeficiency virus type 1 Vpu protein interacts with CD74 and modulates major histocompatibility complex class II presentation.
,
44- Lambelé M.
- Koppensteiner H.
- Symeonides M.
- Roy N.H.
- Chan J.
- Schindler M.
- Thali M.
Vpu is the main determinant for tetraspanin downregulation in HIV-1-infected cells.
,
46- Arias J.F.
- Heyer L.N.
- von Bredow B.
- Weisgrau K.L.
- Moldt B.
- Burton D.R.
- Rakasz E.G.
- Evans D.T.
Tetherin antagonism by Vpu protects HIV-infected cells from antibody-dependent cell-mediated cytotoxicity.
).
To better understand Vpu function and identify Vpu-interacting cellular proteins, we previously performed a yeast two-hybrid (Y2H) screen with HIV-1 Vpu as bait. We confirmed that small glutamine-rich tetratricopeptide repeat–containing protein α (SGTA) is a Vpu-binding protein (
47- Callahan M.A.
- Handley M.A.
- Lee Y.H.
- Talbot K.J.
- Harper J.W.
- Panganiban A.T.
Functional interaction of human immunodeficiency virus type 1 Vpu and Gag with a novel member of the tetratricopeptide repeat protein family.
,
48- Waheed A.A.
- MacDonald S.
- Khan M.
- Mounts M.
- Swiderski M.
- Xu Y.
- Ye Y.
- Freed E.O.
The Vpu-interacting protein SGTA regulates expression of a non-glycosylated tetherin species.
). Overexpression of SGTA impaired HIV-1 release independent of Vpu and tetherin expression (
47- Callahan M.A.
- Handley M.A.
- Lee Y.H.
- Talbot K.J.
- Harper J.W.
- Panganiban A.T.
Functional interaction of human immunodeficiency virus type 1 Vpu and Gag with a novel member of the tetratricopeptide repeat protein family.
,
48- Waheed A.A.
- MacDonald S.
- Khan M.
- Mounts M.
- Swiderski M.
- Xu Y.
- Ye Y.
- Freed E.O.
The Vpu-interacting protein SGTA regulates expression of a non-glycosylated tetherin species.
,
49Structural and functional characterization of human SGT and its interaction with Vpu of the human immunodeficiency virus type 1.
,
50- Handley M.A.
- Paddock S.
- Dall A.
- Panganiban A.T.
Association of Vpu-binding protein with microtubules and Vpu-dependent redistribution of HIV-1 Gag protein.
), whereas the depletion of SGTA had no significant effect on HIV-1 release or Vpu-mediated tetherin degradation (
48- Waheed A.A.
- MacDonald S.
- Khan M.
- Mounts M.
- Swiderski M.
- Xu Y.
- Ye Y.
- Freed E.O.
The Vpu-interacting protein SGTA regulates expression of a non-glycosylated tetherin species.
). Further, we reported that overexpression of SGTA in the presence of Vpu induced a marked stabilization and cytosolic accumulation of the nonglycosylated form of tetherin. This accumulation of nonglycosylated tetherin in the presence of SGTA was due to inhibition of its degradation, partly due to a block in the translocation of tetherin across the endoplasmic reticulum membrane resulting in tetherin accumulation in the cytosol (
48- Waheed A.A.
- MacDonald S.
- Khan M.
- Mounts M.
- Swiderski M.
- Xu Y.
- Ye Y.
- Freed E.O.
The Vpu-interacting protein SGTA regulates expression of a non-glycosylated tetherin species.
). The C terminus of SGTA, the membrane-proximal basic residues of Vpu, and the transmembrane domain of human tetherin are required for SGTA-mediated stabilization of nonglycosylated tetherin (
48- Waheed A.A.
- MacDonald S.
- Khan M.
- Mounts M.
- Swiderski M.
- Xu Y.
- Ye Y.
- Freed E.O.
The Vpu-interacting protein SGTA regulates expression of a non-glycosylated tetherin species.
).
In this study, we report the V0 subunit C of vacuolar ATPase (ATP6V0C) as another Vpu-interacting protein identified in our Y2H screen. The vacuolar H
+-ATPase (V-ATPase) is a large, membrane-associated, multisubunit enzyme complex that functions as an ATP-dependent proton pump that acidifies intracellular compartments such as endosomes, lysosomes, Golgi-derived vesicles, clathrin-coated vesicles, synaptic vesicles, multivesicular bodies, and secretory vesicles (reviewed in Refs.
51Vacuolar ATPases: rotary proton pumps in physiology and pathophysiology.
,
52The where, when, and how of organelle acidification by the yeast vacuolar H+-ATPase.
,
53The vacuolar (H+)-ATPases—nature's most versatile proton pumps.
). Acidification of vacuolar compartments plays an important role in several cellular processes, such as protein sorting, endocytosis, and macromolecular processing and degradation. The V-ATPase is composed of two domains: a cytoplasmic V1 domain and a transmembrane V0 domain. The V1 domain, which is responsible for ATP hydrolysis, is composed of eight subunits (A–H, in a stoichiometry of A
3B
3CDEFG
2H
1–2); the V0 subunit, which forms the H
+-transporting channel, is composed of five subunits (a, b, c, c′, and c″, in a stoichiometry of adc
4c′c″ (
54- Arai H.
- Terres G.
- Pink S.
- Forgac M.
Topography and subunit stoichiometry of the coated vesicle proton pump.
,
55- Powell B.
- Graham L.A.
- Stevens T.H.
Molecular characterization of the yeast vacuolar H+-ATPase proton pore.
,
56- Xu T.
- Vasilyeva E.
- Forgac M.
Subunit interactions in the clathrin-coated vesicle vacuolar (H+)-ATPase complex.
). ATP hydrolysis catalyzed by subunit V1 drives rotation of the D–F axle, which induces proton translocation across the membrane by rotating the ring of c subunits. ATP6V0C, a 16-kDa protein with four TM domains (
53The vacuolar (H+)-ATPases—nature's most versatile proton pumps.
), has been reported to form gap junctions (
57- Finbow M.E.
- Eliopoulos E.E.
- Jackson P.J.
- Keen J.N.
- Meagher L.
- Thompson P.
- Jones P.
- Findlay J.B.
Structure of a 16 kDa integral membrane protein that has identity to the putative proton channel of the vacuolar H+-ATPase.
,
58The gap junction-like form of a vacuolar proton channel component appears not to be an artifact of isolation: an immunocytochemical localization study.
) and interacts with a number of cellular and viral proteins independent of other V-ATPase subunits; these include β-integrin (
59- Skinner M.A.
- Wildeman A.G.
β1 integrin binds the 16-kDa subunit of vacuolar H+-ATPase at a site important for human papillomavirus E5 and platelet-derived growth factor signaling.
) and the bovine papillomavirus E5 oncoprotein (
60- Goldstein D.J.
- Finbow M.E.
- Andresson T.
- McLean P.
- Smith K.
- Bubb V.
- Schlegel R.
Bovine papillomavirus E5 oncoprotein binds to the 16K component of vacuolar H+-ATPases.
,
61- Goldstein D.J.
- Kulke R.
- Dimaio D.
- Schlegel R.
A glutamine residue in the membrane-associating domain of the bovine papillomavirus type 1 E5 oncoprotein mediates its binding to a transmembrane component of the vacuolar H+-ATPase.
). Knockdown of ATP6V0C induced a synergistic growth-inhibitory effect in the presence of a candidate anti-cancer therapeutic in colorectal cancer cells (
62- Kim B.K.
- Nam S.W.
- Min B.S.
- Ban H.S.
- Paik S.
- Lee K.
- Im J.Y.
- Lee Y.
- Park J.T.
- Kim S.Y.
- Kim M.
- Lee H.
- Won M.
Bcl-2-dependent synthetic lethal interaction of the IDF-11774 with the V0 subunit C of vacuolar ATPase (ATP6V0C) in colorectal cancer.
) and attenuated proliferation, invasion, and glucose metabolism in esophageal cancer cells (
63- Son S.W.
- Chau G.C.
- Kim S.T.
- Um S.H.
Vacuolar H+-ATPase subunit V0C regulates aerobic glycolysis of esophageal cancer cells via PKM2 signaling.
). Bafilomycin A1, an inhibitor of V-ATPase activity, binds ATP6V0C and inhibits proton translocation into the lysosomal lumen, thus inhibiting lysosomal acidification and cargo degradation (
64- Ohkuma S.
- Shimizu S.
- Noto M.
- Sai Y.
- Kinoshita K.
- Tamura H.
Inhibition of cell growth by bafilomycin A1, a selective inhibitor of vacuolar H+-ATPase.
). Inhibition of endosomal acidification by bafilomycin A1 abolished the infection of several viruses, such as dengue virus (
65- Ho M.R.
- Tsai T.T.
- Chen C.L.
- Jhan M.K.
- Tsai C.C.
- Lee Y.C.
- Chen C.H.
- Lin C.F.
Blockade of dengue virus infection and viral cytotoxicity in neuronal cells in vitro in vivo by targeting endocytic pathways.
), Zika virus (
66- Sabino C.
- Basic M.
- Bender D.
- Elgner F.
- Himmelsbach K.
- Hildt E.
Bafilomycin A1 and U18666A efficiently impair ZIKV infection.
), human papillomavirus (
67- Müller K.H.
- Spoden G.A.
- Scheffer K.D.
- Brunnhöfer R.
- De Brabander J.K.
- Maier M.E.
- Florin L.
- Muller C.P.
Inhibition by cellular vacuolar ATPase impairs human papillomavirus uncoating and infection.
), rhinovirus (
68- Suzuki T.
- Yamaya M.
- Sekizawa K.
- Hosoda M.
- Yamada N.
- Ishizuka S.
- Nakayama K.
- Yanai M.
- Numazaki Y.
- Sasaki H.
Bafilomycin A1 inhibits rhinovirus infection in human airway epithelium: effects on endosome and ICAM-1.
), equine infectious anemia virus (
69- Jin S.
- Zhang B.
- Weisz O.A.
- Montelaro R.C.
Receptor-mediated entry by equine infectious anemia virus utilizes a pH-dependent endocytic pathway.
), murine leukemia virus (
70- Katen L.J.
- Januszeski M.M.
- Anderson W.F.
- Hasenkrug K.J.
- Evans L.H.
Infectious entry by amphotropic as well as ecotropic murine leukemia viruses occurs through an endocytic pathway.
), and influenza A virus (
71- Li B.
- Clohisey S.M.
- Chia B.S.
- Wang B.
- Cui A.
- Eisenhaure T.
- Schweitzer L.D.
- Hoover P.
- Parkinson N.J.
- Nachshon A.
- Smith N.
- Regan T.
- Farr D.
- Gutmann M.U.
- Bukhari S.I.
- et al.
Genome-wide CRISPR screen identifies host dependency factors for influenza A virus infection.
,
72- Marjuki H.
- Gornitzky A.
- Marathe B.M.
- Ilyushina N.A.
- Aldridge J.R.
- Desai G.
- Webby R.J.
- Webster R.G.
Influenza A virus-induced early activation of ERK and PI3K mediates V-ATPase-dependent intracellular pH change required for fusion.
,
73- Müller K.H.
- Kainov D.E.
- El Bakkouri K.
- Saelens X.
- De Brabander J.K.
- Kittel C.
- Samm E.
- Muller C.P.
The proton translocation domain of cellular vacuolar ATPase provides a target for the treatment of influenza A virus infections.
).
In this study, we investigated the role of ATP6V0C in Vpu-mediated tetherin degradation and HIV-1 release. Because ATP6V0C is involved in lysosomal degradation and Vpu promotes the lysosomal degradation of tetherin, we investigated the effect of ATP6V0C depletion on HIV-1 particle production in the presence and absence of Vpu. We observed that knockdown of ATP6V0C in HeLa cells impairs Vpu-mediated tetherin degradation, thereby inhibiting HIV-1 release. We also observed that overexpression of ATP6V0C resulted in the stabilization of tetherin expression by inducing its sequestration in CD63- and LAMP1-enriched intracellular compartments. Our results demonstrate that the Vpu-interacting protein ATP6V0C plays a role in Vpu-mediated tetherin degradation and HIV-1 release.
Discussion
We identified SGTA and ATP6V0C as Vpu-interacting proteins in a Y2H screen. In this study, we confirmed the interaction between Vpu and ATP6V0C using co-immunoprecipitation assays. Although in our earlier study, siRNA-mediated depletion of SGTA had no significant effect on the release of either WT or Vpu-defective HIV-1 in tetherin-expressing HeLa cells, overexpression of SGTA interfered with HIV-1 release in a Vpu- and tetherin-independent manner (
48- Waheed A.A.
- MacDonald S.
- Khan M.
- Mounts M.
- Swiderski M.
- Xu Y.
- Ye Y.
- Freed E.O.
The Vpu-interacting protein SGTA regulates expression of a non-glycosylated tetherin species.
). In this study, we observe that overexpression of ATP6V0C has no significant effect on HIV-1 release, whereas knockdown of ATP6V0C in HeLa cells, but not in tetherin-negative 293T cells, inhibits the release of both Vpu(+) and Vpu(−) HIV-1. The inhibition of virus release mediated by ATP6V0C depletion in HeLa cells is rescued by knockdown of endogenous tetherin, indicating that the inhibition of HIV-1 release upon knockdown of ATP6V0C is mediated by tetherin. Further, we observe that ATP6V0C depletion in HeLa cells results in elevated levels of endogenous tetherin independent of Vpu expression, indicating that endogenous ATP6V0C is required not only for Vpu-mediated tetherin degradation but also for normal tetherin turnover. We and others have reported that Vpu induces the degradation of tetherin by both proteasomal (
80- Goffinet C.
- Allespach I.
- Homann S.
- Tervo H.M.
- Habermann A.
- Rupp D.
- Oberbremer L.
- Kern C.
- Tibroni N.
- Welsch S.
- Krijnse-Locker J.
- Banting G.
- Kräusslich H.G.
- Fackler O.T.
- Keppler O.T.
HIV-1 antagonism of CD317 is species specific and involves Vpu-mediated proteasomal degradation of the restriction factor.
,
81- Gupta R.K.
- Hué S.
- Schaller T.
- Verschoor E.
- Pillay D.
- Towers G.J.
Mutation of a single residue renders human tetherin resistant to HIV-1 Vpu-mediated depletion.
,
82- Mangeat B.
- Gers-Huber G.
- Lehmann M.
- Zufferey M.
- Luban J.
- Piguet V.
HIV-1 Vpu neutralizes the antiviral factor Tetherin/BST-2 by binding it and directing its β-TrCP2-dependent degradation.
,
83- Waheed A.A.
- Kuruppu N.D.
- Felton K.L.
- D'Souza D.
- Freed E.O.
In COS cells Vpu can both stabilize tetherin expression and counteract its antiviral activity.
) and lysosomal (
75- Iwabu Y.
- Fujita H.
- Kinomoto M.
- Kaneko K.
- Ishizaka Y.
- Tanaka Y.
- Sata T.
- Tokunaga K.
HIV-1 accessory protein Vpu internalizes cell-surface BST-2/tetherin through transmembrane interactions leading to lysosomes.
,
83- Waheed A.A.
- Kuruppu N.D.
- Felton K.L.
- D'Souza D.
- Freed E.O.
In COS cells Vpu can both stabilize tetherin expression and counteract its antiviral activity.
,
84- Douglas J.L.
- Viswanathan K.
- McCarroll M.N.
- Gustin J.K.
- Früh K.
- Moses A.V.
Vpu directs the degradation of the human immunodeficiency virus restriction factor BST-2/Tetherin via a βTrCP-dependent mechanism.
) pathways. Because ATP6V0C regulates vesicular acidification required for lysosomal degradation (
51Vacuolar ATPases: rotary proton pumps in physiology and pathophysiology.
,
52The where, when, and how of organelle acidification by the yeast vacuolar H+-ATPase.
,
53The vacuolar (H+)-ATPases—nature's most versatile proton pumps.
), we suggest that ATPV0C is essential for Vpu-mediated lysosomal tetherin degradation to promote HIV-1 release. It will be interesting to study the effect of ATP6V0C knockdown on the release of other viruses that are inhibited by tetherin.
We observed that ATP6V0C overexpression results in the accumulation of tetherin by preventing its degradation and that this accumulation is Vpu-independent. Overexpression of another subunit of the V-ATPase, ATP6V0C″, has only a small effect on tetherin expression compared with ATP6V0C, indicating that tetherin stabilization is specific to ATP6V0C. Further, the ATP6V0C-mediated stabilization is specific to tetherin, as overexpression of ATP6V0C did not stabilize the Vpu-down-regulated protein CD4 or interfere with its Vpu-mediated down-regulation. Overexpression of ATP6V0C reduced the expression of CD4 and TR, both of which undergo lysosomal degradation (
38- Chen M.Y.
- Maldarelli F.
- Karczewski M.K.
- Willey R.L.
- Strebel K.
Human immunodeficiency virus type 1 Vpu protein induces degradation of CD4 in vitro: the cytoplasmic domain of CD4 contributes to Vpu sensitivity.
,
39- Schubert U.
- Antón L.C.
- Bacík I.
- Cox J.H.
- Bour S.
- Bennink J.R.
- Orlowski M.
- Strebel K.
- Yewdell J.W.
CD4 glycoprotein degradation induced by human immunodeficiency virus type 1 Vpu protein requires the function of proteasomes and the ubiquitin-conjugating pathway.
,
40- Willey R.L.
- Maldarelli F.
- Martin M.A.
- Strebel K.
Human immunodeficiency virus type 1 Vpu protein induces rapid degradation of CD4.
). Treating ATP6V0C-overexpressing cells with the lysosomal inhibitor bafilomycin, which specifically targets the ATP6V0C subunit and prevents lysosomal degradation (
64- Ohkuma S.
- Shimizu S.
- Noto M.
- Sai Y.
- Kinoshita K.
- Tamura H.
Inhibition of cell growth by bafilomycin A1, a selective inhibitor of vacuolar H+-ATPase.
), further increased tetherin expression. Overexpression of ATP6V0C reduced the expression of Vpu, which could be rescued by treating cells with bafilomycin, indicating that ATP6V0C overexpression leads to degradation of Vpu through the lysosomal pathway. These results indicate that overexpression of ATP6V0C does not exert a dominant-negative effect on lysosomal function. Our co-immunoprecipitation assays demonstrate that Vpu, ATP6V0C, and tetherin interact independently of one another. Together, these results suggest that the interaction of overexpressed ATP6V0C with tetherin prevents its degradation, leading to its accumulation. Using deletion and point mutants, we determined that the cytoplasmic tail, GPI-anchor, and dimerization of tetherin are essential for ATP6V0C-mediated tetherin stabilization. Immunofluorescence localization studies showed that the ATP6V0C-stabilized tetherin is sequestered in CD63- and LAMP1-enriched intracellular compartments, whereas tetherin mutants that are not stabilized by ATP6V0C are not sequestered in these internal compartments. The observation that ATP6V0C increases tetherin levels without affecting HIV-1 release is explained by the intracellular sequestration of ATP6V0C-stabilized tetherin; this stabilized tetherin is not available to inhibit particle release at the plasma membrane.
The basis for the interaction between Vpu and ATP6V0C remains unclear. Vpu could have evolved an interaction with ATP6V0C to antagonize the activity of the V-ATPase or to promote its activity in degrading Vpu target proteins. Because ATP6V0C is a pore-forming and proton-conducting subunit of the V-ATPase, we initially anticipated that the interaction of Vpu with overexpressed ATP6V0C might facilitate Vpu-mediated tetherin degradation. However, we observed that overexpression of ATP6V0C resulted in the accumulation, rather than lysosomal degradation, of tetherin. Although overexpression of ATP6V0C increases the levels of tetherin, this effect is independent of Vpu. Interactions between virally encoded factors and ATP6V0C or other V-ATPase subunits have been reported in other systems. For example, a direct interaction between bovine and human papillomavirus protein E5 and ATP6V0C has been reported (
60- Goldstein D.J.
- Finbow M.E.
- Andresson T.
- McLean P.
- Smith K.
- Bubb V.
- Schlegel R.
Bovine papillomavirus E5 oncoprotein binds to the 16K component of vacuolar H+-ATPases.
,
85- Di Domenico F.
- Foppoli C.
- Blarzino C.
- Perluigi M.
- Paolini F.
- Morici S.
- Coccia R.
- Cini C.
- De Marco F.
Expression of human papilloma virus type 16 E5 protein in amelanotic melanoma cells regulates endo-cellular pH and restores tyrosinase activity.
). Although several studies have demonstrated that E5 disrupts acidification of endosomes (
86- Disbrow G.L.
- Hanover J.A.
- Schlegel R.
Endoplasmic reticulum-localized human papillomavirus type 16 E5 protein alters endosomal pH but not trans-Golgi pH.
,
87- Straight S.W.
- Herman B.
- McCance D.J.
The E5 oncoprotein of human papillomavirus type 16 inhibits the acidification of endosomes in human keratinocytes.
,
88- Thomsen P.
- van Deurs B.
- Norrild B.
- Kayser L.
The HPV16 E5 oncogene inhibits endocytic trafficking.
), this activity appears to be independent of E5-ATP6V0C binding (
89- Suprynowicz F.A.
- Krawczyk E.
- Hebert J.D.
- Sudarshan S.R.
- Simic V.
- Kamonjoh C.M.
- Schlegel R.
The human papillomavirus type 16 E5 oncoprotein inhibits epidermal growth factor trafficking independently of endosome acidification.
). A human cytomegalovirus (hCMV) microRNA has been found to target ATP6V0C (
90- Pavelin J.
- Reynolds N.
- Chiweshe S.
- Wu G.
- Tiribassi R.
- Grey F.
Systematic microRNA analysis identifies ATP6V0C as an essential host factor for human cytomegalovirus replication.
), which, paradoxically, is required for efficient hCMV virus assembly in culture (
91- Pavelin J.
- McCormick D.
- Chiweshe S.
- Ramachandran S.
- Lin Y.T.
- Grey F.
Cellular v-ATPase is required for virion assembly compartment formation in human cytomegalovirus infection.
). Why hCMV would target for degradation a host protein required for its replication has not been elucidated. The nonstructural protein 3A of enterovirus 71 (EV71) interacts with ATP6V0C, and this interaction is critical for EV71 replication, as knockdown of ATP6V0C or treating cells with bafilomycin inhibits propagation of EV71 (
92- Han L.
- Li K.
- Jin C.
- Wang J.
- Li Q.
- Zhang Q.
- Cheng Q.
- Yang J.
- Bo X.
- Wang S.
Human enterovirus 71 protein interaction network prompts antiviral drug repositioning.
). Dengue virus premembrane (prM) protein interacts with V-ATPase, and this interaction is essential for both entry and egress of dengue virus (
93- Duan X.
- Lu X.
- Li J.
- Liu Y.
Novel binding between pre-membrane protein and vacuolar ATPase is required for efficient dengue virus secretion.
). HIV-1 and SIV Nef have been reported to interact with the H subunit of the V-ATPase, thereby connecting Nef and the endocytosis machinery required for Nef-mediated CD4 down-regulation (
94- Geyer M.
- Yu H.
- Mandic R.
- Linnemann T.
- Zheng Y.H.
- Fackler O.T.
- Peterlin B.M.
Subunit H of the V-ATPase binds to the medium chain of adaptor protein complex 2 and connects Nef to the endocytic machinery.
,
95- Lu X.
- Yu H.
- Liu S.H.
- Brodsky F.M.
- Peterlin B.M.
Interactions between HIV1 Nef and vacuolar ATPase facilitate the internalization of CD4.
,
96- Mandic R.
- Fackler O.T.
- Geyer M.
- Linnemann T.
- Zheng Y.H.
- Peterlin B.M.
Negative factor from SIV binds to the catalytic subunit of the V-ATPase to internalize CD4 and to increase viral infectivity.
). Finally, HTLV-1 p12I has been reported to interact with ATP6V0C (
97- Franchini G.
- Mulloy J.C.
- Koralnik I.J.
- Lo Monico A.
- Sparkowski J.J.
- Andresson T.
- Goldstein D.J.
- Schlegel R.
The human T-cell leukemia/lymphotropic virus type I p12I protein cooperates with the E5 oncoprotein of bovine papillomavirus in cell transformation and binds the 16-kilodalton subunit of the vacuolar H+ ATPase.
,
98- Koralnik I.J.
- Mulloy J.C.
- Andresson T.
- Fullen J.
- Franchini G.
Mapping of the intermolecular association of human T cell leukaemia/lymphotropic virus type I p12I and the vacuolar H+-ATPase 16 kDa subunit protein.
); the implications of this interaction remain to be defined.
In the course of this study, we also observed that the Vpu-target protein, tetherin, interacts with ATP6V0C. As a consequence of this interaction, overexpression of ATP6V0C leads to the stabilization of tetherin and the sequestration of tetherin in an internal compartment that contains CD63 and LAMP-1. Variants of tetherin that are not stabilized by ATP6V0C fail to relocalize to the internal compartment. Whereas ATP6V0C overexpression stabilizes tetherin, it causes a reduction in the levels of TR and CD4, two proteins that undergo lysosomal degradation. These results suggest that the stabilization of tetherin by ATP6V0C overexpression is a result of the (direct or indirect) interaction between tetherin and ATP6V0C and is not a consequence of global disruption of lysosomal activity.
Two Vpu-interacting proteins, SGTA and ATP6V0C, have differential effects on tetherin expression and HIV-1 release. As shown here, the knockdown of ATP6V0C impairs Vpu-mediated tetherin degradation, thus inhibiting HIV-1 release. In contrast, knockdown of SGTA has no effect on endogenous tetherin expression or HIV-1 release (
48- Waheed A.A.
- MacDonald S.
- Khan M.
- Mounts M.
- Swiderski M.
- Xu Y.
- Ye Y.
- Freed E.O.
The Vpu-interacting protein SGTA regulates expression of a non-glycosylated tetherin species.
). Overexpression of SGTA but not ATP6V0C inhibits HIV-1 release (
48- Waheed A.A.
- MacDonald S.
- Khan M.
- Mounts M.
- Swiderski M.
- Xu Y.
- Ye Y.
- Freed E.O.
The Vpu-interacting protein SGTA regulates expression of a non-glycosylated tetherin species.
). Whereas overexpression of ATP6V0C sequesters tetherin in CD63– and LAMP-1–containing internal compartments, overexpression of SGTA stabilizes a nonglycosylated, 23-kDa tetherin species that localizes to the cytosol (
48- Waheed A.A.
- MacDonald S.
- Khan M.
- Mounts M.
- Swiderski M.
- Xu Y.
- Ye Y.
- Freed E.O.
The Vpu-interacting protein SGTA regulates expression of a non-glycosylated tetherin species.
). The cytoplasmic tail, GPI-anchor, and dimerization of human tetherin are required for ATP6V0C-mediated tetherin stabilization, whereas the transmembrane domain of human tetherin is required for the SGTA-mediated increase in 23-kDa tetherin expression. These observations indicate that these two Vpu-interacting proteins differentially regulate tetherin expression and HIV-1 release.
Further investigation will be required to decipher the functional significance of the Vpu-ATP6V0C interaction. We speculate that Vpu interactions with the lysosomal protein ATP6V0C and with tetherin could facilitate Vpu-mediated lysosomal degradation of tetherin. Also of interest for future studies will be the identification of ATP6V0C domains involved in Vpu-ATP6V0C interaction, although the highly transmembrane topology of ATP6V0C (
53The vacuolar (H+)-ATPases—nature's most versatile proton pumps.
) could complicate such an analysis.
In summary, in this report, we show that overexpressed ATP6V0C interacts with tetherin and stabilizes its expression by preventing its degradation and inducing its sequestration in intracellular compartments. In contrast, endogenous ATP6V0C is required for both normal turnover of tetherin and its Vpu-mediated degradation. These results demonstrate that the Vpu-interacting protein ATP6V0C regulates the expression of tetherin, thereby modulating HIV-1 release.
Experimental procedures
Plasmids, antibodies, and chemicals
Vectors expressing C-terminally FLAG-tagged ATP6V0C and ATP6V0C″ were obtained from OriGene Technologies Inc. (Rockville, MD). The pcDNA-Vphu vector, bearing the codon-optimized
vpu gene, was used for expressing Vpu (
99- Nguyen K.L.
- llano M.
- Akari H.
- Miyagi E.
- Poeschla E.M.
- Strebel K.
- Bour S.
Codon optimization of the HIV-1 vpu and vif genes stabilizes their mRNA and allows for highly efficient Rev-independent expression.
). The full-length, infectious HIV-1 molecular clone pNL4-3 and the Vpu-defective counterpart pNL4-3delVpu were described previously (
35- Strebel K.
- Klimkait T.
- Martin M.A.
A novel gene of HIV-1, vpu, and its 16-kilodalton product.
,
100- Adachi A.
- Gendelman H.E.
- Koenig S.
- Folks T.
- Willey R.
- Rabson A.
- Martin M.A.
Production of acquired immunodeficiency syndrome-associated retrovirus in human and nonhuman cells transfected with an infectious molecular clone.
). pNL4-3delVpu and pcDNA-Vphu were kindly provided by K. Strebel. Vectors expressing N-terminally HA-tagged human tetherin, the deletion mutant derivatives delCT and delGPI, tetherin from African green monkey (Agm) and Rhesus (Rh), and chimeric human tetherin with transmembrane domains from Agm (Hu-Agm) or Rh (Hu-Rh) were described previously (
5- Neil S.J.
- Zang T.
- Bieniasz P.D.
Tetherin inhibits retrovirus release and is antagonized by HIV-1 Vpu.
,
32- McNatt M.W.
- Zang T.
- Hatziioannou T.
- Bartlett M.
- Fofana I.B.
- Johnson W.E.
- Neil S.J.
- Bieniasz P.D.
Species-specific activity of HIV-1 Vpu and positive selection of tetherin transmembrane domain variants.
) and were generously provided by P. Bieniasz. The nonglycosylated (NN) and nondimerizing (CCC) tetherin mutants have been described previously (
48- Waheed A.A.
- MacDonald S.
- Khan M.
- Mounts M.
- Swiderski M.
- Xu Y.
- Ye Y.
- Freed E.O.
The Vpu-interacting protein SGTA regulates expression of a non-glycosylated tetherin species.
). The CD4 expression vector pMX-CD4 and the TR expression vector pMD18-T TR were from Addgene (Watertown, MA) and Sino Biological Inc. (Wayne, PA), respectively. Anti-FLAG, anti-HA, and anti-tubulin antibodies and anti-HA– and anti-FLAG–conjugated agarose beads were purchased from Sigma. The following siRNAs targeting human genes were obtained: ATPV0C from Santa Cruz Biotechnology, Inc. (Dallas, TX) or OriGene Technologies Inc., tetherin from Qiagen (Germantown, MD), and nontargeting control-siRNA from Dharmacon Inc. (Chicago, IL) (now part of Horizon Discovery). Anti-human TR antibody was purchased from Zymed Laboratories Inc. (San Francisco, CA), anti-CD4 and anti-CD63 antibodies were from Santa Cruz Biotechnology, and anti-LAMP-1 was from BD Biosciences. Bafilomycin was obtained from Tocris Bioscience (Minneapolis, MN). Zenon antibody labeling kits and the Alexa Fluor 488–, 594–, and 647–conjugated secondary antibodies were from Invitrogen. Anti-Vpu (
34- Maldarelli F.
- Chen M.Y.
- Willey R.L.
- Strebel K.
Human immunodeficiency virus type 1 Vpu protein is an oligomeric type I integral membrane protein.
), anti-BST2 (
101- Miyagi E.
- Andrew A.J.
- Kao S.
- Strebel K.
Vpu enhances HIV-1 virus release in the absence of Bst-2 cell surface down-modulation and intracellular depletion.
), and anti-HIV-1 Ig were obtained from the National Institutes of Health AIDS Reagent Program.
Yeast two-hybrid screening
The yeast two-hybrid screen was carried out at Myriad Genetics (Salt Lake City, UT) as described previously (
48- Waheed A.A.
- MacDonald S.
- Khan M.
- Mounts M.
- Swiderski M.
- Xu Y.
- Ye Y.
- Freed E.O.
The Vpu-interacting protein SGTA regulates expression of a non-glycosylated tetherin species.
). Briefly, the PNY200 yeast strain expressing the Vpu-fused GAL4 DNA binding protein was mated with the BK100 yeast strain transformed with a prey cDNA library (isolated from brain, spleen, and macrophages). After mating, the cells were plated onto selective media, and the positive colonies were picked from the selection plates (
102Using the yeast two-hybrid system to identify interacting proteins.
). The prey plasmids were isolated from the positive colonies, and the prey inserts were identified by sequence analysis. The interactions were confirmed by transforming the bait and prey plasmids into naive yeast cells and monitoring the interactions by the chemiluminescent reporter gene assay system as described previously (
102Using the yeast two-hybrid system to identify interacting proteins.
).
Cell culture and transfection
293T and HeLa cell lines were maintained in Dulbecco's modified Eagle's medium (DMEM) containing 10 or 5% fetal bovine serum (FBS), respectively. One day after plating, cells were transfected with appropriate plasmid DNA using Lipofectamine 2000 (Invitrogen) according to the manufacturer's recommendations. Twenty-four h post-transfection, virions were pelleted in an ultracentrifuge, and cell and virus pellets were lysed and used for further analysis. In bafilomycin treatment experiments, 8 h post-transfection, cells were either untreated or treated with bafilomycin for 18 h prior to cell lysis.
Immunoprecipitation and Western blotting
For co-immunoprecipitation assays, 293T cells were transfected with FLAG-tagged ATP6V0C in the absence and presence of vectors expressing Vpu and human tetherin. After 24–30 h post-transfection, cells were lysed in 0.5% IGEPAL, and immunoprecipitations were performed with agarose beads conjugated with anti-FLAG, anti-Vpu, or anti-HA antibodies. After overnight incubation, complexes were washed with 0.1% IGEPAL, and both cell lysates and immunoprecipitated samples were subjected to immunoblotting with anti-FLAG, anti-Vpu, and anti-HA antibodies. For immunoblot analyses, cell and virus pellets were lysed in a buffer containing 50 mm Tris-HCl (pH 7.4), 150 mm NaCl, 1 mm EDTA, 0.5% Triton X-100, and protease inhibitor mixture (Roche Life Science, Basel, Switzerland). Proteins were denatured by boiling in sample buffer and subjected to SDS-PAGE, transferred to polyvinylidene difluoride membrane, blocked with 5% milk, and incubated with appropriate antibodies as described in figure legends. Membranes were then incubated with HRP-conjugated secondary antibodies, and chemiluminescence signal was detected by using West Pico or West Femto Chemiluminescence Reagent (Thermo Scientific, Waltham, MA). The protein bands were quantified by using Imagelab-Chemidoc (Bio-Rad).
Virus release assays
One day after plating, 293T cells were transfected with WT or Vpu-defective pNL4-3 molecular clones in the absence and presence of ATP6V0C and tetherin expression vectors. One day post-transfection, virions were pelleted in an ultracentrifuge, and cell and virus pellets were lysed (
103- Waheed A.A.
- Ablan S.D.
- Mankowski M.K.
- Cummins J.E.
- Ptak R.G.
- Schaffner C.P.
- Freed E.O.
Inhibition of HIV-1 replication by amphotericin B methyl ester: selection for resistant variants.
). To knock down ATP6V0C in HeLa and 293T cells and tetherin in HeLa cells, 1 day after plating, cells were transfected with 50 n
m nontarget or ATP6V0C or tetherin siRNA with Oligofectamine transfection reagent (Invitrogen) in serum-free DMEM. After 6–7 h, DMEM containing 15% FBS was added, and cells were cultured overnight. The next day, cells were infected with VSVG-pseudotyped WT or Vpu-defective HIV-1; after 8 h, the medium was changed, and the siRNA transfection was repeated. Two days later, virions were pelleted in an ultracentrifuge, and cell and viral pellets were lysed as above. Viral proteins in cell and virus lysates were immunoblotted with HIV-Ig (
48- Waheed A.A.
- MacDonald S.
- Khan M.
- Mounts M.
- Swiderski M.
- Xu Y.
- Ye Y.
- Freed E.O.
The Vpu-interacting protein SGTA regulates expression of a non-glycosylated tetherin species.
), and virus release efficiency was calculated as the amount of virion-associated p24 as a fraction of total (cell-associated p24 and Pr55 plus virion-associated p24) Gag.
Pulse-chase analysis
293T cells were transfected with HA-tagged human tetherin in the absence and presence of ATP6V0C expression vector. One day post-transfection, cells were pulse-labeled with [
35S]Met-Cys for 30 min and washed with DMEM containing 10% FBS and removed from the dish in the same medium. Cells were split into five equal parts and incubated for 0, 0.5, 1, 2, or 4 h. Cells were spun down after the indicated incubation time and lysed in 0.5% IGEPAL-containing lysis buffer. The cell lysates were subjected to immunoprecipitation with anti-HA antibody-tagged beads overnight, washed, and analyzed by SDS-PAGE followed by fluorography (
104Evidence for a functional interaction between the V1/V2 and C4 domains of human immunodeficiency virus type 1 envelope glycoprotein gp120.
).
Immunofluorescence microscopy
For microscopy studies, 293T cells were cultured in chamber slides. One day after plating, cells were transfected with human tetherin expression vector in the absence or presence of ATP6V0C expression vector. After 24 h, cells were rinsed with PBS and fixed with 3.7% paraformaldehyde in PBS for 30 min. The cells were rinsed with PBS three times, permeabilized with methanol at 20 °C for 4 min, washed in PBS, and incubated with 0.1 m glycine-PBS for 10 min to quench the remaining aldehyde residues. After blocking with 3% BSA-PBS for 30 min, cells were incubated with anti-HA and anti-FLAG antibodies diluted in 3% BSA-PBS for 1 h. The cells were washed with PBS three times and then incubated with secondary antibody conjugated with Alexa Fluor 488 and Alexa Fluor 594 diluted in 3% BSA-PBS for 1 h to label anti-HA and anti-FLAG, respectively. In triple antibody staining experiments, cells were first incubated with anti-FLAG antibody diluted in 3% BSA-PBS for 1 h, and then cells were washed with PBS three times and then incubated with secondary antibody conjugated with Alexa Fluor 647 diluted in 3% BSA-PBS. After washing with PBS three times, cells were incubated with Zenon Alexa Fluor 488–labeled anti-HA and Zenon Alexa Fluor 594-labeled anti-CD63 or anti-LAMP-1 for 1 h. Finally, after washing with PBS three times, cells were mounted with Vectashield mounting medium with 4′,6-diamidino-2-phenylindole (Vector Laboratories) and examined with a Delta-Vision RT microscope.
Article info
Publication history
Published online: April 14, 2020
Received in revised form:
April 9,
2020
Received:
February 28,
2020
Edited by Craig E. Cameron
Footnotes
This work was supported by the Intramural Research Program of the Center for Cancer Research, NCI, National Institutes of Health. The authors declare that they have no conflicts of interest with the contents of this article. The content is solely the responsibility of the authors and does not necessarily represent the official views of the National Institutes of Health.
This article contains Fig. S1.